Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq429 96.9 3e-15 seq830 84.2 2e-11 >seq429 Length=41586 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 ||| |||| ||||||||||| ||||| || ||||| ||||||| ||| || | | || Sbjct 1124 GAGGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTACGTCCATC 1183 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 ||| || || || || || | ||||| | ||||| || ||| | || |||||||| Sbjct 1184 CTCGAGTTGCTTACCGGCGAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCCTTGTC 1243 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 |||||| ||||| | ||| ||||| ||||| || | ||| ||||| Sbjct 1244 TTGGATCTTGGCCTTCACATTCTCGATGGTATCGGAAGGCTCGACCTCAAGGGTGATGGT 1303 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 ||| || || || ||||| || || || |||||||| Sbjct 1304 CTTACCCGTCAAAGTTTTTACGAAAATCTGCATTTT 1339 >seq830 Length=194395 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| ||| | |||||| ||||| || ||||| ||||| | ||| || | | || ||| Sbjct 123315 ACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGAGTCCTGCCATCTTCC 123374 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 | |||||| || ||| |||| | | ||||| || ||| | ||||||||||| Sbjct 123375 AACTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGGGGGATCCCTTCCTTGTCTTGA 123434 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 ||||| || || | | | ||| ||| ||||| |||| || ||||| || Sbjct 123435 ATCTTAGCCTTGACATTTTCAATAGTGTCAGAAGGCTCAACCTCCAAAGTGATGGTTTTA 123494 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| ||||| ||||| || ||||| Sbjct 123495 CCAGTTAAGGTTTTCACAAAAATCTGCAT 123523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422235269779400