Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1908 159 3e-34 seq4241 149 6e-31 seq830 102 8e-17 >seq1908 Length=44741 Score = 159 bits (176), Expect = 3e-34 Identities = 672/1038 (65%), Gaps = 36/1038 (3%) Strand=Plus/Minus Query 147449 ATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGT 147508 ||| ||||||| ||| | | || || | | ||||| || ||| | |||||| || Sbjct 6041 ATGATGATTGATAACTGGGAATTCTCCAGCTTGCACTCTGCGAGTGTAAATATTACTTGT 5982 Query 147509 AAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTA 147568 |||| |||| ||||| || || |||| ||| || ||||| | ||||| ||||| Sbjct 5981 GTACGGTTCGATGGACTCATTATTTCCTAAAATTTGGGCAGTACTAGCCGTTGGCATAGG 5922 Query 147569 AGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCT-CGCTTAAGCTCGTCCC 147627 ||| | | | ||||| | | |||||| | || |||| | | ||||| | ||| Sbjct 5921 AGCTAGAAGGAGAGAATTCCTGATTCCGTGCTTGGCGATTTTTTCTTTTAAGGCAG-CCC 5863 Query 147628 AGTTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAAC 147687 | | ||| | ||| | | | |||| |||||||| |||| | |||| || ||| || Sbjct 5862 AATCCCATAAATCTGTTGGT--GTTAC-ATTCCACATATCATATTGTAGAATTCCCTTAC 5806 Query 147688 TTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTT 147747 | || || ||| ||||| | ||||| ||| | || ||| | ||| | | | Sbjct 5805 TGGCCGGAGATCCTTCGTATGTCGAGTATGGTCCATCTCTTTCAGCAATTTC-ACAGCTG 5747 Query 147748 GACT-TAGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCTCT 147806 |||| || || |||||||||| ||| || | |||| | ||| | | | || ||| Sbjct 5746 GACTCTAAAGCTCCATAATAAAGAGTCTCGAATATCTGTACATTAACCTTTTGTGCTTCT 5687 Query 147807 TGGCTGTCGTAGGGCATATCCAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATA 147866 | ||| ||| | || || || | | || | ||| || | ||| || ||||| ||| Sbjct 5686 TCGCTTTCGAACGGAATCCTCATCAAGATAAAAGCATCGGCCAATCCCTGTATACCAATA 5627 Query 147867 CCGATGGGTCGGTGTCTGAAATTCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAAG 147926 || || || || ||||| | ||| || | ||| || | |||||| | || | | Sbjct 5626 CCAATTGGACGATGTCTCATATTTGAGTTTCTAGCTTCAGGTACAGGATAATAGTTGATG 5567 Query 147927 TCGATAATTTTATTGAGATTATTGGTAACCACTCTAGATACAT--TGTAGAGCGACTTAA 147984 ||||| || || || ||||| | ||||| | | | | | | | || || | | Sbjct 5566 TCGATGATCTTGTTCAGATTTCTAGTAACTAGTTTGGTAAGTTCCTTTAATTTGA--TGA 5509 Query 147985 AGTCGAAGCTTTTAAACTG--TTTATTGGCAAAATTATTTACGGCAATCGAGGCCAAGTT 148042 ||||||| |||| ||| |||| |||| |||| |||||||| || ||||| || Sbjct 5508 AGTCGAAAGATTTAT-CTGGCTTTA----CAAACATATTAACGGCAATGGACGCCAAATT 5454 Query 148043 ACACACGGCCGTTTC-TCGATTGTCGC--TATATTGAACGATTTCGGCACACAGATT--- 148096 || ||||| ||||| ||| | ||| |||||| | ||||| | |||||||| Sbjct 5453 GCAGACGGCAGTTTCATCG---GGCGCAGTATATTCCATAATTTCTGTGCACAGATTCGA 5397 Query 148097 GCTGTTTCGAATCACTCCCTCGtttttttGATTATTTTTATTGTTAACGTGATCTTTAAA 148156 ||| || || | | ||| || ||||| ||| | || ||| | ||| || | Sbjct 5396 GCTCTT--GATTGTC-CCCAAATTCTTTTGGTTACTCTTTGAGTTGCAGGCATCCTTGTA 5340 Query 148157 CATCATGTATGGAGCTCCGGTCTCGACTTGAGTCTCAATAATTTTTCTATGAAGATCTAA 148216 || ||| || ||| | || ||| | ||| | || |||| | || ||| Sbjct 5339 CAGCATATAAGGAACACCAACCTCAATTTGCGAGATAACAATTGCGCGCCAAACTTCTCT 5280 Query 148217 AGCCGAAATTTGTTTTTTAAACTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAA 148276 ||||| || ||||| ||| | || ||||| || ||||| ||||| || || | ||||| Sbjct 5279 AGCCGGTATCTGTTTGTTATATTTACCTTCAGCTTCGTATTTTTCATAGAGCTTTTCGAA 5220 Query 148277 TTCTTGGCCATAGCAATCGTTTAAACCGGGACACTCGTCGGGGCACATCAATGACCATTT 148336 |||| ||| |||| || ||| || ||||||| | |||||||||| |||||| Sbjct 5219 CTCTTCGCCCCAGCATTCCGATAATCCTGGACACTTATGAGGGCACATCAGTGACCAGAC 5160 Query 148337 CCCTCCTGTCTTTACCCTCTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATC 148396 | | || | ||| | |||||||| | || ||| |||||| ||| ||| | ||| Sbjct 5159 ACTATCAGTGTCTACACGTTTCATAAATAAGTCTGGTATCCACAAAGCATAAAACAAATC 5100 Query 148397 GCGAGCCTTCATATCCTCGGCAC--CCA-TATTGCGCTTTAGATCCaaaaaagtaaaaaC 148453 | || || | ||||| || ||| |||| ||||||| ||| || | || Sbjct 5099 TCTGGC--TCTT-TCCTCTTCATTTCCAGTATTCTTTTTTAGATTCAAGAATTCCATAAT 5043 Query 148454 GTCTGCGTGCCAAGGCTC 148471 ||| || ||||||||||| Sbjct 5042 GTCAGCATGCCAAGGCTC 5025 >seq4241 Length=192509 Score = 149 bits (164), Expect = 6e-31 Identities = 687/1072 (64%), Gaps = 26/1072 (2%) Strand=Plus/Plus Query 147449 ATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAAT--TACTA 147506 ||| ||||||| ||| || | || || | | ||||| || ||| |||| |||| Sbjct 51976 ATGATGATTGATAACTGGAAATTCTCCGGCTTGCACTCTACGA--GTATAAATGTTACTT 52033 Query 147507 GTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATG 147566 || |||| ||||| ||||||||||| |||| ||| || ||||| | || || ||||| Sbjct 52034 GTGTACGGTTCGAAGGACTCGTTGTTTCCTAAAATTTGGGCAGTGCTAGCTGTTGGCATA 52093 Query 147567 TAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCC 147626 |||| | | ||||| | | |||||| | || |||| | ||| | || || Sbjct 52094 GGTGCAAGAAGGAGAGAATTCCTGATTCCGTGCTTGGCGATTTTTTCCTTTAAGGCGGCC 52153 Query 147627 CAGTTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAA 147686 || | ||| || || | | | |||| |||||||| ||| | || | || ||| Sbjct 52154 CAATCCCATAGGTCTGTTGGT--GTTAC-ATTCCACATATCGTATTGGAGAATTCCCTTG 52210 Query 147687 CTTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTT 147746 || || || ||| | |||| || | ||| | || ||| | ||| | | | Sbjct 52211 CTGGCCGGAGATCCTTTATAAGTTGAATACGGTCCATCTCTTTCAGCGATTTC-ACAGCT 52269 Query 147747 TGACT-TAGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCTC 147805 | | || || ||||| |||| ||| || | |||| | |||||| | | || || Sbjct 52270 CGTTTCTAAAGCTCCATAGTAAAGAGTCTCGAATATCTGTACATTTAACTTTTGTGCTTC 52329 Query 147806 TTGGCTGTCGTAGGGCATATCCAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGAT 147865 || ||| ||| | || || || | | || | ||| || | || || |||||||| Sbjct 52330 TTCGCTTTCGAACGGAATCCTCATCAAGATAAAAGCATCGGCCAAACCCTGTATACCGAT 52389 Query 147866 ACCGATGGGTCGGTGTCTGAAATTCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAA 147925 ||| || || || ||||| | ||| || | ||| || || ||||| | || | Sbjct 52390 ACCAATTGGACGATGTCTCATATTTGAGTTTCTAGCTTCAGGCACAGGATAGTAGTTGAT 52449 Query 147926 GTCGATAATTTTATTGAGATTATTGGTAACCACTCTAGATACATTGTAGAGCGACTTAAA 147985 |||||| || || || ||||| | ||||| | | | | | | | || | || Sbjct 52450 GTCGATGATCTTGTTCAGATTTCTAGTAACTAGTTTGGTGAGTTCCTTCAGTTTGATGAA 52509 Query 147986 GTCGAAGCTTTTAAACTGTTTATTGGCAAAATTATTTACGGCAATCGAGGCCAAGTTACA 148045 ||||| |||| ||| || | |||| | || |||||||| || || || ||||| Sbjct 52510 ATCGAATGATTTAT-CTGGTTTTA--CAAACATGTTAACGGCAATTGACGCTAAATTACA 52566 Query 148046 CACGGCCGTTTC-TCGATTGTCGC--TATATTGAACGATTTCGGCACACAGATTGCTG-T 148101 ||||| ||||| ||| | ||| | |||| || ||||| | ||||| || | | Sbjct 52567 GACGGCAGTTTCGTCG---GGCGCAGTGTATTCCACTATTTCTGTGCACAGGTTCGAGCT 52623 Query 148102 TTCGAATCACTCCCTCGtttttttGATTATTTTTATTGTTAACGTGATCTTTAAACATCA 148161 || || | | ||| || | ||| || | || ||| | ||| || |||||| Sbjct 52624 TTTGATTGTC-CCCAAATTCTGTTGGTTGCTCTTCGAGTTGCAGGCATCCTTGTACATCA 52682 Query 148162 TGTATGGAGCTCCGGTCTCGACTTGAGTCTCAATAATTTTTCTATGAAGATCTAAAGCCG 148221 |||| ||| | || ||| | ||| | || |||| | || ||| ||||| Sbjct 52683 TGTAAGGAACACCAACCTCAATTTGCGAGATAACAATTGCGCGCCAAACTTCTCTAGCCG 52742 Query 148222 AAATTTGTTTTTTAAACTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTT 148281 ||| ||||| ||| | || |||||||| ||||| ||||| || || | ||||| |||| Sbjct 52743 GAATCTGTTTGTTATATTTTCCTTCGGCTTCGTATTTTTCATAGAGCTTTTCGAACTCTT 52802 Query 148282 GGCCATAGCAATCGTTTAAACCGGGACACTCGTCGGGGCACATCAATGACCATTTCCCTC 148341 ||| |||| || || || ||||||| | |||||||||| |||||| | Sbjct 52803 CGCCCCAGCAGTCCGACAATCCAGGACACTTATGAGGGCACATCAGTGACCAGACACTAT 52862 Query 148342 CTGTCTTTACCCTCTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAG 148401 | | || ||| | |||||||||| || ||| |||||| |||| ||| | ||| | | Sbjct 52863 CAGCCTCTACGCGTTTCATAAACAAGTCCGGTATCCACAAGGCATAAAACAAATCCCTGG 52922 Query 148402 CCTTCATATCCTCGGCA---CCCATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTG 148458 | || | ||||| || ||| |||| | || |||| || || | || ||| | Sbjct 52923 C--TCTT-TCCTCTTCATTTCCCGTATTCCTTTTCAGATTCACGAATTCCATAATGTCAG 52979 Query 148459 CGTGCCAAGGCTCGATGTATACGGTCATGGCGCCTTTCCTTTTACCTCCTTG 148510 | ||||||||||| | || || | | || ||| ||| |||| ||||| Sbjct 52980 CATGCCAAGGCTCCAAATACACCGCAACGGAGCCAGGTCTTCTACCACCTTG 53031 >seq830 Length=194395 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||||||||| || ||||||||| | |||||| | ||| | ||| || | Sbjct 123295 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATCACCTTAGAAGTTGAACCATCC 123236 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || ||| | || || || ||| ||||| ||||| || ||||| ||||| Sbjct 123235 GATACAATTGAGAACGTTAAGGCCAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAG 123176 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | || || ||||| | || |||| || | | | || || || Sbjct 123175 CAACGTTTGATCTTCGCAGGTAAACAGTTGGAGGATGGCAGGACCTTGTCTGATTACAAT 123116 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || ||||| |||||||| | ||| |||| || | ||| |||| |||| Sbjct 123115 ATCCAAAAGGAATCTACATTACATTTGGTTTTGCGTCTTCGAGGCGGAA 123067 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| || ||||||||| | || ||| | ||| | ||| || Sbjct 124681 ATGCAGATCTTTGTTAAAACCTTGACTGGAAAAACCATTACCTTGGAAGTTGAACCATCT 124622 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| || || ||||| ||||| || || || |||||| Sbjct 124621 GACACAATTGAAAATGTCAAAGCCAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAA 124562 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | || || || ||| | ||||||| || | | ||||| ||| Sbjct 124561 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGGACTCTGTCGGACTACAAC 124502 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| ||||| || | ||| |||| || | ||| | || || Sbjct 124501 ATTCAAAAGGAATCCACCCTTCATTTGGTATTGCGTCTTCGCGGTGG 124455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478634577748000