Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1383 109 4e-19 >seq1383 Length=53393 Score = 109 bits (120), Expect = 4e-19 Identities = 343/519 (66%), Gaps = 12/519 (2%) Strand=Plus/Minus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 |||| || || |||||| | || | | || || || || ||||| || || ||||| Sbjct 32142 GTGATGTGTGCCATCATGTAGGTAAGTAAAGCGTAACTGGCGATGTTGAACGGAACTCCG 32083 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAA 101872 | |||||||| || ||||| || || || | ||| | || ||| | | || ||| Sbjct 32082 AGTCCCATATCCGCGGATCTCTGGTAAAGCAGGCAGCTCAACTCTCCGTTAGCAACGTAA 32023 Query 101873 AATTG-ACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCA 101931 ||||| || | | |||||||||||| || |||| | |||||||| |||||| Sbjct 32022 AATTGGACGAGACA-ATGACAAGGCGGTAAAGCCATCTGCGGAATGTCGATTGGATTCCA 31964 Query 101932 AGCACACATTAACATCCTTCTATCTGTAGGGTTTGTT-TTTATAGTATCAATCAACTGTT 101990 ||| ||||||| ||||| ||||| || ||| | || || || || | |||| | | Sbjct 31963 AGCGCACATTATGATCCTCCTATC-GTTTGGTCTATTCTTGATCGTCTGGATCACGTTGT 31905 Query 101991 TTAATTGGTCAACTCCTTCTCCTT--TATAATC-GCGCCCAACACCTTTATATTCTGCTC 102047 | ||| |||| || || || | ||||| ||| || | |||| || | || | Sbjct 31904 GCAGTTGATCAATACC--CTTGTTGGTGTAATCGGCGTGCATC-CCTTCGTACTTGGCAC 31848 Query 102048 CGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAA 102107 || |||||||||| || |||||||| | || || | || ||||| || || || | Sbjct 31847 CGTAATGCCTCCATTGGAATCCATAAATTGGACCCAAGTCACCTTCCTCCCTCGAATTCA 31788 Query 102108 AACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCA-CGCCAGCT 102166 | || | ||| || || || | | || |||||||||||||| | | | | Sbjct 31787 ACCCGACCGAATCCAAGAAATCCCTGGTGCTGTTTGCATCCCAAATGTGAATCTTCCTGT 31728 Query 102167 GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACA 102226 ||| | ||| || || || ||| ||||| ||||||| ||| || || || || Sbjct 31727 CCTGCAATTCCTTAGC-GTTCGTGCTTCCCCTGATGAACCACAGCAGCTCCTCCACGACG 31669 Query 102227 CCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAAT 102265 || |||| || |||| ||| || || | | ||||||| Sbjct 31668 CCCTTCCAGAAGACTCGCTTCGTCGTCAGCAATGGAAAT 31630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361230727217150