Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1383 111 1e-19 >seq1383 Length=53393 Score = 111 bits (122), Expect = 1e-19 Identities = 229/337 (68%), Gaps = 4/337 (1%) Strand=Plus/Plus Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTT 20274 || || || |||||||| | |||||||| |||||||| |||| || || | || | Sbjct 31802 GAAGGTGACTTGGGTCCAATTTATGGATTCCAATGGAGGCATTACGGTGCCAAGTACGAA 31861 Query 20275 GACATGAACACAAATTATTTTGGACAAGGAGTA--GATCAATTACAAAATGTTATTAATT 20332 | ||| || | |||| |||||| ||| |||||| | || || || || | Sbjct 31862 GGGATGCACGCCGATTACACCA-ACAAGG-GTATTGATCAACTGCACAACGTGATCCAGA 31919 Query 20333 TAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATG 20392 || || | | |||||||| || || || || | ||||| ||||| | | || Sbjct 31920 CGATCAAGAATAGACCAAACGATAGGAGGATCATAATGTGCGCTTGGAATCCAATCGACA 31979 Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATG 20452 | || |||||||| || || |||||| || |||||||||||||||||| | Sbjct 31980 TTCCGCAGATGGCTTTACCGCCTTGTCATTGTCTCGTCCAATTTTACGTTGCTAACGGAG 32039 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 | ||| || | | || || ||||||| ||||||||||| || ||||| ||||| | Sbjct 32040 AGTTGAGCTGCCTGCTTTACCAGAGATCCGCGGATATGGGACTCGGAGTTCCGTTCAACA 32099 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549 | || ||||| || | ||||| || ||||| ||||| Sbjct 32100 TCGCCAGTTACGCTTTACTTACCTACATGATGGCACA 32136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399161377494250