Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq4450 226 3e-54 seq1314 154 2e-32 seq1636 116 4e-21 seq429 113 5e-20 seq830 100 3e-16 >seq4450 Length=177458 Score = 226 bits (250), Expect = 3e-54 Identities = 526/792 (66%), Gaps = 6/792 (1%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| || ||||||| |||||| || | || | ||||| || || ||| Sbjct 24926 GAGCCTTTGTTGCGCGATAACCCCAAACGTTATGTAGTGTTCCCAATCGTCTATAATGAC 24867 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 |||||| ||||| || | || ||||| || || |||| || | || || || || Sbjct 24866 ATGTGGAAGATGTATGAACAAGCTGAGGCCTCATTTTGGAAGGTTCATGAAGTTGATTTG 24807 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 || |||||| | || ||||| ||| || ||| |||||||||||| | Sbjct 24806 TCGAAGGACTACAAAGATTGGGAAAAAATGACTTCAAATGAGAAACATTTCATCAAGTAT 24747 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 ||| |||| ||||| || ||| || || || ||||| || || ||||| ||| | ||| Sbjct 24746 GTGTTGGCATTTTTTGCTGCCTCTGATGGTATTGTCAATGAAAACCTGGTAGAGAGATTC 24687 Query 116816 GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAG 116875 | | || || || || ||||| | |||||| ||| | ||||| ||||||||| Sbjct 24686 AGTAAAGAAGTACAAGTTATTGAGGCAAAATTCTTCTATGGCATGCAGATTGCCATGGAG 24627 Query 116876 AACGTGCACTCGGAAATGTA---TTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAG 116932 ||| | ||||| ||||| || | | || ||||| || | | | || Sbjct 24626 AACATACACTCACTGATGTACAGTTTGT---TGATAGACACTTATATCAAAGATGTGAAG 24570 Query 116933 GAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAG 116992 ||||| | | | || || || || || || || ||||| ||| ||||||| || Sbjct 24569 GAGAAAAGTTTTCTTCTTAATGCAATTGAAACTATTCCATGCGTGAAAAAGAAGGCTGAT 24510 Query 116993 TGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTC 117052 |||||| | ||||| || | ||| || | ||||| || | | || || || Sbjct 24509 TGGGCGTTAAATTGGATTTCCAGTCAAGAAGCGACATTCGGTGAAAGGGTCGTCGCTTTT 24450 Query 117053 GCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAA 117112 || || || ||||| | ||||| || |||||||||||| | || || ||||| ||||| Sbjct 24449 GCAGCAGTGGAGGGTATTTTCTTCTCCGGCAGTTTCGCCTCGATCTTCTGGCTGAAGAAG 24390 Query 117113 CGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTG 117172 || | |||||||| || |||||| ||||||| | ||||||||||| || | || Sbjct 24389 AAAGGATTGATGCCCGGTCTCACTTTCTCCAACGAGTTGATCTCCAGGGATGAAGCGATG 24330 Query 117173 CATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGC 117232 || ||| | || || |||||| |||| ||||| | |||||| || | || | | Sbjct 24329 CACTGCAAATTCGCGTGTTTGATGTTTAAGCACGTCGTGCAGAAGCCTTCAGAGGAGAGG 24270 Query 117233 GTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTG 117292 |||| | | ||| ||| || || || ||||| ||| || || |||||||| ||| Sbjct 24269 GTCAAGAACATCATCAGAGATGCCGTGAAGATCGAACAGGAGTTTCTTACCGAAGCCCTG 24210 Query 117293 CCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCC 117352 || || | || | || | ||||||| | |||| |||||||||| ||||| || Sbjct 24209 CCTGTATCTTTGATCGGCATGAATTGCGGACTTATGTGTGAATACATCGAATTCGTGGCT 24150 Query 117353 GACAGGCTGCTG 117364 |||| ||||||| Sbjct 24149 GACAAGCTGCTG 24138 >seq1314 Length=49468 Score = 154 bits (170), Expect = 2e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| || ||||| || ||||||||| |||| ||||| || || Sbjct 22234 ATGCAAATTTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTCGAGGTCGAGCCCTCC 22175 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | ||| | |||| || || | ||||||||||| |||||| | || ||| Sbjct 22174 GATACTATCGAAAATGTGAAGGCCAAGATCCAGGACAAAGAGGGAATCCCCCCAGATCAG 22115 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| | |||| ||| || || ||||| || || | ||||||||| |||||||||| Sbjct 22114 CAACGTTTGATCTTCGCCGGTAAGCAGCTCGAGGATGGACGCACCCTCTCCGACTACAAC 22055 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | || || || | |||||||| Sbjct 22054 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 22020 >seq1636 Length=121147 Score = 116 bits (128), Expect = 4e-21 Identities = 242/360 (67%), Gaps = 3/360 (1%) Strand=Plus/Minus Query 139348 CGGCTACGTGCTCGGCCTGCCGCGCGGCCTGCACGGCTTCCACGTGCACGAGTTCGGCGA 139407 |||| | ||| |||| || || ||||| ||||| |||||| | ||||||||||| || Sbjct 3147 CGGCGAGGTGTCCGGCTTGAAGCAGGGCCTCCACGGATTCCACATCCACGAGTTCGGTGA 3088 Query 139408 CGCGAGCAACGGGTGCACGTCGGCCGGCGAGCACTTCAACCCCGCGCGCCGGGACCACGG 139467 | | |||||| |||| |||||||| |||||||| || | || ||| ||||| Sbjct 3087 CAACACCAACGGTTGCATCTCGGCCGGGCCCCACTTCAATCCGCAGGGCAAGGATCACGG 3028 Query 139468 CGCGCCCGACGCCGAGATCAGGCACGTCGGCGACCTGGGCAACCTCGAGTCGGCGGGCCG 139527 || ||| | |||| | | |||||||| |||||||||||| | || ||| || | Sbjct 3027 CGGTCCCACCTCCGACGTACGTCACGTCGGTGACCTGGGCAACGTAGA---GGCCGGTAG 2971 Query 139528 CGACGCGCTCACCGAGGTGAGCCTGACGGACGGCGTCGTGTCCCTGTACGGTCCGCACAG 139587 | ||| || || |||| | | | ||| | | || ||| ||| |||| Sbjct 2970 CAACGGCGTCGCCATGGTGTCCATCTCCGACAAGGAGATCTCGTTGTTCGGCAACAACAG 2911 Query 139588 CATCATCGGACGGAGTCTGGTCGTGCACACGGACAGGGACGATCTGGGCCTCACCGACCA 139647 |||| | ||||| | || ||||| ||| | || ||||| |||| || || Sbjct 2910 CATCCTGGGACGCACCCTCGTCGTCCACGCCGATCCCGACGACATGGGAGCGGGCGGACA 2851 Query 139648 TCCATTGAGCAAGACCACCGGCAACTCGGGCGGCCGGCTCGCGTGCGGCATCATCGGGAT 139707 | | ||||||||||| || ||| | |||| || ||||| |||||| ||||||| || Sbjct 2850 CGAACTCAGCAAGACCACAGGAAACGCCGGCGCTCGTCTCGCTTGCGGCGTCATCGGCAT 2791 >seq429 Length=41586 Score = 113 bits (124), Expect = 5e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||||||||| | ||||| || ||||||||| | || ||||| | Sbjct 1339 AAAATGCAGATTTTCGTAAAAACTTTGACGGGTAAGACCATCACCCTTGAGGTCGAGCCT 1280 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||| | | | | | | |||| || || | ||||| ||||| || ||| | || Sbjct 1279 TCCGATACCATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGAATTCCCCCAGAT 1220 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 |||||||| || |||| ||| || || || || || || | || || || |||||| Sbjct 1219 CAGCAACGTCTTATCTTCGCCGGTAAGCAACTCGAGGATGGACGTACTCTGTCGGACTAC 1160 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||| |||| |||| | || | ||| | ||||| || Sbjct 1159 AACATCCAGAAGGAATCCACTTTGCACTTGGTCCTCCGCCTCAGGGGTGG 1110 >seq830 Length=194395 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| | || || ||||||||||| | || || || || | Sbjct 124909 ATGCAGATCTTTGTGAAAACCTTAACTGGTAAAACCATCACTTTGGAGGTTGAGCCCTCT 124850 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| | |||| || |||| ||||||||||| ||||| | || ||| Sbjct 124849 GATACCATTGAAAATGTGAAGGCTAAGATTCAAGACAAAGAGGGAATCCCACCTGATCAG 124790 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| | |||| ||| || ||||| |||| || | | || || ||||||||| Sbjct 124789 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCGGACTACAAC 124730 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| ||||| | || || ||| |||| ||||| Sbjct 124729 ATCCAAAAGGAATCTACACTTCATTTAGTATTGCG 124695 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| | || || ||||| ||||| | || || ||| | || Sbjct 123751 ATGCAGATCTTCGTTAAAACCTTGACTGGAAAAACTATCACTTTGGAAGTTGAACCATCC 123692 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | ||||| |||||| ||||| | ||||| || || |||||| | || || Sbjct 123691 GATACAATTGAAAACG-TCAAGGCTAAAATCCAAGACAAGGAAGGAATCCCCCCAGATCA 123633 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| ||| || ||||| |||| || | | || || || ||||| Sbjct 123632 GCAACGTTTAATCTTCGCCGGTAAACAATTGGAAGATGGCAGGACTCTGTCTGATTACAA 123573 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||| |||| || ||| | || ||||| Sbjct 123572 TATCCAGAAGGAATCCACTCTCCATTTGGTATTGCG 123537 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| | || || ||||||||||| | || || || | | Sbjct 123523 ATGCAGATTTTTGTGAAAACCTTAACTGGTAAAACCATCACTTTGGAGGTTGAGCCTTCT 123464 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||||| || |||| ||||| || || |||||| | || ||| Sbjct 123463 GACACTATTGAAAATGTCAAGGCTAAGATTCAAGACAAGGAAGGGATCCCCCCAGATCAG 123404 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| | || | || || |||||| |||| || | | || || ||||||||| Sbjct 123403 CAACGTTTGATTTTTGCCGGTAAACAGTTGGAAGATGGCAGGACTCTGTCTGACTACAAC 123344 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||| |||| || ||| | || ||||| Sbjct 123343 ATCCAGAAGGAATCCACTCTCCATTTGGTTTTGCG 123309 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| | || || |||||||| || | || || ||| | | Sbjct 124225 ATGCAGATCTTCGTTAAAACATTGACTGGAAAAACCATTACTTTGGAAGTTGAACCATCT 124166 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||||| |||||| ||||| | ||||| || || ||||| | || || Sbjct 124165 GACACAATTGAAAACG-TCAAGGCCAAAATCCAAGACAAGGAAGGAATCCCTCCAGATCA 124107 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| ||| || ||||| |||| || | | || || |||||||| Sbjct 124106 GCAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCAGACTACAA 124047 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||| ||||| | || || ||| | || ||||| Sbjct 124046 CATCCAAAAGGAATCTACCCTTCATTTGGTATTGCG 124011 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| | || || ||||| || ||| | || || ||| | | Sbjct 124453 ATGCAGATCTTCGTTAAAACCTTGACTGGAAAAACTATTACCTTGGAAGTTGAACCATCT 124394 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||||| | |||| ||||| | ||||| || || || || | || || Sbjct 124393 GACACAATTGAAAACG-TAAAGGCCAAAATCCAAGACAAGGAAGGAATTCCTCCAGATCA 124335 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| || || ||||| |||| || | | || || ||||||||| Sbjct 124334 GCAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCCGACTACAA 124275 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | || || ||| |||| ||||| Sbjct 124274 CATCCAGAAGGAATCTACTCTCCATTTAGTATTGCG 124239 Score = 91.5 bits (100), Expect = 2e-13 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| ||||| | ||||| || || ||||| | || || || |||| Sbjct 123068 AATGCAGATTTTCGTGAAAACTTTGACGGGAAAGACTATCACTTTGGAGGTGGA-GCCAT 123010 Query 40749 CG-ACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 || ||| | | |||| | |||| ||||||| |||||||| || || || | ||| Sbjct 123009 CGGACACAATTGAGAACG-TAAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGAC 122951 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 |||||||| | || | ||||| || || |||| || | | || | || || Sbjct 122950 CAGCAACGTTTGATTTTTGCGGGTAAGCAATTGGAGGATGGTAGAACTTTGTCGGATTAT 122891 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| ||||||||| |||| || ||||||||||| || Sbjct 122890 AACATTCAGAAGGAGTCCACCCTCCATCTAGTGTTACG 122853 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || |||||||| | || || |||||||||||| | || || ||| | || Sbjct 123295 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATCACCTTAGAAGTTGAACCATCC 123236 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | || |||| | |||| ||||||| ||||| || || || || | || || Sbjct 123235 GATACAATTGAGAACG-TTAAGGCCAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCA 123177 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| ||| || |||||| |||| || | | ||| | || ||||| Sbjct 123176 GCAACGTTTGATCTTCGCAGGTAAACAGTTGGAGGATGGCAGGACCTTGTCTGATTACAA 123117 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| ||||| | || | ||| | || ||||| Sbjct 123116 TATCCAAAAGGAATCTACATTACATTTGGTTTTGCG 123081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515189252884000