Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq830 95.1 9e-15 >seq830 Length=194395 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || ||||||| || || || ||||| |||||| ||||| ||| | | Sbjct 124453 ATGCAGATCTTCGTTAAAACCTTGACTGGAAAAACTATTACCTTGGAAGTTGAACCATCT 124394 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | ||| ||||| || || || || | ||| | | || Sbjct 124393 GACACAATTGAAAACGTAAAGGCCAAAATCCAAGACAAGGAAGGAATTCCTCCAGATCAG 124334 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | | ||||||||||| |||||| | |||||| | ||| || |||| ||||| Sbjct 124333 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCCGACTACAAC 124274 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||||||||||||||| ||| | ||||| ||| | || ||||| Sbjct 124273 ATCCAGAAGGAATCTACTCTCCATTTAGTATTGCGTCTTCGTGGAGG 124227 Score = 86.0 bits (94), Expect = 4e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 21963 ATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAG 22022 || ||||||||||| ||| | |||||| | |||| || | || ||||| || |||||| Sbjct 122710 ATTTTTGCTGGCAAGCAATTGGAAGATGGCAGAACTCTGTCTGACTACAACATCCAGAAG 122651 Query 22023 GAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAA 22067 ||||| || ||||| |||| |||||||| || |||||| | ||| Sbjct 122650 GAATCAACCCTTCACTTGGTTTTACGTTTGCGTGGAGGACAGTAA 122606 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 21963 ATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAG 22022 ||||| || || |||||| | |||||| | ||| || | ||||||||||| |||||| Sbjct 123622 ATCTTCGCCGGTAAACAATTGGAAGATGGCAGGACTCTGTCTGATTACAATATCCAGAAG 123563 Query 22023 GAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| ||||| ||| ||||||| ||| | || ||||| Sbjct 123562 GAATCCACTCTCCATTTGGTATTGCGTCTTCGTGGAGG 123525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358104504396100