Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq830 149 6e-31 seq1314 114 1e-20 seq429 107 2e-18 >seq830 Length=194395 Score = 149 bits (164), Expect = 6e-31 Identities = 183/249 (73%), Gaps = 1/249 (0%) Strand=Plus/Plus Query 94760 GGTTTTTT-AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTC 94818 ||||||| |||| ||| || ||||| | | ||||| ||||| || | ||| ||||| Sbjct 123275 GGTTTTTACAAAAATTTGCATACCTCCACGAAGACGCAAAACCAAATGGAGAGTGGATTC 123334 Query 94819 CTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGAT 94878 ||| || | ||| || || || ||| || ||| |||| |||||| ||| |||| || Sbjct 123335 CTTCTGGATGTTGTAGTCAGACAGAGTCCTGCCATCTTCCAACTGTTTACCGGCAAAAAT 123394 Query 94879 TAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCC 94938 || | |||||||||||| || || ||||| ||||| | ||| || |||||||| | Sbjct 123395 CAAACGTTGCTGATCTGGGGGGATCCCTTCCTTGTCTTGAATCTTAGCCTTGACATTTTC 123454 Query 94939 GACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 | |||||||| | || || || | ||||||||||| ||||| | ||||||||||| Sbjct 123455 AATAGTGTCAGAAGGCTCAACCTCCAAAGTGATGGTTTTACCAGTTAAGGTTTTCACAAA 123514 Query 94999 GATCTGCAT 95007 |||||||| Sbjct 123515 AATCTGCAT 123523 Score = 147 bits (162), Expect = 2e-30 Identities = 176/239 (74%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| | | || ||| |||| | ||||| ||||| || || |||||||||||||| | Sbjct 123057 AAAATCTGCATTCCGCCTCGAAGACGCAAAACCAAATGTAATGTAGATTCCTTTTGGATA 123116 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || ||||| || || || |||||||| |||||| || | ||||| || | |||| Sbjct 123117 TTGTAATCAGACAAGGTCCTGCCATCCTCCAACTGTTTACCTGCGAAGATCAAACGTTGC 123176 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 |||||||||||||||||||| ||||| | |||||| ||||| ||| | | || || Sbjct 123177 TGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTGGCCTTAACGTTCTCAATTGTATCG 123236 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | || || || | ||||||||||||||||| | ||||| ||||| || ||||| Sbjct 123237 GATGGTTCAACTTCTAAGGTGATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 123295 Score = 136 bits (150), Expect = 4e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| ||||| || | |||||||||||||| | ||| || || || ||| || | Sbjct 124011 CGCAATACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGACAGAGTCCTGCCA 124070 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| ||||| || | ||||| || | ||||||||||||||| || ||||| ||| Sbjct 124071 TCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCCTTG 124130 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| ||||||||| | | ||||||| | || || || | || ||| Sbjct 124131 TCTTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCCAAAGTAATG 124190 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| | ||||| || ||||||||||| Sbjct 124191 GTTTTTCCAGTCAATGTTTTAACGAAGATCTGCAT 124225 Score = 136 bits (150), Expect = 4e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| || || || | |||||||||||| || | ||| || ||| || ||| || | Sbjct 124239 CGCAATACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCA 124298 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| ||||| || ||||||| || | |||||||||||||||||| ||||| ||| Sbjct 124299 TCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCTTCCTTG 124358 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| ||||| ||| | | ||||||| | || || || | || || Sbjct 124359 TCTTGGATTTTGGCCTTTACGTTTTCAATTGTGTCAGATGGTTCAACTTCCAAGGTAATA 124418 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| | ||||| || ||||||||||| Sbjct 124419 GTTTTTCCAGTCAAGGTTTTAACGAAGATCTGCAT 124453 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| ||||| || | ||| |||||||| || | || ||||| || ||| || | Sbjct 123537 CGCAATACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAATCAGACAGAGTCCTGCCA 123596 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| ||||| ||| | |||||||| | |||||||||||| || || ||||| ||| Sbjct 123597 TCTTCCAATTGTTTACCGGCGAAGATTAAACGTTGCTGATCTGGGGGGATTCCTTCCTTG 123656 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| ||||||||| | | || || | | || || || | ||||| Sbjct 123657 TCTTGGATTTTAGCCTTGACGTTTTCAATTGTATCGGATGGTTCAACTTCCAAAGTGATA 123716 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| | ||||| || ||||||||||| Sbjct 123717 GTTTTTCCAGTCAAGGTTTTAACGAAGATCTGCAT 123751 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| || || || | |||||||||||||| | ||| || || || ||| || | Sbjct 124695 CGCAATACTAAATGAAGTGTAGATTCCTTTTGGATGTTGTAGTCCGACAGAGTCCTGCCA 124754 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| ||||| || | ||||| || | ||||||||| || || || || |||||| Sbjct 124755 TCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGTGGGATTCCCTCTTTG 124814 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || ||||| || | | || |||| | | || || || | |||||| Sbjct 124815 TCTTGAATCTTAGCCTTCACATTTTCAATGGTATCAGAGGGCTCAACCTCCAAAGTGATG 124874 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 ||||| ||||| | |||||||||||||||||||| || Sbjct 124875 GTTTTACCAGTTAAGGTTTTCACAAAGATCTGCATCCT 124912 Score = 120 bits (132), Expect = 3e-22 Identities = 174/246 (71%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 94762 TTTTTTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTT 94821 |||| |||| ||||| |||||| | ||| || || |||||||| | || |||||||| Sbjct 122594 TTTTGTAAATGTTTACTGTCCTCCACGCAAACGTAAAACCAAGTGAAGGGTTGATTCCTT 122653 Query 94822 TTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAA 94881 || | ||| || || || ||| || ||| |||| || || || |||| || || Sbjct 122654 CTGGATGTTGTAGTCAGACAGAGTTCTGCCATCTTCCAATTGCTTGCCAGCAAAAATCAA 122713 Query 94882 TCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGAC 94941 | ||||||||||| ||||| ||||| || || | ||||| || || ||| ||| Sbjct 122714 ACGCTGCTGATCTGGTGGAATTCCTTCCTTATCCTGGATTTTGGCTTTAACGTTCTCGAT 122773 Query 94942 AGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGAT 95001 || |||| | || || || | ||||| || ||||| || | |||||| || ||||| Sbjct 122774 TGTATCAGACGGTTCCACCTCCAAAGTGATAGTCTTTCCCGTCAAAGTTTTTACGAAGAT 122833 Query 95002 CTGCAT 95007 |||||| Sbjct 122834 CTGCAT 122839 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 || ||||| | || | || || ||||| || | ||||||||| || ||| | | Sbjct 122853 CGTAACACTAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCCGACAAAGTTCTACCA 122912 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||| || || || |||| || || | |||||| ||||||||||||||||||||| Sbjct 122913 TCCTCCAATTGCTTACCCGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTG 122972 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||| ||||| ||| | | ||||| | | || || || | ||||| Sbjct 122973 TCTTGAATTTTAGCCTTTACGTTCTCAATTGTGTCCGATGGCTCCACCTCCAAAGTGATA 123032 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || | ||||||||| || |||||||| Sbjct 123033 GTCTTTCCCGTCAAAGTTTTCACGAAAATCTGCAT 123067 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| ||||| || | || ||||||||||| | ||| || || || ||| || | Sbjct 124467 CGCAATACCAAATGAAGGGTGGATTCCTTTTGAATGTTGTAGTCCGACAGAGTCCTGCCA 124526 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| || || || | ||||| || | ||| |||||||| || || ||||| ||| Sbjct 124527 TCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTG 124586 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| || ||||| | | ||||||| | || || || | || ||| Sbjct 124587 TCTTGGATTTTGGCTTTGACATTTTCAATTGTGTCAGATGGTTCAACTTCCAAGGTAATG 124646 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| | ||||| |||||||||||||| Sbjct 124647 GTTTTTCCAGTCAAGGTTTTAACAAAGATCTGCAT 124681 Score = 107 bits (118), Expect = 2e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || ||||| || ||| || ||| |||| ||||||||| | |||||||| | |||| Sbjct 123819 TTGTAATCAGACAGAGTCCTGCCATCTTCCAATTGTTTTCCGGCGAAGATTAAACGTTGC 123878 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 |||||||| || || ||||| ||||| | ||||| ||||| ||| | | || || Sbjct 123879 TGATCTGGGGGGATTCCTTCCTTGTCTTGGATTTTGGCCTTAACGTTCTCAATTGTATCG 123938 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | || || || | ||||||||||||||||| | ||||| || ||||||||||| Sbjct 123939 GATGGTTCAACTTCTAAAGTGATGGTTTTTCCAGTCAATGTTTTAACGAAGATCTGCAT 123997 >seq1314 Length=49468 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||||||||||||| | || || ||||| || | ||| || ||| | ||| | Sbjct 22020 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCA 22079 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || ||| | ||||| || | |||||||||||| || || || |||||| Sbjct 22080 TCCTCGAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCTGGGGGGATTCCCTCTTTG 22139 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| || ||| ||| || | | | ||||| || | |||||| Sbjct 22140 TCCTGGATCTTGGCCTTCACATTTTCGATAGTATCGGAGGGCTCGACCTCGAGGGTGATG 22199 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 || || || || || |||||||| || || ||||| || Sbjct 22200 GTCTTACCCGTTAGGGTTTTCACGAAAATTTGCATCCT 22237 >seq429 Length=41586 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||||||||| |||||||| || | ||| || || || ||| |||||| Sbjct 1128 ACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTACGTCCATCCTCG 1187 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || || || ||| | ||||| | | |||||||||||| ||||| || || ||||| | Sbjct 1188 AGTTGCTTACCGGCGAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCCTTGTCTTGG 1247 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| || ||| || || | | ||||| |||| |||||||| || Sbjct 1248 ATCTTGGCCTTCACATTCTCGATGGTATCGGAAGGCTCGACCTCAAGGGTGATGGTCTTA 1307 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | |||||| || || |||||||| Sbjct 1308 CCCGTCAAAGTTTTTACGAAAATCTGCAT 1336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448265143074000