Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq830 131 1e-25 seq429 98.7 8e-16 >seq830 Length=194395 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | ||| |||||||| | |||||||| || || |||||||| ||| Sbjct 124224 ATACCTCCACGAAGACGCAATACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCG 124283 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | |||||| | |||||||||||| |||| | ||| || || || ||| Sbjct 124284 GACAGAGTCCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGCTGATCTGGA 124343 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| || || |||| | ||||| ||||| | | ||| Sbjct 124344 GGAATTCCTTCCTTGTCTTGGATTTTGGCCTTTACGTTTTCAATTGTGTCAGATGGTTCA 124403 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| || |||| ||||| || || |||||||| Sbjct 124404 ACTTCCAAGGTAATAGTTTTTCCAGTCAAGGTTTTAACGAAGATCTGCAT 124453 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | ||| |||||||| | |||||||| ||||| |||||||| || Sbjct 124680 ATACCTCCACGAAGACGCAATACTAAATGAAGTGTAGATTCCTTTTGGATGTTGTAGTCC 124739 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | |||||| | ||||||||||||| |||| | ||| || || || || Sbjct 124740 GACAGAGTCCTGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGT 124799 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || |||||||| |||||| || | | ||||| ||| || | || || Sbjct 124800 GGGATTCCCTCTTTGTCTTGAATCTTAGCCTTCACATTTTCAATGGTATCAGAGGGCTCA 124859 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || | ||||| ||||| |||||||| Sbjct 124860 ACCTCCAAAGTGATGGTTTTACCAGTTAAGGTTTTCACAAAGATCTGCAT 124909 Score = 122 bits (134), Expect = 7e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || ||||| || || | |||||| ||||||| |||||||| ||||| || |||||||| Sbjct 123066 ATTCCGCCTCGAAGACGCAAAACCAAATGTAATGTAGATTCCTTTTGGATATTGTAATCA 123125 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | ||| || | |||||||| ||| |||| | ||| || || || ||| Sbjct 123126 GACAAGGTCCTGCCATCCTCCAACTGTTTACCTGCGAAGATCAAACGTTGCTGATCTGGA 123185 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTC 114331 ||||| ||||| ||||| ||| ||| | ||| | | |||| || |||| | ||| Sbjct 123186 GGAATACCTTCCTTGTCTTGAAT-TTTGGCCTTAACGTTCTCAATTGTATCGGATGGTTC 123244 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | ||||| || |||| |||||||||||||| ||||| Sbjct 123245 AACTTCTAAGGTGATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 123295 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | ||| || ||||| | || ||||| |||||||||||||| || Sbjct 124452 ATACCACCGCGAAGACGCAATACCAAATGAAGGGTGGATTCCTTTTGAATGTTGTAGTCC 124511 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | |||||| | ||| ||||||||| |||| | ||| ||||| || || Sbjct 124512 GACAGAGTCCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGT 124571 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| || || ||| | | ||||| ||||| | | ||| Sbjct 124572 GGGATTCCTTCCTTGTCTTGGATTTTGGCTTTGACATTTTCAATTGTGTCAGATGGTTCA 124631 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| || |||| ||||| ||||| |||||||| Sbjct 124632 ACTTCCAAGGTAATGGTTTTTCCAGTCAAGGTTTTAACAAAGATCTGCAT 124681 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | ||| || ||||| | |||||||| ||||| |||||||| || Sbjct 123996 ATACCACCACGAAGACGCAATACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCT 124055 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | |||||| | ||||||||||||| |||| | ||| || || || ||| Sbjct 124056 GACAGAGTCCTGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCTGGA 124115 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| || || || | | ||||| ||||| | | ||| Sbjct 124116 GGGATTCCTTCCTTGTCTTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGATGGTTCA 124175 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || |||| ||||| || || |||||||| Sbjct 124176 ACTTCCAAAGTAATGGTTTTTCCAGTCAATGTTTTAACGAAGATCTGCAT 124225 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || |||| ||| | || || || || |||||||| ||||| Sbjct 122838 ATACCACCACGCAGACGTAACACTAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCC 122897 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | | ||| || | ||| ||||| || | || | ||| || ||||| ||| Sbjct 122898 GACAAAGTTCTACCATCCTCCAATTGCTTACCCGCAAAAATCAAACGTTGCTGGTCTGGA 122957 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| ||| || |||| | |||| ||||| | | || Sbjct 122958 GGAATACCTTCTTTGTCTTGAATTTTAGCCTTTACGTTCTCAATTGTGTCCGATGGCTCC 123017 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || |||| |||||| || ||||||||||| Sbjct 123018 ACCTCCAAAGTGATAGTCTTTCCCGTCAAAGTTTTCACGAAAATCTGCAT 123067 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | |||||| ||||| | || ||||| || || |||||||| || Sbjct 123294 ATACCTCCACGAAGACGCAAAACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCA 123353 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | |||||| | |||||||| || | || | ||| || || || || Sbjct 123354 GACAGAGTCCTGCCATCTTCCAACTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGG 123413 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| |||||| || | | ||||| ||||| | | || Sbjct 123414 GGGATCCCTTCCTTGTCTTGAATCTTAGCCTTGACATTTTCAATAGTGTCAGAAGGCTCA 123473 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || | ||||| |||||||||||||| Sbjct 123474 ACCTCCAAAGTGATGGTTTTACCAGTTAAGGTTTTCACAAAAATCTGCAT 123523 >seq429 Length=41586 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || |||||||| || || |||||| ||| || ||||| ||||| Sbjct 1140 GTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTACGTCCATCCTCGAGTTGCTTACCG 1199 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| ||||| || || || || ||||| || || ||||| ||||| || Sbjct 1200 GCGAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTC 1259 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||| |||| | ||||| || | ||| | || || || |||| |||| Sbjct 1260 ACATTCTCGATGGTATCGGAAGGCTCGACCTCAAGGGTGATGGTCTTACCCGTCAAAGTT 1319 Query 114366 TTTACAAAAATCTGCAT 114382 ||||| ||||||||||| Sbjct 1320 TTTACGAAAATCTGCAT 1336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420110590195800