Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4450 253 4e-62 >seq4450 Length=177458 Score = 253 bits (280), Expect = 4e-62 Identities = 498/728 (68%), Gaps = 15/728 (2%) Strand=Plus/Minus Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 |||| || || || |||||||| || || |||||||| ||||||| || |||| | Sbjct 24742 TGGCATTTTTTGCTGCCTCTGATGGTATTGTCAATGAAAACCTGGTAGAGAGATTCAGTA 24683 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 |||| || || ||||||| | |||||| ||| | ||||| ||||| |||||| Sbjct 24682 AAGAAGTACAAGTTATTGAGGCAAAATTCTTCTATGGCATGCAGATTGCCATGGAGAACA 24623 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC-GT 42602 | ||||| | ||||| || | |||| || ||| ||| || || | Sbjct 24622 TACACTCACTGATGTACAGTTTGTTGATAGACACTTATATCAAAGAT---GTGAAGGAGA 24566 Query 42603 AACGGGCTGTTC--AAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660 || | | ||| || || || || || || || ||| | || |||||||| || |||| Sbjct 24565 AAAGTTTTCTTCTTAATGCAATTGAAACTATTCCATGCGTGAAAAAGAAGGCTGATTGGG 24506 Query 42661 CGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720 || | || ||||| |||| || || || ||||| || ||| | || || ||| | | Sbjct 24505 CGTTAAATTGGATTTCCAGTCAAGAAGCGACATTCGGTGAAAGGGTCGTCGCTTTTGCAG 24446 Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGG 42780 | || ||||| || |||||||| ||| |||||||| ||||||||||| ||| |||| | Sbjct 24445 CAGTGGAGGGTATTTTCTTCTCCGGCAGTTTCGCCTCGATCTTCTGGCTGAAGAAGAAAG 24386 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 | ||||||||| ||||| ||||| ||||| | ||| |||||| || | | |||| Sbjct 24385 GATTGATGCCCGGTCTCACTTTCTCCAACGAGTTGATCTCCAGGGATGAAGCGATGCACT 24326 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGG 42900 | | || || || | |||| | ||| || ||| ||||| || ||||| ||| Sbjct 24325 GCAAATTCGCGTGTTTGATGTT---TAAGCACGTCGTGCAGAAGCCTTCAGAGGAGAGGG 24269 Query 42901 TCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGC 42960 || | |||||||| || |||||| ||||||| ||||||| || || | | |||| Sbjct 24268 TCAAGAACATCATCAGAGATGCCGTGAAGATCGAACAGGAGTTTCTTACCGAAGCCCTGC 24209 Query 42961 CCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCG 43020 | || || || |||||||||| || || ||||| | |||||| | | ||| || | Sbjct 24208 CTGTATCTTTGATCGGCATGAATTGCGGACTTATGTGTGAATACATCGAATTCGTGGCTG 24149 Query 43021 ACCATCTCCTGTGCCAGA--TGGGTCTCAGCCG-CCTCTACAACACGCCGTGCCCCTTCG 43077 || | || | || |||| |||| || || | ||||| || ||| |||||| Sbjct 24148 ACAAGCTGC--TGGCAGATTTGGGAATC-GCTGAAATCTACCACTCGCGAAATCCCTTCA 24092 Query 43078 ACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCG 43137 | |||||||| ||||| ||| | || || || ||||| || ||||| ||| || | | Sbjct 24091 ATTTTATGGATAACATATCGATAGACGGAAAAACCAATTTCTTCGAAAAGAAAGTTGGAG 24032 Query 43138 ACTACCAG 43145 | |||||| Sbjct 24031 AATACCAG 24024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944284310284000