Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq830 152 2e-31 seq1459 118 4e-21 seq1217 116 1e-20 seq809 89.7 2e-12 >seq830 Length=194395 Score = 152 bits (168), Expect = 2e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||||||||| ||||||| |||||||| ||| | || |||||| |||| Sbjct 123751 ATGCAGATCTTCGTTAAAACCTTGACTGGAAAAACTATCACTTTGGAAGTTGAACCATCC 123692 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | || ||||| ||||| ||||||||||| || || ||||| Sbjct 123691 GATACAATTGAAAACGTCAAGGCTAAAATCCAAGACAAGGAAGGAATCCCCCCAGATCAG 123632 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||||||||| ||| | || |||||| | |||||||| || ||| || | ||||| ||| Sbjct 123631 CAACGTTTAATCTTCGCCGGTAAACAATTGGAAGATGGCAGGACTCTGTCTGATTACAAT 123572 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| | || || || || ||||| Sbjct 123571 ATCCAGAAGGAATCCACTCTCCATTTGGTATT 123540 Score = 152 bits (168), Expect = 2e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||||||| ||||||| ||||| |||||| | || |||||| ||||| Sbjct 124225 ATGCAGATCTTCGTTAAAACATTGACTGGAAAAACCATTACTTTGGAAGTTGAACCATCT 124166 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || ||||| ||||| ||||||||||| ||||| ||||| Sbjct 124165 GACACAATTGAAAACGTCAAGGCCAAAATCCAAGACAAGGAAGGAATCCCTCCAGATCAG 124106 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || ||| | || |||||| | |||||||| || ||| || | || || || Sbjct 124105 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCAGACTACAAC 124046 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| | || ||||| || ||||| Sbjct 124045 ATCCAAAAGGAATCTACCCTTCATTTGGTATT 124014 Score = 152 bits (168), Expect = 2e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || |||||||| ||||||| ||||| ||||| | || |||||| ||||| Sbjct 124681 ATGCAGATCTTTGTTAAAACCTTGACTGGAAAAACCATTACCTTGGAAGTTGAACCATCT 124622 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | ||| ||||| ||||| ||||||||||| || || |||||| Sbjct 124621 GACACAATTGAAAATGTCAAAGCCAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAA 124562 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || ||| | || || ||| | |||||||| || ||| || |||| || || Sbjct 124561 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGGACTCTGTCGGACTACAAC 124502 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 ||| | ||||| | || ||||| || ||||| Sbjct 124501 ATTCAAAAGGAATCCACCCTTCATTTGGTATT 124470 Score = 149 bits (164), Expect = 2e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||||||||| ||||||| ||||||||||| | || |||||| ||||| Sbjct 124453 ATGCAGATCTTCGTTAAAACCTTGACTGGAAAAACTATTACCTTGGAAGTTGAACCATCT 124394 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || ||||| ||||| ||||||||||||||||| ||||| Sbjct 124393 GACACAATTGAAAACGTAAAGGCCAAAATCCAAGACAAGGAAGGAATTCCTCCAGATCAG 124334 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || | || |||||| | |||||||| || ||| || | || || || Sbjct 124333 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCCGACTACAAC 124274 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| | || || || |||||||| Sbjct 124273 ATCCAGAAGGAATCTACTCTCCATTTAGTATT 124242 Score = 143 bits (158), Expect = 1e-28 Identities = 141/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||||||| ||||||| ||||| || ||| | || |||||| |||| Sbjct 123997 ATGCAGATCTTCGTTAAAACATTGACTGGAAAAACCATCACTTTAGAAGTTGAACCATCC 123938 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| |||| ||||| ||||| ||||||||||| || || ||||| Sbjct 123937 GATACAATTGAGAACGTTAAGGCCAAAATCCAAGACAAGGAAGGAATCCCCCCAGATCAG 123878 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||||||||| ||| | || |||||| | |||||||| || ||| || | ||||| ||| Sbjct 123877 CAACGTTTAATCTTCGCCGGAAAACAATTGGAAGATGGCAGGACTCTGTCTGATTACAAT 123818 Query 391230 AT 391231 || Sbjct 123817 AT 123816 Score = 143 bits (158), Expect = 1e-28 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| | ||||||||||| || ||| | || ||||| | ||| Sbjct 124909 ATGCAGATCTTTGTGAAAACCTTAACTGGTAAAACCATCACTTTGGAGGTTGAGCCCTCT 124850 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||||| | | || || |||||||| || || ||||| || |||||||| Sbjct 124849 GATACCATTGAAAATGTGAAGGCTAAGATTCAAGACAAAGAGGGAATCCCACCTGATCAG 124790 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || ||| | || |||||| | |||||||| || ||| || |||| || || Sbjct 124789 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCGGACTACAAC 124730 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| | |||||||| |||||||| Sbjct 124729 ATCCAAAAGGAATCTACACTTCATTTAGTATT 124698 Score = 134 bits (148), Expect = 5e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| ||||||| ||||| || || | || |||||| |||| Sbjct 123295 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATCACCTTAGAAGTTGAACCATCC 123236 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| |||| ||||||||||| |||||||| |||||||| ||||| Sbjct 123235 GATACAATTGAGAACGTTAAGGCCAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAG 123176 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || ||| |||| ||||| | || ||||| || || ||| | ||||| ||| Sbjct 123175 CAACGTTTGATCTTCGCAGGTAAACAGTTGGAGGATGGCAGGACCTTGTCTGATTACAAT 123116 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| | ||| | || || || || Sbjct 123115 ATCCAAAAGGAATCTACATTACATTTGGTTTT 123084 Score = 132 bits (146), Expect = 2e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| |||| || || ||||| ||| | || || ||| | ||| Sbjct 122839 ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACTATCACTTTGGAGGTGGAACCGTCT 122780 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || ||||| ||||| || ||||||||||||||||| || ||||| Sbjct 122779 GATACAATCGAGAACGTTAAAGCCAAAATCCAGGATAAGGAAGGAATTCCACCAGATCAG 122720 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| ||||| | || || ||| | |||||||| |||||| || | || || || Sbjct 122719 CAGCGTTTGATTTTTGCTGGCAAGCAATTGGAAGATGGCAGAACTCTGTCTGACTACAAC 122660 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTA 391262 || | ||||| |||| |||||||| || ||| Sbjct 122659 ATCCAGAAGGAATCAACCCTTCACTTGGTTTTA 122627 Score = 131 bits (144), Expect = 7e-25 Identities = 161/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| |||| || || ||||| ||| | || || || |||| Sbjct 123068 AATGCAGATTTTCGTGAAAACTTTGACGGGAAAGACTATCACTTTGGAGGTGGAGCCATC 123009 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | || ||||||||||| || ||||| |||||||| || || Sbjct 123008 GGACACAATTGAGAACGTAAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGACCA 122949 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||||| ||||| | || || ||| | || ||||| ||||||||| |||||||||| Sbjct 122948 GCAACGTTTGATTTTTGCGGGTAAGCAATTGGAGGATGGTAGAACTTTGTCGGATTATAA 122889 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTG 391268 ||| | ||||| | || || || |||| ||| | ||| Sbjct 122888 CATTCAGAAGGAGTCCACCCTCCATCTAGTGTTACGTCTG 122849 Score = 113 bits (124), Expect = 2e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| | ||||||||||| || ||| | || ||||| | ||| Sbjct 123523 ATGCAGATTTTTGTGAAAACCTTAACTGGTAAAACCATCACTTTGGAGGTTGAGCCTTCT 123464 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | || || |||||||| |||||||| || || || ||||| Sbjct 123463 GACACTATTGAAAATGTCAAGGCTAAGATTCAAGACAAGGAAGGGATCCCCCCAGATCAG 123404 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| ||||| | || ||||| | |||||||| || ||| || | || || || Sbjct 123403 CAACGTTTGATTTTTGCCGGTAAACAGTTGGAAGATGGCAGGACTCTGTCTGACTACAAC 123344 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| | || || || || || || Sbjct 123343 ATCCAGAAGGAATCCACTCTCCATTTGGTTTT 123312 >seq1459 Length=118203 Score = 118 bits (130), Expect = 4e-21 Identities = 280/420 (67%), Gaps = 6/420 (1%) Strand=Plus/Minus Query 451190 AAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAA 451249 || |||||||| | ||||| || | | | ||||| | || || || ||||||||| Sbjct 103529 AAGGGAAAGCCGAAAATTCAGGTGGAGTTTCGGGGTGAGAAGAAGACGTTCGCTCCTGAA 103470 Query 451250 GAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCT 451309 || || || |||||||| || || || |||| || || || || || | || Sbjct 103469 GAGATCTCGTCTATGGTGCTGACGAAGATGAGGGAGACGGCGGAGGCTTACCTGGGGGAG 103410 Query 451310 CCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCA 451369 | || | ||||| || || || || |||||||| ||||| ||| | || ||||| || Sbjct 103409 GCTGTGAGGGATGCGGTGATCACGGTGCCCGCTTACTTCAACGATTCGCAGCGGCAGGCG 103350 Query 451370 ACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACA 451429 || || ||||| || ||||| || | || || || | || || || ||||| || Sbjct 103349 ACGAAGGATGCGGGGATGATTGCCGGCATCAACGTGCTCAGGATCATCAACGAACCGACG 103290 Query 451430 GCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTA 451489 || || |||||||| || || || ||| || | ||| || || | ||| | | Sbjct 103289 GCCGCGGCTCTAGCGTACGGCCT-GGACAAGAATCTGAA--AGGTGAGAGAAACGTGCTC 103233 Query 451490 GTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---G 451546 | |||||||| ||||| || ||| || || ||||| | || || || || | Sbjct 103232 ATCTTTGATTTGGGTGGTGGCACTTTCGACGTATCCGTACTCACCATAGACGAGGGTTCG 103173 Query 451547 GTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 | || || || || || || ||||| || ||||||||||| |||||| | |||||| Sbjct 103172 CTGTTCGAGGTGAAAGCGACTGCCGGTGACACCCATCTAGGAGGCGAAGATTTCGATAAT 103113 >seq1217 Length=60648 Score = 116 bits (128), Expect = 1e-20 Identities = 247/366 (67%), Gaps = 6/366 (2%) Strand=Plus/Plus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 ||||| || || ||||| || |||||||| | || ||||| ||||| || ||| Sbjct 20078 TTTGCCCCCGAGGAAATCTCCGCTATGGTTTTGGGCAAGATGAAGGAAACCGCTGAAGCC 20137 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 ||| | || || ||| | || || | ||||| |||||||| ||||| ||||| Sbjct 20138 TATTTGGGCAAGAAGGTCACTCACGCCGTCGTCACTGTACCCGCTTACTTCAACGATGCT 20197 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 ||||| ||||| || || ||||| || || || ||||| || || | | || || Sbjct 20198 CAACGTCAAGCCACCAAGGATGCTGGTGTCATCGCCGGTTTGAACGTGATGAGGATCATC 20257 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaa 451477 || ||||| || || |||||| | || || || || ||| || ||| | | ||| Sbjct 20258 AACGAACCCACCGCCGCTGCTATTGCTTACGG-CTTGGACAAG---AAGGAC--GGCGAA 20311 Query 451478 aaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATT 451537 || || |||| ||||| ||||| || || || || ||| || | || | || Sbjct 20312 AAGAACGTTTTGGTATTCGATTTGGGCGGCGGTACCTTCGATGTGTCCCTCCTCACCATC 20371 Query 451538 GAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 || |||| || || |||||| || ||||| || || || ||| | |||||||||||| Sbjct 20372 GACAATGGAGTCTTCGAAGTAGTAGCCACCAACGGAGACACCCATTTGGGAGGTGAAGAT 20431 Query 451598 ATTGAT 451603 | ||| Sbjct 20432 TTCGAT 20437 >seq809 Length=60095 Score = 89.7 bits (98), Expect = 2e-12 Identities = 202/299 (68%), Gaps = 10/299 (3%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||| || || || || |||||||| || || ||||| || | ||| |||| || || Sbjct 8209 GTTAAGGACGCTGTGATCACTGTTCCGGCGTACTTCAACGACTCCCAAAGGCAGGCCACC 8150 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| ||||| || | || || | | || || || ||||| || || Sbjct 8149 AAAGATGCTGGAGCCATTGCCGGACTCAACGTCTTGAGGATCATCAACGAACCAACCGCT 8090 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 || ||| | || || || | ||| || | |||| | || || || |||| | Sbjct 8089 GCAGCTTTGGCTTACGGTTT-GGATAAGAACTTGAAA--GGCGAGAAGAACGTTTTGATC 8033 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTT--CAATTGAAGATGGGG--- 451547 || ||||| || || |||||| ||| ||| | ||| |||| || || || Sbjct 8032 TTCGATTTGGGCGGTGGAACTTTCGATG--TCTCGATTTTAACAATCGATGAAGGATCTC 7975 Query 451548 TATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 | |||||||| ||| |||| |||||||||||| | ||||| |||||| | |||||| Sbjct 7974 TTTTTGAAGTCAAGTCAACTGCTGGTGATACTCACTTGGGAGGAGAAGATTTCGATAAT 7916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975600690402200