Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq4450 167 2e-36 >seq4450 Length=177458 Score = 167 bits (184), Expect = 2e-36 Identities = 566/876 (65%), Gaps = 8/876 (1%) Strand=Plus/Plus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| || | ||| |||||||| || || ||||| || |||| ||||| || ||| Sbjct 24025 TGGTATTCTCCAACTTTCTTTTCGAAGAAATTGGTTTTTCCGTCTATCGATATGTTATCC 24084 Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAA---ATATTTTAGAGTACCCCAGTTCGGCGATT 16792 || |||| || ||||| | || || | |||| || | |||| || || | Sbjct 24085 ATAAAATTGAAGGGATT--TCGC-GAGTGGTAGATTTCAGCGATTCCCAAATCTGCCAGC 24141 Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852 | | || || || ||||| || |||| ||||| | | |||| ||||| || || | | Sbjct 24142 AGCTTGTCAGCCACGAATTCGATGTATTCACACATAAGTCCGCAATTCATGCCGATCAAA 24201 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 ||| || || ||||| || | ||| || || || || || || | || || Sbjct 24202 GATACAGGCAGGGCTTCGGTAAGAAACTCCTGTTCGATCTTCACGGCATCTCTGATGATG 24261 Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 | || | ||||| || || | || | || |||||||||| ||| ||||| Sbjct 24262 TTCTTGACCCTCTCCTCTGAAGGCTTCTGCACGACGTGCTTAAACATCAAACACGCGAAT 24321 Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032 | ||| || | | || || ||| ||| | ||||| || || || | ||||||||| Sbjct 24322 TTGCAGTGCATCGCTTCATCCCTGGAGATCAACTCGTTGGAGAAAGTGAGACCGGGCATC 24381 Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092 |||| ||||| | ||| || |||| |||||| || || ||||| |||||||| Sbjct 24382 AATCCTTTCTTCTTCAGCCAGAAGATCGAGGCGAAACTGCCGGAGAAGAAAATACCCTCC 24441 Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152 || | |||||| |||| | | ||| || | ||||| |||| | |||||| || Sbjct 24442 ACTGCTGCAAAAGCGACGACCCTTTCACCGAATGTCGCTTCTTGACTGGAAATCCAATTT 24501 Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA-ATTT 17211 | |||| || || || | || | ||| || ||||| || || |||| | | Sbjct 24502 AACGCCCAATCAGCCTTCTTTTTCACGCATGGAATAGTTTCAATTGCATTAAGAAGAAAA 24561 Query 17212 CTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTG 17271 || ||| |||| | || | ||||| || || || | | |||||||| ||||| Sbjct 24562 CT-TTTCTCCTTCACATCTTTGATATAAGTGTCTATCAACAAACTGTACATCAGTGAGTG 24620 Query 17272 TATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331 ||||||||||||||| ||||| | || || ||| || || || | ||| ||||| Sbjct 24621 TATGTTCTCCATGGCAATCTGCATGCCATAGAAGAATTTTGCCTCAATAACTTGTACTTC 24680 Query 17332 CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 ||||| || | || ||||| || || || || || || || ||||| || Sbjct 24681 TTTACTGAATCTCTCTACCAGGTTTTCATTGACAATACCATCAGAGGCAGCAAAAAATGC 24740 Query 17392 CAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATC 17451 ||| | || ||| ||||||| ||| || | | || | ||| || || | || Sbjct 24741 CAACACATACTTGATGAAATGTTTCTCATTTGAAGTCATTTTTTCCCAATCTTTGTAGTC 24800 Query 17452 TTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATT 17511 || || | ||| ||||| | ||||||| ||| | || | || |||||| || Sbjct 24801 CTTCGACAAATCAACTTCATGAACCTTCCAAAATGAGGCCTCAGCTTGTTCATACATCTT 24860 Query 17512 CCAAATATCATTGTATTGTATGGGGAATACAACATA 17547 ||| || ||||| || || ||||| || ||||| Sbjct 24861 CCACATGTCATTATAGACGATTGGGAACACTACATA 24896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517515517662000