Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1636 158 1e-33 seq830 111 2e-19 seq429 102 8e-17 seq1314 95.1 1e-14 >seq1636 Length=121147 Score = 158 bits (174), Expect = 1e-33 Identities = 237/336 (71%), Gaps = 3/336 (1%) Strand=Plus/Plus Query 57112 ATGCCGATGATGCCGCAGCCGAGACGGCCGCCCGAGTTGCCGGTGGTCTTGCTCAGCGGA 57171 |||||||||| |||||| ||||||| |||| | ||| || ||||||||||| || Sbjct 2791 ATGCCGATGACGCCGCAAGCGAGACGAGCGCCGGCGTTTCCTGTGGTCTTGCTGAGTTCG 2850 Query 57172 TGTTCGGTGAGGCCGAGATCGTCGCGCTTCGCGTGAACCACCAGACTGCGGCCGACGACG 57231 ||| || || | |||||| | | ||||| || || || |||| || | || | Sbjct 2851 TGTCCGCCCGCTCCCATGTCGTCGGGATCGGCGTGGACGACGAGGGTGCGTCCCAGGATG 2910 Query 57232 CTATTTTCGCCGAAAAGCGTCATCACGTTGTCGATCTTGTCCACTTCGGTGAGGGCGTTG 57291 || || | |||||| | || ||| | |||||| || ||| || || | ||||| Sbjct 2911 CTGTTGTTGCCGAACAACGAGATCTCCTTGTCGGAGATGGACACCATGGCGACGCCGTTG 2970 Query 57292 GACACTTTGGCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCG 57351 | |||||| |||||||||| ||| |||||||| || ||| | | | ||||| || Sbjct 2971 CTACC---GGCCTCTACGTTGCCCAGGTCACCGACGTGACGTACGTCGGAGGTGGGACCG 3027 Query 57352 CCGTGTTCGCTGCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTG 57411 ||||| || |||| || || ||||| || ||||| |||| |||||| || || Sbjct 3028 CCGTGATCCTTGCCCTGCGGATTGAAGTGGGGCCCGGCCGAGATGCAACCGTTGGTGTTG 3087 Query 57412 TCGCCGAACTCGTGAACGTGAAATCCGTGCAGGCCC 57447 || ||||||||||| | ||| |||||||| |||||| Sbjct 3088 TCACCGAACTCGTGGATGTGGAATCCGTGGAGGCCC 3123 >seq830 Length=194395 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| || |||| ||| | | | |||||||| |||||||| || || | Sbjct 122841 CCACCACGCAGACGTAACACTAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCCGAC 122900 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||||| | ||| ||||| | | | || | ||| || ||||| ||||| Sbjct 122901 AAAGTTCTACCATCCTCCAATTGCTTACCCGCAAAAATCAAACGTTGCTGGTCTGGAGGA 122960 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| |||| | |||| | || | ||||| | | |||||| Sbjct 122961 ATACCTTCTTTGTC-TTGAATTTTAGCCTTTACGTTCTCAATTGTGTCCGATGGCTCCAC 123019 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || |||| |||||| || ||||||||||| Sbjct 123020 CTCCAAAGTGATAGTCTTTCCCGTCAAAGTTTTCACGAAAATCTGCAT 123067 Score = 105 bits (116), Expect = 7e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 |||||||| | ||||||||| ||||||| | || |||||||| || ||||| || | Sbjct 123069 CCGCCTCGAAGACGCAAAACCAAATGTAATGTAGATTCCTTTTGGATATTGTAATCAGAC 123128 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | || | ||||| | |||||||| | |||| | ||| || || || ||||| Sbjct 123129 AAGGTCCTGCCA-TCCTCCAACTGTTTACCTGCGAAGATCAAACGTTGCTGATCTGGAGG 123187 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| |||| | |||| | || | || |||| | || | Sbjct 123188 AATACCTTCCTTGTCT-TGAATTTTGGCCTTAACGTTCTCAATTGTATCGGATGGTTCAA 123246 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | ||||| ||||||| |||||||||||||| ||||| Sbjct 123247 CTTCTAAGGTGATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 123295 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| |||||||| | | || ||||| || |||||||||||| | Sbjct 124227 CCTCCACGAAGACGCAATACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAC 124286 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || || | ||||||||| | | |||| | ||| || || || ||||| Sbjct 124287 AGAGTCCTGCCA-TCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGCTGATCTGGAGG 124345 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| |||||| |||| | ||| | ||||| | | || || Sbjct 124346 AATTCCTTCCTTGTCTTGGATTTTGGCCTTTACGTTTTCAATTGTGTCAGATGGTTCAAC 124405 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||||| ||||| || || |||||||| Sbjct 124406 TTCCAAGGTAATAGTTTTTCCAGTCAAGGTTTTAACGAAGATCTGCAT 124453 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || ||||| | | | || |||||||||||||||||||| | Sbjct 124455 CCACCGCGAAGACGCAATACCAAATGAAGGGTGGATTCCTTTTGAATGTTGTAGTCCGAC 124514 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || || | ||| ||||| | |||| | ||| ||||| || || || Sbjct 124515 AGAGTCCTGCCA-TCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGG 124573 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| |||||| ||| | | ||| | ||||| | | || || Sbjct 124574 GATTCCTTCCTTGTCTTGGATTTTGGCTTTGACATTTTCAATTGTGTCAGATGGTTCAAC 124633 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||||| ||||| ||||| |||||||| Sbjct 124634 TTCCAAGGTAATGGTTTTTCCAGTCAAGGTTTTAACAAAGATCTGCAT 124681 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||||||| ||||| | | || ||||| || ||||||||||| | Sbjct 123297 CCTCCACGAAGACGCAAAACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 123356 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || || | |||||||||| | | || | ||| || || || || || Sbjct 123357 AGAGTCCTGCCA-TCTTCCAACTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGGGG 123415 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || | || | | ||| | ||||| | | ||| | Sbjct 123416 GATCCCTTCCTTGTC-TTGAATCTTAGCCTTGACATTTTCAATAGTGTCAGAAGGCTCAA 123474 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | ||||||||||| | ||||| |||||||||||||| Sbjct 123475 CCTCCAAAGTGATGGTTTTACCAGTTAAGGTTTTCACAAAAATCTGCAT 123523 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| |||||||| | | || |||||||| ||||||||||| | Sbjct 124683 CCTCCACGAAGACGCAATACTAAATGAAGTGTAGATTCCTTTTGGATGTTGTAGTCCGAC 124742 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || || | ||||||||| | |||| | ||| || || || || || Sbjct 124743 AGAGTCCTGCCA-TCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGTGG 124801 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || |||||||| ||| | || | || | | ||| | ||| || | | ||| | Sbjct 124802 GATTCCCTCTTTGTC-TTGAATCTTAGCCTTCACATTTTCAATGGTATCAGAGGGCTCAA 124860 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | ||||||||||| | ||||| ||||| |||||||| Sbjct 124861 CCTCCAAAGTGATGGTTTTACCAGTTAAGGTTTTCACAAAGATCTGCAT 124909 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||||||| ||||| || || | | |||| ||||| || ||||||||||| | Sbjct 122613 CCTCCACGCAAACGTAAAACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCAGAC 122672 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || || | ||| || || | | | || | |||||| || || || || Sbjct 122673 AGAGTTCTGCCA-TCTTCCAATTGCTTGCCAGCAAAAATCAAACGCTGCTGATCTGGTGG 122731 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| || || |||||| ||| | | || | || || | || ||||| Sbjct 122732 AATTCCTTCCTTATCCTGGATTTTGGCTTTAACGTTCTCGATTGTATCAGACGGTTCCAC 122791 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || |||| ||||||||| || |||||||| Sbjct 122792 CTCCAAAGTGATAGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 122839 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || ||||| | | | || |||||||| ||||||||||| | Sbjct 123999 CCACCACGAAGACGCAATACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGAC 124058 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || || | ||||||||| | |||| | ||| || || || ||||| Sbjct 124059 AGAGTCCTGCCA-TCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCTGGAGG 124117 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| |||||| || | | ||| | ||||| | | || || Sbjct 124118 GATTCCTTCCTTGTCTTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAAC 124177 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||||| ||||| || || |||||||| Sbjct 124178 TTCCAAAGTAATGGTTTTTCCAGTCAATGTTTTAACGAAGATCTGCAT 124225 >seq429 Length=41586 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || ||||||||||| || |||||| ||||||||||| ||||||| Sbjct 1143 GATTCCTTCTGGATGTTGTAGTCCGACAGAGTACGTCCATCCTCGAGTTGCTTACCGGCG 1202 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||| || || || || || || || || ||||| ||| || || | Sbjct 1203 AAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTCACA 1262 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||| |||| | ||| ||||| | || | || ||||| |||| ||||||| Sbjct 1263 TTCTCGATGGTATCGGAAGGCTCGACCTCAAGGGTGATGGTCTTACCCGTCAAAGTTTTT 1322 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 1323 ACGAAAATCTGCAT 1336 >seq1314 Length=49468 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | | |||||||| || |||||||||||| Sbjct 22008 CCACCACGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 22067 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| || ||||||| |||| | ||| || || || || || Sbjct 22068 AGGGTGCGTCCATCCTCGAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCTGGGGGG 22127 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || |||||||| ||| || || | | ||| | || |||| | ||| ||| Sbjct 22128 ATTCCCTCTTTGTCCTGGATCTTGGCCTTCACATTTTCGATAGTATCGGAGGGCTCGACC 22187 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || ||||| || || ||||| || ||||| ||||| Sbjct 22188 TCGAGGGTGATGGTCTTACCCGTTAGGGTTTTCACGAAAATTTGCAT 22234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496233554748000