Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq7548 150 2e-31 >seq7548 Length=2633 Score = 150 bits (166), Expect = 2e-31 Identities = 478/729 (66%), Gaps = 24/729 (3%) Strand=Plus/Minus Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757 |||||| |||| ||||||| ||| | |||||||| | ||| | ||||| | ||||| Sbjct 1871 TCTTCTTTGGTAAATGTTTGATGTAAAGGGTTCAAAAGACTCAGTGTTACCAAGAATTTG 1812 Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTT 110817 ||| || ||||| |||||||| || || | ||| ||| || || | ||| | | || Sbjct 1811 TGCTGTAGAGGCGGTTGGCATAGGAGCTAACAATAGAGAATTGCGCAAACCATGTT--TT 1754 Query 110818 G--ATGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTG-GTTTCACCTTCCCAC 110872 | || ||| ||||| || ||||||| | ||| | | |||| |||||| Sbjct 1753 GCTATTTTTTCTTTGAGGGCAGCCCAGTCCCACAGTTCCGTAGGAGTTTTG---TCCCAC 1697 Query 110873 ATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCT 110932 || ||| | || || | |||||| | | ||| || ||| | || || | |||| Sbjct 1696 ATATCATATTGTAGGATACCTTGGCTCACTGGACTCCCTTCATAAGTACTGTATGCACCT 1637 Query 110933 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 110992 | ||| || |||||||| || || || | | | | ||| || |||||||| || Sbjct 1636 TCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATAGTTTCAAATATT 1577 Query 110993 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATAC 111051 | ||| | | |||| || || | | ||| || ||| | |||| Sbjct 1576 TGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAG-GTATTCTCATCAACACAAATGT 1518 Query 111052 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 111111 ||| || | || |||||||| | ||| ||||| | ||| |||||| || || || Sbjct 1517 ATCTGCCATTCCCTGAACACCAATACCGATAGGCCGGTGCTTCATATTTGAAGTTTTTGC 1458 Query 111112 AGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 111168 ||| || |||||||| || ||||||||| ||||| ||||| || ||||| Sbjct 1457 T---TCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTGACAAT 1401 Query 111169 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT 111228 ||||||||||| | | ||||| | ||| ||| ||| | | |||| ||| || | Sbjct 1400 TTTTGTGATTTCTTTTAATTTTTTAAAAT-TAAATTGC--TTATGTTCA---ACAAACAT 1347 Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288 ||| || || || || | |||||| || ||| ||||| | ||||| | | Sbjct 1346 GTTAAGTGCTATGGAAGCAAGATTGCATACTGCCACTTCATCTTCTGAAGTGTATTGCAC 1287 Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348 || || || || | ||| || ||||| || || | ||||||||| ||||||||| | Sbjct 1286 AACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTCTTTTGATTACTCTTCCT 1227 Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||| || |||||||| || | |||||| || || || |||||| || | || | ||| Sbjct 1226 GTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAAT 1167 Query 111409 AGCCTTCCA 111417 | |||||| Sbjct 1166 TGACTTCCA 1158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 625239290853600