Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4241 196 1e-44 seq4643 156 1e-32 seq3863 91.5 4e-13 >seq4241 Length=192509 Score = 196 bits (216), Expect = 1e-44 Identities = 1050/1650 (64%), Gaps = 42/1650 (3%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||||||| | || ||||||||||| ||| | || ||| | ||||| ||| | ||| Sbjct 53406 ATTGTTGAGAGGCCTCAGCATATGTTGATGAGAGTGGCTGTAGGTATACATGGGGAGGAC 53347 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT--GTA-TTCACGCACGCC 363558 | | | || ||||| ||||| | || | || || ||| ||||| || || Sbjct 53346 ATCAAGTCTGCAATTGAGACATACCA--TTACATGT-CTGAAAAGTACTTCACCCATGCT 53290 Query 363559 ACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTA 363618 | ||||| | | | ||||| |||| || |||||| || || || ||| | || Sbjct 53289 AGTCCAACGTTATTCTCCGCTGGCACTCCTAGACCACAGTTGAGCTCATGTTTTTTACTG 53230 Query 363619 AAAATGAAGGACGATTCCATCGAGGGTATCTTTGACA-CACTTAAGAATTGTGCTCTTAT 363677 | ||| || ||||| | || || || | | | | || ||| ||||| || Sbjct 53229 ATGATGCCAGAAGATTCACTTGATGGGATTTATAAATGCGTTTCAGA-TTGTGTGAAGAT 53171 Query 363678 TTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAG--AACAGT 363735 | ||||| ||| || || ||||| | || |||||| | | ||| | |||| | Sbjct 53170 TACCAAGTCTGCTGGTGGTATTGGAATTAACATTCACAATATAAGAGCAGCGGGAACACT 53111 Query 363736 TACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 | || ||| ||||| | ||| |||| | || || ||| | ||||| || Sbjct 53110 GA--TTAAGAGCAATGGGGGTAAATCGGATGGAATTGTGCCTATGTTGAAAGTGTTCAAC 53053 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855 | || |||||| |||| |||| ||||| ||| | || | |||| ||||| Sbjct 53052 CAAACAGCGAGGCACGTGAACCAAGGTGGTAGAAGACCT---GGCTCCGTTGCGGTGTAT 52996 Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA--AACACGGGAA 363913 | |||||| ||||| || ||| | || || | ||| || | ||| || ||||||| Sbjct 52995 TTGGAGCCTTGGCATGCTGACATTATGGAATT-CGTGAA-TCTGAAAAGGAATACGGGAA 52938 Query 363914 A---AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTA 363970 | ||||||| | || | ||| |||| ||||| | ||| | | ||| |||| Sbjct 52937 ATGAAGAGGAAA---GAGCCAGGGATTTGTTTTATGCCTTGTGGATACCGGACTTGTTTA 52881 Query 363971 TGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTC 364030 |||| ||||| ||||| | || |||||||| | ||||| || | ||||| || Sbjct 52880 TGAAACGCGTAGAGGCTGATAGTGTCTGGTCACTGATGTGCCCTCATAAGTGTCCTGGAT 52821 Query 364031 TTTCCGATGTATGGGGTGACGACTATGTT--GCTCTATACGAAAAGTATGAATCGGAGGG 364088 | || || ||||| || || | | ||||||| ||||| || ||| | || || Sbjct 52820 TGTCGGACTGCTGGGGCGAAGAGTTCGAAAAGCTCTAT--GAAAAATACGAAGCCGAAGG 52763 Query 364089 AAAGGCTCGTAAGACA-ATTCCCGC-ACAGAAGCTATGGTTTGCCATCATGGATTCGCAG 364146 ||| | || ||| ||||| || | ||||| | ||| || || | ||||| Sbjct 52762 AAAATATAACAA-ACAGATTCCGGCTAGAGAAGTT-TGGCGCGCAATTGTTATCTCGCAA 52705 Query 364147 ATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAG 364206 |||||| || || || ||| ||||||| ||| | |||||| ||| |||||| Sbjct 52704 ATTGAGGTTGGTGTTCCTTACATGATGTACAAGGATGCCTGCAACTCGAAGAGCAACCAA 52645 Query 364207 CAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGC 364265 ||| | | || ||||| || || | ||||| || || || || | |||||||| || Sbjct 52644 CAGAATTTGGGGACAAT-CAAAAGCTCGAACCTGTGCACAGAAATAGTGGAATACACTGC 52586 Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGA 364325 |||||||| |||||||| ||||| | ||||| || || || |||||||||| Sbjct 52585 GCCCGACGAAACTGCCGTCTGTAATTTAGCGTCAATTGCCGTTAACATGTTTGTAAAACC 52526 Query 364326 TGGTA---CTTTTGAC--CACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAAT 364380 | || | || || || || | || | || | ||| | | | |||| | ||| Sbjct 52525 AGATAAATCATTCGATTTCATCA--AACTGAAGGAACTCACCAAACTAGTTACTAGAAAT 52468 Query 364381 CTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATG 364440 || ||||| | ||||||| || || ||||| | |||||||| || |||||| Sbjct 52467 CTGAACAAGATCATCGACATCAACTACTATCCTGTGCCTGAAGCTAGAAACTCAAATATG 52408 Query 364441 CGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAG 364500 | ||||| || |||||| | ||| ||||||| | || || | |||||| || | | | Sbjct 52407 AGACATCGTCCAATTGGTATCGGTATACAGGGTTTGGCCGATGCTTTTATCTTGATGAGG 52348 Query 364501 ATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTAT 364560 || | || || || || | ||||| |||| || || || | || Sbjct 52347 ATTCCGTTCGAAAGCGAAGAAGCACAAAAGTTAAATGTACAGATATTCGAGACTCTTTAC 52288 Query 364561 TTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTAT 364620 | || || | | ||||| | || ||| | ||| ||| || |||||| Sbjct 52287 TATGGAGCTTTAGAAACGAGCTGTGAAATCGCTGAAAGAGATGGACCGTATTCAACTTAT 52228 Query 364621 GAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCT 364680 | || || || |||||| |||| | ||| | |||||||| || ||| | Sbjct 52227 AAAGGATCTCCGGCCAGCAAGGGAATTCTCCAATACGATATGTGGAATGTAACACCAACA 52168 Query 364681 GTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCC 364740 | || |||| | |||| | || || | ||||| || | | || || Sbjct 52167 GACCTATGGGATTGGGCCGCCTTAAAGGAAAAAATCGCCAAGCACGGAATCAGGAATTCT 52108 Query 364741 CTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGC 364800 ||| || || || ||||| || ||| ||||| || || | ||||||||||||| | Sbjct 52107 CTCCTTCTTGCACCTATGCCAACAGCTAGCACTGCCCAAATTTTAGGAAACAACGAGTCC 52048 Query 364801 TTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTA 364860 |||||||||| ||||| || ||||| | || | || | ||||||||||||| || Sbjct 52047 TTCGAACCGTACACAAGTAACATTTATACTCGTAGAGTGCAAGCCGGAGAATTTCCAGTT 51988 Query 364861 GTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAG 364920 | ||| | | || | |||||||| || | || ||||||| | |||||| Sbjct 51987 ATCAATCATCATTTATTGAAGGATCTAGTTGAACTAGGCCTGTGGGACGCGGTGATGAAG 51928 Query 364921 AACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTG 364980 ||| | | |||||| ||||||| | || ||||| || | ||||||| || | Sbjct 51927 AACCAACTTATCGCCAACTATGGTTCCATCCAAAACATCCCTACAATTCCAGATAATATC 51868 Query 364981 AAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCC 365040 ||| | | || ||||| || ||||| || || | | ||| | || | ||||| || Sbjct 51867 AAGAGTTTGTATAAAACTGTGTGGGAGATCTCGCAGAGGACTTTGATCAACATGGCTGCA 51808 Query 365041 GATCGCGGTGCTTTTATCTGTCAGAGCCAG 365070 ||| | || || ||||| |||||||||| Sbjct 51807 GATTGTGGCGCCTTTATAGATCAGAGCCAG 51778 >seq4643 Length=985661 Score = 156 bits (172), Expect = 1e-32 Identities = 693/1067 (65%), Gaps = 39/1067 (4%) Strand=Plus/Plus Query 363444 TGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGT 363503 |||||| | || ||||| ||| | ||| | || ||| | ||||| || | |||| | Sbjct 332804 TGTTGAGAGACCTCAGCACATGCTGATGAGAGTGGCTGTGGGTATACACGGGGAGGATAT 332863 Query 363504 TGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT--GTATT-CACGCACGCCAC 363560 | | | || ||||| ||||| | || || || || ||||| ||| || || | Sbjct 332864 TAAGTCTGCAATTGAGACATACCA--TTATATGT-CTGAAAAGTATTTCACCCATGCTAG 332920 Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAA 363620 |||||| | | | ||| || |||| ||| |||||| || || || ||| | | | Sbjct 332921 TCCAACATTATTCTCTGCAGGCACTCATAAGCCACAGTTGAGCTCATGTTTTTTATTGAT 332980 Query 363621 AATGAAGGACGATTCCATCGAGGGTATCTTTGACA-CACTTAAGAATTGTGCTCTTATTT 363679 ||| || ||||| || | || || | | | || || || |||||| | |||| Sbjct 332981 GATGCCAGAAGATTCAATTGTTGGGATTTATAAATGCATTTCTGA-TTGTGCAATGATTT 333039 Query 363680 CCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA-CAG-AACAGTTA 363737 | ||| ||| || || ||||| | || || ||| | | ||| ||| |||| | Sbjct 333040 CAAAGTCTGCTGGTGGCATTGGAATTAATATTCATAATATAAGAGCAGCAGGAACACCAA 333099 Query 363738 CATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT-GTGTTTGACA 363796 || || ||||| || | ||| |||| ||| ||| ||| ||||| ||| Sbjct 333100 --TTATTGGTACAGGCGGTAAATCGGATGGTTCAATTCGGATGGTTCAAAGTGTTCAACA 333157 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 |||| ||||||||||| |||| ||||| || || || || ||||| ||||| Sbjct 333158 ATACAGCGAGGTACGTGAACCAAGGTGGTAGA---CGACCTGGTGCTGTTGCTGTGTATT 333214 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACAC-GGGAA-- 363913 | ||||| ||||| |||||| | || || || | || || || || ||||| Sbjct 333215 TGGAGCCGTGGCATGCAGATATTATGGAATTCCTGAATCTAAAAAAGAATACAGGGAATG 333274 Query 363914 AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973 |||||||| | || | ||| |||| ||||| | ||| | | ||| ||||||| Sbjct 333275 AAGAGGAA---AGAGCCAGGGATTTGTTTTATGCCTTGTGGATACCAGACTTATTTATGA 333331 Query 363974 AGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTT 364033 | || || || | | | |||||||| | ||||| || | |||||||| | | Sbjct 333332 AACGTGTAGACACTGATTCTGTCTGGTCACTGATGTGCCCTCATAAGTGTCCAGGATTAT 333391 Query 364034 CCGA-TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092 | || ||| ||||| || || | | || || ||||| || ||| | || || || Sbjct 333392 CGGACTGT-TGGGGCGAAGAGTTCGAAAAACTCTATGAAAAATACGAAGCCGAAGGTAAA 333450 Query 364093 GCTCGTAAGACA-ATTCCCGC-ACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTG 364150 | ||| ||| || || || | ||||| | ||| || || | ||||| |||| Sbjct 333451 TATAATAA-ACAGATACCGGCTAGAGAAG-TTTGGCGCGCAATTGTTATCTCGCAAATTG 333508 Query 364151 AGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGC 364210 || || || |||||| ||||||| ||| | |||||| ||| ||||| ||| Sbjct 333509 AGGTTGGTGTTCCTTATATGCTGTACAAGGATGCCTGCAACTCAAAGAGTAACCAACAGA 333568 Query 364211 ACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTC 364267 | | || |||| ||| ||||| ||||| || || || || || ||||| || || | Sbjct 333569 ATTTGGGCACAA-TCA--AGAGCTCGAACCTGTGCACAGAAATAATGGAATATACTGCGC 333625 Query 364268 CCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA---AG 364324 ||||||| |||||||| ||||| | || || || || || ||||||||| || Sbjct 333626 CCGACGAAACTGCCGTCTGTAATTTGGCATCCATTGCCGTTAATATGTTTGTAAAACCAG 333685 Query 364325 ATGGTACTTTTGACCACCAGCATCTT-TATGACGTAACCTATCATGCTACTTGCAATCTC 364383 || | || || || || || | || | ||| | | | |||| | ||||| Sbjct 333686 ATAAATCATTCGA-TTTCATCAAATTAAAGGAACTTACCAAACTAGTTACTAGAAATCTG 333744 Query 364384 GACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGT 364443 ||||| | ||||||| || |||||||| | |||||||| || |||||| | Sbjct 333745 AACAAGATCATCGACATCAACTATTATCCTGTACCTGAAGCTAGAAACTCAAATATGAGA 333804 Query 364444 CATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTAT 364490 ||||| || |||||| ||||| ||||||| | || || | |||||| Sbjct 333805 CATCGTCCAATTGGTATTGGTATACAGGGATTGGCCGATGCTTTTAT 333851 >seq3863 Length=89242 Score = 91.5 bits (100), Expect = 4e-13 Identities = 98/127 (77%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 12825 TGATCCAAATGTCAGAGAATCCATGTCTTCAGTTGCTGTGGCATACGCTTTTCCTGTTTT 12884 ||||||||| || | || |||||| || ||||||||||| || || ||||||| | || Sbjct 21865 TGATCCAAAAGTTAAAGCATCCATATCCTCAGTTGCTGTTCCAAACACTTTTCCAGACTT 21806 Query 12885 TAC-ATATGCAGCACATGTAGCTTCGGCCTCACATGGTGCTTGAACGACCGGAATGCCCA 12943 || ||| |||||||| |||||| || ||||||||||||| || || || | |||| Sbjct 21805 GACCATA-GCAGCACACTGAGCTTCTGCTTCACATGGTGCTTCAATGAATGGTACTCCCA 21747 Query 12944 TTAGGGT 12950 ||| ||| Sbjct 21746 TTAAGGT 21740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303275948636300