Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq355714 84.2 3e-11 >seq355714 Length=343 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/113 (77%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 3208 TATTGTCTCGTAGCTCAGTTGGTCAGAGCGCTCGCCTGATAAGCGGGAGGTCAGTGGTTC 3267 ||| | || |||||||||||||| ||||| | ||| ||||||||| | |||| | ||||| Sbjct 239 TATGGGCTAGTAGCTCAGTTGGTTAGAGCACACGCTTGATAAGCGTGGGGTCGGAGGTTC 180 Query 3268 AAGTCCACTCGAGACAACCAA--TTCGGTTCTGTAGCTCAGTCGGTAGAGCAC 3318 |||||| | | | | ||||| || || |||||||||| || ||||||| Sbjct 179 AAGTCCTCCCTGGCCCACCAAGGTTTGGGGGTGTAGCTCAGCTGGGAGAGCAC 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779876584128000