Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq7548 120 4e-22 >seq7548 Length=2633 Score = 120 bits (132), Expect = 4e-22 Identities = 898/1436 (63%), Gaps = 55/1436 (4%) Strand=Plus/Plus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| || || ||||| | ||| | || |||| || ||||| || |||||||||||| Sbjct 483 GAAAGACCTCAACACATGCTAATGAGAGTCTCCATAGGCATTCACGGTGAAGACATTGAT 542 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 104334 || | | || || | | |||||| | | ||| || | || |||| || || Sbjct 543 AGTGCAATCAATACTTATAATATGATGTCAGAGAAATATTTT-ACACATGCAAGCCCTAC 601 Query 104335 CCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAA 104394 || ||| || | |||||| | || || | ||| ||||||||||| || | || Sbjct 602 ACTGTTCTCAGCAGCTACACCGCGGCCACAGCTTTCCTCCTGCTTCCTTATAGCTATGAA 661 Query 104395 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 104454 || || || | || || | || ||| | | | ||||| ||| || || | Sbjct 662 AGACGATAGCATTGAAGGCATTTTTGATACTTTAAAACAATGTGCTTTAATTTCTAAATC 721 Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514 ||||| || || || | || | ||| | |||||| | ||| ||| || Sbjct 722 TGCTGGTGGCATAGGTTTACATACACATTGCATCAGAGCCCAGGGTTCTTATATAGCTGG 781 Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 || ||||| ||| ||||| | | |||||| | | || | |||| || || | Sbjct 782 CACTAATGGGGTCTCAAATGGTCTAGTGCCAATGTTGAGAGTGTATAACAATACTGCCAG 841 Query 104575 CTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCAT 104630 |||||| |||||| ||| | || | || | | ||| | || | ||||| | Sbjct 842 ATATGTAGATCAAGGTGGAAA-CAAACGTCCCGGTGCATTTGCAATTTACTTAGAGCCTT 900 Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690 |||| || || || | |||||| | || || | ||| |||| | || || | Sbjct 901 GGCATGCAGACATATTTGAGTTCTTAGATTTAAGGAAGAACACAGGTAAGGAAGAAATGA 960 Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | | || || || | ||| | ||||| |||||||| || ||||| ||||| || Sbjct 961 GAGCTAGAGAACTGTTTTATGCTTTATGGATACCAGATCTGTTTATGAAAAGAGTAGAAA 1020 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTG 104809 || || |||| ||| | ||||| | | ||||||||| | || ||| || Sbjct 1021 AGGATGAAGTTTGGAGTCTAATGTGTCCTCATGACTGTCCTGGTCTCGCTGACTGCTATG 1080 Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG 104869 | ||||||||||||| || || | || || || ||||| || | | || Sbjct 1081 GA-GAGGAGTTTGAAGAACTATATGCCAAATATGAAAAAGAAAAACGATTTA-TAAAACA 1138 Query 104870 -GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 || |||| || | ||||| | ||| | | | ||| |||||||||||||| Sbjct 1139 AGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAGAAGCCCAAGTGGAGACTGGTACACC 1198 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 ||||||| | || || || || |||||| |||||||||||||||||| | || || Sbjct 1199 ATACATGTTGTATAAGGATGCTTGTAACAGGAAGAGTAATCAAAAGAATCTTGGCACTAT 1258 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 || || |||||| || || || | || ||| || ||||||| ||| || Sbjct 1259 TAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGT 1318 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACA-AAGACATTTG 105107 || || || || || || || || || || ||| || ||| ||| |||| Sbjct 1319 ATGCAATCTTGCTTCCATAGCACTTAACATGTTTGTTGA-------ACATAAGCAATTTA 1371 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 ||| | ||||| | | ||| | || |||| |||||| |||| |||||| ||| |||| Sbjct 1372 ATTTTAAAAAATTAAAAGAAATCACAAAAATTGTCACTCAAAATTTAAACAAAGTCATTG 1431 Query 105168 ATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 105224 || || ||||| || || ||| || | || ||||||| ||||| || | Sbjct 1432 ATGTTAACTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAATATGAAGCACCGGCCTA 1488 Query 105225 TTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATT 105284 | ||| | ||||||||||| | || ||| ||| | ||| | | | | || Sbjct 1489 TCGGTATTGGTGTTCAGGGAATGGCAGATACATT-----TGTGTTGATGAG-AATACCTT 1542 Query 105285 CCGACGAAGCGAAGGAAATCAATGC----------GCGCATATTTGAGACCATGTATCAC 105334 ||| ||| || |||| |||| | | |||||||| || || ||| | Sbjct 1543 ACGA--AAGTGA--GAAAGCAATACTCCTTAATCAACAAATATTTGAAACTATTTATTAT 1598 Query 105335 GCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 105394 | || | || || |||| || || ||||| || ||| |||| || | ||| Sbjct 1599 GGTGCATTAGAAGCTAGTTGTGAATTAGCAGAAAAAGAAGGTGCATACAGTACTTATGAA 1658 Query 105395 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG---AAGGTGAGACCAAG 105451 || ||||| ||||| | || |||| ||||||||||| || | || | Sbjct 1659 GGGAGTCCAGTGAGCCAAGGTATCCTACAATATGATATGTGGGACAAAACTCCTACGGAA 1718 Query 105452 CTTCACTACGACTGGGAAGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACA 105509 || | ||||||| || ||||| ||| || ||| | | ||| | || || Sbjct 1719 CT---GTGGGACTGGGCTGCCCTCAAAGAAAAAATAGCAA--AACATGGTTTGCGCAATT 1773 Query 105510 GTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 105569 ||| | | ||||| |||||||| ||||| || |||||||| | ||||| | ||| | Sbjct 1774 CTCTATTGTTAGCTCCTATGCCAACCGCCTCTACAGCACAAATTCTTGGTAACACTGAGT 1833 Query 105570 GCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTT 105625 |||||||||| || | ||||| || | |||||| | | | ||||| ||| Sbjct 1834 CTTTTGAACCCTTTACATCAAACATTTACCAAAGAAGAGTCTTATCTGGAGAATTT 1889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580667177746840