Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1383 96.9 3e-15 >seq1383 Length=53393 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 18946 CTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTC-AG 19004 |||||||||||| || || || |||| |||| || ||||| || ||| | Sbjct 31962 CTTGGAATCCAATCGACATTCCGCAGATGGCTTTACCGCCTTGTCATT-GTCTCGTCCAA 32020 Query 19005 TTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGC 19064 ||||||||||| ||||| || || ||||| | ||||||||||| | ||||||||| Sbjct 32021 TTTTACGTTGCTAACGGAGAGTTGAGCTGCCTGCTTTACCAGAGATCCGCGGATATGGGA 32080 Query 19065 CTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTT 19124 || || || ||||||||||| || | || || | ||||||||||| | || || | Sbjct 32081 CTCGGAGTTCCGTTCAACATCGCCAGTTACGCTTTACTTACCTACATGATGGCACACATC 32140 Query 19125 ACAGGACTTAAA 19136 || || |||||| Sbjct 32141 ACCGGGCTTAAA 32152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399481359359250