Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq54613 89.7 4e-13 >seq54613 Length=3623 Score = 89.7 bits (98), Expect = 4e-13 Identities = 166/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 39045 AAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTAT 39104 |||| | | || |||||||| | || | |||| ||| || ||| |||||||| || Sbjct 3585 AAATATTTGCATGCCTCCTCGCAGACGCAGTACCAGATGAAGGGTGGATTCTTTTTGAAT 3526 Query 39105 ATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTG 39164 |||||| || | ||||| || | || || | || || || ||||| ||||||||||| Sbjct 3525 ATTATAGTCAGATAGTGTGCGACCATCTTCTAATTGCTTACCAGCAAAGATAAGACGCTG 3466 Query 39165 CTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTAT 39223 ||| || |||||| | | ||||||||| |||||| ||| | | | | |||| Sbjct 3465 CTGATCAGGTGGG-ATACCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTAT 3407 Query 39224 CGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCA 39283 | | || || || | ||||| |||| || || || || || |||||||| |||| Sbjct 3406 CAGAGGCTTCAACTTCTAAAGTGATTGTTTTCCCTGTAAGTGTCTTTACAAAGATCTGCA 3347 Query 39284 T 39284 | Sbjct 3346 T 3346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427683264915533