Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq830 104 2e-17 >seq830 Length=194395 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| | ||||||||||| || ||||||||||| ||| ||||| | Sbjct 124225 ATGCAGATCTTCGTTAAAACATTGACTGGAAAAACCATTACTTTGGAAGTTGAACCATCT 124166 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | ||||| ||||| || || ||||| | || |||||| Sbjct 124165 GACACAATTGAAAACGTCAAGGCCAAAATCCAAGACAAGGAAGGAATCCCTCCAGATCAG 124106 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | ||||| || || ||||||||||||||| || ||| || | || ||||| Sbjct 124105 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCAGACTACAAC 124046 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || |||||||||||||| ||||| |||| || || Sbjct 124045 ATCCAAAAGGAATCTACCCTTCATTTGGTATTGCG 124011 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || | ||||| ||||| || |||||||||||| ||| ||||| | Sbjct 124681 ATGCAGATCTTTGTTAAAACCTTGACTGGAAAAACCATTACCTTGGAAGTTGAACCATCT 124622 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || |||| ||||| || || ||||| | || ||||||| Sbjct 124621 GACACAATTGAAAATGTCAAAGCCAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAA 124562 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | ||||| || || || |||||||||||| || ||| || | || ||||| Sbjct 124561 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGGACTCTGTCGGACTACAAC 124502 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 |||||||||||||| || ||||| |||| || || Sbjct 124501 ATTCAAAAGGAATCCACCCTTCATTTGGTATTGCG 124467 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| | ||||| ||||| || ||||| || || ||| ||||| | Sbjct 123751 ATGCAGATCTTCGTTAAAACCTTGACTGGAAAAACTATCACTTTGGAAGTTGAACCATCC 123692 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | ||||| ||||| || || ||||| | ||| |||||| Sbjct 123691 GATACAATTGAAAACGTCAAGGCTAAAATCCAAGACAAGGAAGGAATCCCCCCAGATCAG 123632 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | ||||| || || ||||||||||||||| || ||| || | ||||||||| Sbjct 123631 CAACGTTTAATCTTCGCCGGTAAACAATTGGAAGATGGCAGGACTCTGTCTGATTACAAT 123572 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || |||||||| ||||| || |||| || || | || ||||| Sbjct 123571 ATCCAGAAGGAATCCACTCTCCATTTGGTATTGCGTCTTCGTGGAGG 123525 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| | ||||| ||||| || ||||| |||||| ||| ||||| | Sbjct 124453 ATGCAGATCTTCGTTAAAACCTTGACTGGAAAAACTATTACCTTGGAAGTTGAACCATCT 124394 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | ||| ||||| || || ||||| | || |||||| Sbjct 124393 GACACAATTGAAAACGTAAAGGCCAAAATCCAAGACAAGGAAGGAATTCCTCCAGATCAG 124334 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | |||||||| || ||||||||||||||| || ||| || |||| ||||| Sbjct 124333 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCCGACTACAAC 124274 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || |||||||||||||| || | || || || | || ||||| Sbjct 124273 ATCCAGAAGGAATCTACTCTCCATTTAGTATTGCGTCTTCGTGGAGG 124227 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| | ||||| |||||||| || || || || || |||||| | Sbjct 122839 ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACTATCACTTTGGAGGTGGAACCGTCT 122780 Query 25095 GAGACGGTGGCCGATC--TCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATC 25152 || || | | || | | |||| |||| | ||||| ||||| | || ||||| Sbjct 122779 GATACAATCGA-GAACGTTAAAGCCAAAA-TCCAGGATAAGGAAGGAATTCCACCAGATC 122722 Query 25153 AACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACA 25212 | || | | || ||||| ||||| |||||||||||| || |||| || | || |||| Sbjct 122721 AGCAGCGTTTGATTTTTGCTGGCAAGCAATTGGAAGATGGCAGAACTCTGTCTGACTACA 122662 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 | || || |||||||| || |||||| |||| ||||| || || ||||| Sbjct 122661 ACATCCAGAAGGAATCAACCCTTCACTTGGTTTTACGTTTGCGTGGAGG 122613 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | ||||| ||||| || |||||||| ||| ||| ||||| | Sbjct 123295 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATCACCTTAGAAGTTGAACCATCC 123236 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | ||| |||||| || || |||||| | || |||||| Sbjct 123235 GATACAATTGAGAACGTTAAGGCCAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAG 123176 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | ||||| || || ||||| ||||| ||| || || || | ||||||||| Sbjct 123175 CAACGTTTGATCTTCGCAGGTAAACAGTTGGAGGATGGCAGGACCTTGTCTGATTACAAT 123116 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || |||||||||||||| | || |||| || || | ||||| || Sbjct 123115 ATCCAAAAGGAATCTACATTACATTTGGTTTTGCGTCTTCGAGGCGG 123069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410773519375100