Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq4450 264 1e-65 >seq4450 Length=177458 Score = 264 bits (292), Expect = 1e-65 Identities = 576/855 (67%), Gaps = 8/855 (1%) Strand=Plus/Plus Query 15914 TGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCC 15973 ||||| || | ||| ||||||||||| || |||||||| |||| ||||| || ||| Sbjct 24025 TGGTATTCTCCAACTTTCTTTTCGAAGAAATTGGTTTTTCCGTCTATCGATATGTTATCC 24084 Query 15974 ATAAAATCAAAGGGATTAGT--AGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031 ||||||| |||||||| || | | || || || | |||| || | | | Sbjct 24085 ATAAAATTGAAGGGATTTCGCGAGTGGTAGATTTCAGCGATT--CCCAAATCTGCCAGCA 24142 Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACATTAAGTC-GCAATTAATTCCTATAAGT 16090 | || || || ||||| || |||| |||||| ||||| |||||| || || || | Sbjct 24143 GCTTGTCAGCCACGAATTCGATGTATTCACACAT-AAGTCCGCAATTCATGCCGATCAAA 24201 Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 ||| || || |||| || | ||| | ||||| ||| || || ||| | ||||| Sbjct 24202 GATACAGGCAGGGCTTCGGTAAGAAACTCCTGTTCGATCTTCACGGCATCTCTGATGATG 24261 Query 16151 TCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAG 16210 | || | | || || || | || | ||| |||||||| | ||||||||| Sbjct 24262 TTCTTGACCCTCTCCTCTGAAGGCTTCTGCACGACGTGCTTAAACATCAAACACGCGAAT 24321 Query 16211 TCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATT 16270 | ||| || | |||| || ||| ||| | |||||||| ||||| | || ||||| Sbjct 24322 TTGCAGTGCATCGCTTCATCCCTGGAGATCAACTCGTTGGAGAAAGTGAGACCGGGCATC 24381 Query 16271 TTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCA 16330 |||| ||||| | |||||| |||| || || || || ||||| |||||||| Sbjct 24382 AATCCTTTCTTCTTCAGCCAGAAGATCGAGGCGAAACTGCCGGAGAAGAAAATACCCTCC 24441 Query 16331 ACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTC 16390 || | ||||||||||| | | ||| || | || || |||| | | |||||| || Sbjct 24442 ACTGCTGCAAAAGCGACGACCCTTTCACCGAATGTCGCTTCTTGACTGGAAATCCAATTT 24501 Query 16391 TGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA-ATTT 16449 |||| || || || | ||| | || || ||||| || || |||| | | Sbjct 24502 AACGCCCAATCAGCCTTCTTTTTCACGCATGGAATAGTTTCAATTGCATTAAGAAGAAAA 24561 Query 16450 CTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTG 16509 || ||| |||| | ||| | ||||| || || |||| ||||||||||| |||||| Sbjct 24562 CT-TTTCTCCTTCACATCTTTGATATAAGTGTCTATCAACAAACTGTACATCAGTGAGTG 24620 Query 16510 TATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC 16569 ||||||||| ||||| ||||| | ||||||||| || ||||| | ||||||||| Sbjct 24621 TATGTTCTCCATGGCAATCTGCATGCCATAGAAGAATTTTGCCTCAATAACTTGTACTTC 24680 Query 16570 CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGC 16629 |||| || ||||||| ||||| || ||||| ||| ||||||||||| || Sbjct 24681 TTTACTGAATCTCTCTACCAGGTTTTCATTGACAATACCATCAGAGGCAGCAAAAAATGC 24740 Query 16630 CAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATC 16689 ||| | | ||| ||||||| ||| || | || || | | | ||||||||| | || Sbjct 24741 CAACACATACTTGATGAAATGTTTCTCATTTGAAGTCATTTTTTCCCAATCTTTGTAGTC 24800 Query 16690 TTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTT 16749 || || | ||| ||||| | | ||||||| ||| | || | || |||||| || Sbjct 24801 CTTCGACAAATCAACTTCATGAACCTTCCAAAATGAGGCCTCAGCTTGTTCATACATCTT 24860 Query 16750 CCAAATATCATTGTA 16764 ||| || ||||| || Sbjct 24861 CCACATGTCATTATA 24875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511384674038000