Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq54613 107 4e-18 seq37844 104 5e-17 seq2515 98.7 2e-15 >seq54613 Length=3623 Score = 107 bits (118), Expect = 4e-18 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| |||||||| |||||||||||||| || | | || | |||||| Sbjct 2654 AGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGTGTACGGCCATCT 2595 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 |||| ||||| || || || || | | || || || | | || |||||||| | Sbjct 2594 TCTAATTGCTTT--CCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGT 2537 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||||||||| ||| ||| | || | | || ||| || ||||| | |||||| | Sbjct 2536 CTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCTTCAACTTCCAAAGTAATGG 2477 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||| ||||| || || || || || | ||||||||| Sbjct 2476 TTTTACCCGTAAGTGTTTTGACAAAAATCTGCATTTT 2440 Score = 95.1 bits (104), Expect = 3e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 ||||| || ||||| |||||||||||||| || | ||| || | |||||||| || Sbjct 3320 TGAAGGGTGGACTCCTTTTGGATGTTGTAGTCCGATAAGGTACGGCCATCTTCCAGTTGC 3261 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || ||||||||||| | ||| || || | | || || ||||| ||||| || || Sbjct 3260 TTGCCTGCGAAGATAAGACGCTGTTGATCTGGAGGAATACCCTCCTTGTCTTGGATCTTA 3201 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || ||| | || | | |||| || |||||| || ||||||||||| Sbjct 3200 GCCTTAACATTTTCAATGGTGTCAGATGCCTCTACCTCCAGAGTAATAGT 3151 >seq37844 Length=1442 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| |||||||||||||||||||||||||| || | | || | |||||| Sbjct 497 AGCACTAAATGCAGAGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 438 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| || || ||||||||||| | ||| || || | | || || ||||| ||| Sbjct 437 TCTAGTTGCTTGCCTGCGAAGATAAGACGCTGTTGATCTGGGGGAATACCCTCCTTGTCT 378 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | |||| | ||| || || | |||||| ||| Sbjct 377 TGGATCTTAGCCTTAACATTTTCAATAGTGTCGGCTGGCTCCACCTCTAAAGTAATGGTT 318 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| || || | |||||| Sbjct 317 TTCCCAGTAAGTGTCTTAACAAAAATCTGCAT 286 Score = 87.8 bits (96), Expect = 4e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | |||||||||||| || || ||||| ||||| | ||| | ||||| || | Sbjct 264 CAAG-TGCAAAGTAGACTCTTTCTGAATATTGTAGTCGGCGAGAGTACGACCATCCTCCA 206 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || ||||| || || | || ||||| | | || || || || ||||| | Sbjct 205 GCTGCTTACCAGCGAAAATTAGACGTTGTTGGTCTGGAGGAATACCCTCTTTGTCTTGGA 146 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| | || | |||| ||| || ||||| | || || ||||| | Sbjct 145 TCTTGGCTTTAACATTTTCAATAGTGTCCGAAGGTTCAACTTCTAATGTGATTGTTTTCC 86 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 85 CTGTGAGTGTCTTTACAAAGATCTGCAT 58 >seq2515 Length=4501 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| || |||||||| | || || || ||||| ||||| ||||| | || || | Sbjct 3684 AGTCGCAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTATAATCAGACAATGTACGT 3625 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||||||||| || || || ||||| | | |||||||| | | || |||||| Sbjct 3624 CCATCTTCTAGCTGCTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTGGAATACCTTCC 3565 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || || ||| ||| | || | | || || || || ||||| ||| Sbjct 3564 TTATCTTGGATCTTAGCTTTTACATTTTCAATAGTATCAGAGGCTTCCACCTCAAGGGTA 3505 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| ||||| || ||||| ||||| | |||||| Sbjct 3504 ATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 3466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1148561763758211