Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq7548 98.7 1e-15 >seq7548 Length=2633 Score = 98.7 bits (108), Expect = 1e-15 Identities = 205/300 (68%), Gaps = 8/300 (3%) Strand=Plus/Minus Query 118593 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 118652 || |||||||| || ||| || || | |||| ||||| ||||||| ||||||||| Sbjct 1450 ACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTGACAATTTTTGTGATT 1391 Query 118653 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 118712 || | | |||| ||| ||| ||| | | |||| ||| || | ||| || Sbjct 1390 TCTTTTAATTTTTTAAAATTAAAT-TGCT--TATGTTCA---ACAAACATGTTAAGTGCT 1337 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 || || || ||||| || || | ||||| | |||||| | | || || ||| Sbjct 1336 ATGGAAGCAAGATTGCATACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTG 1277 Query 118773 CACAAGTTTGA-ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 118831 || ||| ||| || ||||| ||||| | ||||||||||| ||| ||||||| || Sbjct 1276 CA-AAGATTGCTACATTTAATAGTGCCAAGATTCTTTTGATTACTCTTCCTGTTACAAGC 1218 Query 118832 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891 |||||| || | ||||||||| || || |||||| ||||| | | ||| | |||||| Sbjct 1217 ATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTTCCA 1158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615685165543960