Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq4382 91.5 1e-13 >seq4382 Length=40876 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 108840 CAAGAACATTTTCCCAAGAGAAAACAAATTGGTGGCGGCGTTGGCTCTCGGCGAGGGATG 108899 || ||||||| || | ||||||||| || || || || | ||| ||||||||||||| Sbjct 30107 CAGGAACATTGGACCTACAGAAAACAAGTTCGTTGCTGCAATTGCTTTCGGCGAGGGATG 30048 Query 108900 GCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTGGGGAACGACTT 108959 |||||||||||||||| | ||||| | || ||||| || | ||| | || || | | Sbjct 30047 GCACAACTACCACCACATCTTCCCGTGGGATTACAAAGCGTCTGAGCTCGGCTACAAACT 29988 Query 108960 TAATTTCACCGCTAGGATATTGGACTTTGCCGCGTCGAGAGGATGGGTCTACGACCTTCG 109019 || | ||| | || || | ||||| ||| | || ||||||| ||||| || Sbjct 29987 CAACGTTACCACCAGCATCATCGACTTCTTCGCCTGGATGGGATGGGCTTACGATCT--C 29930 Query 109020 ACAAC--CCTCGCGACAGCTGATCGAGA 109045 | ||| |||||| | ||||||||| Sbjct 29929 AAAACGGTCTCGCGTGATATGATCGAGA 29902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381751164219600