Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq37844 120 3e-22 seq54613 89.7 5e-13 seq55701 84.2 2e-11 >seq37844 Length=1442 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| | |||||| || ||| || || ||||| ||||| || Sbjct 512 CCACCACGAAGACGAAGCACTAAATGCAGAGTAGACTCTTTTTGGATGTTGTAGTCAGAC 453 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || || |||||||| ||||| || || |||||||| || | |||| Sbjct 452 AGGGTGCGGCCATCTTCTAGTTGCTTGCCTGCGAAGATAAGACGCTGTTGATCTGGGGGA 393 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| || ||| ||| || ||||||| | |||||| Sbjct 392 ATACCCTCCTTGTCTTGGATCTTAGCCTT-AACATTTTCAATAGTGTCGGCTGGCTCCAC 334 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || ||||| || || || ||||| || ||||||||||| Sbjct 333 CTCTAAAGTAATGGTTTTCCCAGTAAGTGTCTTAACAAAAATCTGCAT 286 >seq54613 Length=3623 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || || |||||| || ||||| ||||| || Sbjct 2669 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAA 2610 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || | ||||| || || || |||| || ||||| || | ||| Sbjct 2609 AGTGTACGGCCATCTTCTAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2550 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCAC 41814 | || |||||||| ||| |||| |||| || || ||| ||| | || || Sbjct 2549 ATGCCTTCCTTGTCT-TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCTTCAAC 2491 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| || || ||||||||||| || || || || ||||||||||| || Sbjct 2490 TTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTGACAAAAATCTGCATTTT 2440 >seq55701 Length=1651 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 ||||||||||| |||||||| || | || ||| | || || || ||||| |||||||| Sbjct 334 TCCTTCTGAATATTATAGTCTGACAATGTACGCCCATCTTCTAGTTGCTTTCCGGCGAAA 393 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-A 41790 || || | ||||| || | |||| || ||| |||||| ||| | ||||| | ||| Sbjct 394 ATTAGTCTTTGTTGATCTGGAGGAATGCCCTCTTTGTCC-TGAATCTTTGCCTTTACGTT 452 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | || || | ||||| |||| || || ||||| || || | || ||||| Sbjct 453 CTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCGGTTAAGGTTTTTAC 512 Query 41851 GAAAATCTGCATG 41863 ||| || |||||| Sbjct 513 GAAGATTTGCATG 525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460248243909200