Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq7548 558 5e-154 >seq7548 Length=2633 Score = 558 bits (618), Expect = 5e-154 Identities = 1103/1613 (68%), Gaps = 27/1613 (2%) Strand=Plus/Minus Query 75359 ATTTTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAG 75418 |||||| || || | |||||||| || | | | ||| |||||||| |||| ||| Sbjct 2257 ATTTTACCTTTGTCTACGGTGAACTGTATAGCATTTGCTGCCGGTTTTGTGCGTAAGTAG 2198 Query 75419 TACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAA 75478 ||||| || ||||||| |||| |||| ||| |||||| || |||||||| | Sbjct 2197 TACATTCCTGTTTTTAAGCCCATTTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 2138 Query 75479 TAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTA 75538 || | || | || | ||| || || | || |||||||| || ||||||||||||||| Sbjct 2137 TAGTTAGGCTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATGAAAGCTCCTCTA 2078 Query 75539 TCAGCCGCCATTTTTATAATGGTC-TTTTGA--GGAATTTCCCAAATAGTTTTGAAAACT 75595 ||||||||||||| ||| || | |||| | | ||| ||||| | |||||| | | Sbjct 2077 TCAGCCGCCATTTGTAT---GGACGTTTTCAATGAAATCTCCCATACGGTTTTGTACAAA 2021 Query 75596 TGTTTGATATCATCTGGAAGATTTGTATTTT---GAATGGATCCGCCATCAGATATAATT 75652 | | | || || | |||| ||| | ||| | || |||||| | ||| ||| Sbjct 2020 TCTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCGTTGTTGTATAAAATA 1961 Query 75653 GTATTCTTGATCTCATCATTCCACAATTTT-CTCTCGGTTAAAACTCTAAGGAGATGAGG 75711 ||| || || || |||| ||| || | |||| ||| ||| || | || || ||| | Sbjct 1960 AGATTTTTCATATCTTCATCCCATAAATCGGCTCT-GGTCAAATCTGTCAGAAGGTGATG 1902 Query 75712 ATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGG 75771 ||| || | ||||||||||||| || ||||||| |||||| || ||| | || Sbjct 1901 ATTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATGTTTGATGTAAAGGG 1842 Query 75772 TTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCAC 75831 ||| | ||| ||| |||| || | |||||| || || || || || |||||||| || | Sbjct 1841 TTCAAAAGACTCAGTGTTACCAAGAATTTGTGCTGTAGAGGCGGTTGGCATAGGAGCTAA 1782 Query 75832 CAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 75891 ||||| | ||| | | ||||||| || ||||| ||||| || ||| ||||| Sbjct 1781 CAATAGAGAATTGCGCAAACCATGTTTTGCTATTTTTTCTTTGAGGGCAGCCCAGTCCCA 1722 Query 75892 AAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGA 75951 || || | || ||||| | ||| |||||||| || || | ||| || || Sbjct 1721 CAGTTCCGTAGGAGTTTTGTCCCACATATCATATTGTAGGATACCTTGGCT--CACTGGA 1664 Query 75952 -TCCATT-ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009 ||| || ||| || ||| | || || ||||| |||| ||| ||||| || ||||| Sbjct 1663 CTCCCTTCATAAGTACTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAAT 1604 Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCA 76069 ||||| |||||||| ||||| || || | | |||||| | |||| ||| || Sbjct 1603 GCACCATAATAAATAGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCG 1544 Query 76070 AAAGGATAATGTAAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGG 76128 |||| || | | | | | ||||| |||||| | ||||||||| |||||||| ||||| Sbjct 1543 TAAGG-TATTCTCATCAACACAAATGTATCTGCCATTCCCTGAACACCAATACCGATAGG 1485 Query 76129 TCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAAT 76188 | || || |||| ||| ||| ||||| || | ||| ||| | |||| ||| || | Sbjct 1484 CCGGTGCTTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGAC 1425 Query 76189 TTTATTGAGATTTCTGACA-ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATT 76247 ||| || | |||| ||| || | ||| | || |||| ||| ||||| ||||| Sbjct 1424 TTTGTTTAAATTT-TGAGTGACAATTTTTGTGATTTCTTTTAATTTTTTAAAATTAAATT 1366 Query 76248 TTCCATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCAT 76307 || | |||||||| ||||| ||||| || || ||||| || || || || |||| Sbjct 1365 GCTTATGTTCAACAAACATGTTAAGTGCTATGGAAGCAAGATTGCATACTGCCACTTCAT 1306 Query 76308 TAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGAT 76367 | | ||||| | | ||| ||||| ||||| ||||| || ||||| ||||||| Sbjct 1305 CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGAT 1246 Query 76368 TTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTT 76427 | | ||| || ||||| ||||||| | |||||||| | | | || || ||||| | Sbjct 1245 TCTTTTGATTACTCTTCCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCT 1186 Query 76428 CAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTTGTA 76485 | | || | ||| ||||| || ||||| | ||||| |||| | | | | ||| || Sbjct 1185 CCACTTGGGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCTGACTT--GTTTTATA 1130 Query 76486 --TCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCA 76543 ||| || ||| ||||||||| | ||||| |||||| || ||||| | ||| Sbjct 1129 AATCGTTTTTCTTTTTCATATTTGGCATATAGTTCTTCAAACTCCTCTCCATAGCAGTCA 1070 Query 76544 TCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGT 76603 | | ||||||||| |||| |||||||| | ||| | |||| | | || | | Sbjct 1069 GCGAGACCAGGACAGTCATGAGGACACATTAGACTCCAAACTTCATCCTTTTCTACTCTT 1010 Query 76604 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCA 76663 |||||||| ||||| |||||||||| |||| ||| || |||| | ||| |||||| Sbjct 1009 TTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCC 950 Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723 || ||||| ||||| | | ||||| |||||| | || || | |||||| || |||| Sbjct 949 TTACCTGTGTTCTTCCTTAAATCTAAGAACTCAAATATGTCTGCATGCCAAGGCTCTAAG 890 Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783 || || || | |||| || ||||| || || || ||||||| |||||||||||| || Sbjct 889 TAAATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTG 830 Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 ||||| |||||||||||||| | | || || || ||||| || |||| |||||| Sbjct 829 TTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATATAA 770 Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 || || | || | || || ||||| || || || |||||| ||| Sbjct 769 GAACCCTGGGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATT 710 Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT 76956 | |||||| |||| || || ||| | ||||| || || ||||| || |||| Sbjct 709 AAAGCACATTGTTTTAAAGTATCAAAAATGCCTTCAATGCTATCGTCTTTCAT 657 Score = 105 bits (116), Expect = 9e-18 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 77137 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196 |||||| ||||| || ||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct 210 CTTATTGTTTATCTTTAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 151 Query 77197 TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTT 77247 | ||| ||||| || |||| ||| | || | | ||||||||| | ||| Sbjct 150 TTTAAAATCTCTGTCATAAACAATGGCAGAGTCCAATTTGTCCTTGTTTTT 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709764150045120