Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25]
355,741 sequences; 337,370,441 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq52122 93.3 4e-14
seq49004 91.5 2e-13
>seq52122
Length=5755
Score = 93.3 bits (102), Expect = 4e-14
Identities = 126/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 23812 GAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGA 23871
||||| | |||||| || ||||| ||||| |||||||| || || ||||| | || ||||
Sbjct 5755 GAATGGACATTTTCCATGGCAATTTGAAAACCATAAAAGCACCTGGCTTCGGTCACTTGA 5696
Query 23872 ACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAG 23931
|| || | | || | | | || || || ||||||||||||||| ||| || |||
Sbjct 5695 ACCTCTTGTGAGAACCGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCTGCGAAG 5636
Query 23932 AAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATC 23987
|| || | |||| || ||||||||| | ||| | | |||| | | ||||||
Sbjct 5635 AATGCTAAGACATGCTTGATAAAATGTTTCTCACAATCTTTTAATGTCTCCCAATC 5580
>seq49004
Length=3997
Score = 91.5 bits (100), Expect = 2e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592
||||||||| ||| | |||||| || || ||||| ||||| | |||||||||||
Sbjct 309 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTC 250
Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652
| ||||||||||| |||||| || || || || || |||||||| |||||||| ||
Sbjct 249 AACCAAAATATTGAAGCAAAGCTGCCCGAGAAAAATATTCCCTCAACCGCCGCAAAAGCG 190
Query 23653 ACAAGACGTGTACCAAATGTTGC 23675
| | |||| ||||||| ||
Sbjct 189 ATTATACGTTCTGCAAATGTGGC 167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 519169066717400
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |