Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq121238 181 9e-41 >seq121238 Length=2101 Score = 181 bits (200), Expect = 9e-41 Identities = 627/966 (65%), Gaps = 23/966 (2%) Strand=Plus/Minus Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200 || || || || ||||||||||| || | || || || ||||| | || | Sbjct 1357 GCTTATTTCGTAGAATGGGGTGTTTATCCTAGGAAATTCCCTGTGGATCGTATACCTATA 1298 Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260 || ||| | | ||| | || ||||| || |||||||| || ||||| ||||| ||||| Sbjct 1297 CCTAATCTTACTCATCTACTCTACGGCTTCATTCCAATTTGCGGCGGTGACGGTATCAAT 1238 Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320 ||| | | ||| || |||||||| | || || || ||||| || |||| ||| Sbjct 1237 GACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCATTACAGCGATCTTGTAGCGGCCGC 1178 Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380 || ||||||||||| || || || || ||||| || | |||||||| |||| ||| Sbjct 1177 GAGGATTTCAAAGTCTCAATCCATGATCCATGGGCAGCATTACAAAAACCACAAAGAGGA 1118 Query 109381 GTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATTG 109440 || | | ||||| || || ||||||||||| ||||| ||||||||| | |||| Sbjct 1117 TTGTCTTCATGGAATGAACCCTACAAAGGCAATTTTGGCCAATTGATGTCTCTCAAACAA 1058 Query 109441 GCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACGTTGTCGGACCCGTT- 109499 || || | | || ||||| || || || || ||||||||| | | || || || Sbjct 1057 GCCCGACCCGATTTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCTGATCCATTC 998 Query 109500 TTATTTT--ATGCACGATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATTT 109557 || |||| | || | | | || ||| | ||| || | || || || ||| Sbjct 997 TTCTTTTTCGTTGACAAAT---CTAAGAGAACACGATTTGTGCAGTCAGTCAAGGAGTTT 941 Query 109558 TTACAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAAG 109617 | | ||||||||||| || || || || || ||||||||||| || || ||||| Sbjct 940 CTTTTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAAA 881 Query 109618 GGTGCCAATCC-GAGTCTCGGCGACGCAACGCGCGACAGCAAAACGTACATTGCGTTGTT 109676 || || || || || | || | | | | | | | ||| | ||| | Sbjct 880 GGCGCTAACCCTGACCTTGGGAGTCCAGAAGATGGTGATTGTTATGTAAGT----TTGAT 825 Query 109677 AAAAGAGTTGCGCGCCATGTTGGACG-ACTTGCAAACGGCCACCAA---CAAAACGTACG 109732 ||||| || || | ||| | || | ||| || || | || || | |||| Sbjct 824 GAAAGAATTACGTGAGATGCTCGATGAACTCTCA----GCTAAGAATGGTAAGAAATACG 769 Query 109733 AATTGACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTACGCGTCGG 109792 |||| || || |||||||| || | |||||||| | || || || ||| || Sbjct 768 AATTAACTTCTGCTATTAGCGCTGGGTGGGATAAAATCCAAGTTGTTGACTACAGCAAGG 709 Query 109793 CGCAACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGTCAA 109852 | ||| | ||| |||| | || || || |||| ||||| |||||||| || ||||||| Sbjct 708 CTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAAGGTGCCTGGTCAA 649 Query 109853 ACACGGACT-TAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACGAATTG 109911 | ||| | || |||| || | |||||||||| | ||||| || || ||| Sbjct 648 A-TGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAACCCCAAGGAAACT 590 Query 109912 TACACGACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaaaaaTT 109971 ||||| | || | | || ||| | |||| ||| |||| ||||| || ||| Sbjct 589 TACACTTCTGACTTCGGAGTAAAATACTTGTTAGCACAGGGAGTGAATCCTAAGAAGATT 530 Query 109972 ATAATTGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCG-TCGTGCACGCCGACGACGC 110030 || | || || || ||||| || || || ||||| || | || || | ||| ||| Sbjct 529 GTAGTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGAGTTCATG-ATTACGAAGACAA 471 Query 110031 GAATCCGTTTTTGGGCATCGCCTCCGGTCCCGTGGAAGGCACTTGGGAAAACGGCGTGGT 110090 ||||| || |||| ||| | || || || | || |||||| || |||| ||||| Sbjct 470 CAATCCCTTCACAGGCAACGCTACTGGACCTGTCAAGGGTACTTGGCAAGACGGAGTGGT 411 Query 110091 GGACTA 110096 ||||| Sbjct 410 CGACTA 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407884677323919