Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq54613 122 5e-23 seq37844 111 1e-19 seq2515 104 1e-17 seq32923 86.0 4e-12 seq10767 84.2 1e-11 >seq54613 Length=3623 Score = 122 bits (134), Expect = 5e-23 Identities = 171/235 (73%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| ||||||| || | ||| || || ||||||||| ||||| || || ||| Sbjct 2669 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAA 2610 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | ||||| | ||| || || ||||| || ||||| ||||| || || || Sbjct 2609 AGTGTACGGCCATCTTCTAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2550 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTC-GCTCTCCA 34657 | || ||||||||| ||| ||| | ||| || | ||| || || ||| || | Sbjct 2549 ATGCCTTCCTTGTCT-TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCT-TCAA 2492 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712 |||||| || || |||||||| || | ||||| |||||||||||||| ||||| Sbjct 2491 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTGACAAAAATCTGCATTTTGAT 2437 Score = 82.4 bits (90), Expect = 5e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| ||||| | || || || || ||| ||||||||| ||||| || || || Sbjct 3344 CCTCCTCGCAGACGGAGTACTAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCCGAT 3285 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || | ||||| ||||| || || || || || | ||||||||| || || || Sbjct 3284 AAGGTACGGCCATCTTCCAGTTGCTTGCCTGCGAAGATAAGACGCTGTTGATCTGGAGGA 3225 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | |||||||||||| |||||| Sbjct 3224 ATACCCTCCTTGTCTTGGATCTT 3202 >seq37844 Length=1442 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||| ||||| ||||| ||| ||||| ||||| || || || Sbjct 512 CCACCACGAAGACGAAGCACTAAATGCAGAGTAGACTCTTTTTGGATGTTGTAGTCAGAC 453 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| ||||| || || || || || | ||||||||| || || || Sbjct 452 AGGGTGCGGCCATCTTCTAGTTGCTTGCCTGCGAAGATAAGACGCTGTTGATCTGGGGGA 393 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || | ||||| | ||| ||||| | |||||| Sbjct 392 ATACCCTCCTTGTCTTGGATC-TTAGCCTTAACATTTTCAATAGTGTCGGCTGGCTCCAC 334 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || ||||| || || | || || |||||||||||||| Sbjct 333 CTCTAAAGTAATGGTTTTCCCAGTAAGTGTCTTAACAAAAATCTGCAT 286 >seq2515 Length=4501 Score = 104 bits (114), Expect = 1e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| |||| ||| | ||| | ||| |||||||||||||||||||| || Sbjct 3693 CCTCCGCGAAGTCGCAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTATAATCAGAC 3634 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||| || | ||||| || || ||||| ||||| || || || || ||||| || || Sbjct 3633 AATGTACGTCCATCTTCTAGCTGCTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTGGA 3574 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || ||||| ||| |||||| ||||| | ||| || || | ||||| Sbjct 3573 ATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATAGTATCAGAGGCTTCCACC 3514 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || |||||||| || | || || || ||||| ||||| Sbjct 3513 TCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 3467 >seq32923 Length=5192 Score = 86.0 bits (94), Expect = 4e-12 Identities = 123/171 (72%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 46826 GGATGGCCCGTCACTTTTATTAC-ACCCGAAGTGATGGCACGTAACGGATTTTATTATCT 46884 |||||||||||| | ||| |||| ||||||| | ||| | || || || ||||| || Sbjct 2059 GGATGGCCCGTCGCATTT-TTACTACCCGAATCACTCGCAAGGAATGGCTTCTATTACCT 2001 Query 46885 TGGAAGAGGTGATGAAGTTCGATGCGCCTTTTGCAAGGTTGAGATCATGCGTTGGGAAGA 46944 || | || |||||||| || ||||| ||||| || || || | ||| |||| | Sbjct 2000 AGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAACTTATGAAATGGGTTGC 1941 Query 46945 GGGTGATGATCCTGCCGAAGACCATAAACGTTGGGCTCCTCAGTGTCCGTT 46995 ||| || ||||| ||| | ||||| | || ||||| || ||||| || || Sbjct 1940 GGGCGACGATCCCGCCCAGGACCACCAGCGGTGGGCGCCCCAGTGCCCCTT 1890 >seq10767 Length=4660 Score = 84.2 bits (92), Expect = 1e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || || | ||| ||||| || ||| |||||||||||||| || || || Sbjct 4284 CCACCTCTGAGTCGGAGCACTAAATGTAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAG 4225 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAA 34580 || ||||| | ||||| | ||||||||||||||| ||||| Sbjct 4224 AGGGTTCGGCCATCTTCCAATTGTTTACCGGCAAAGATTAA 4184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313365060411653