Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq809 228 6e-54 seq4008 201 9e-46 seq3455 118 8e-21 seq1217 109 4e-18 seq435 86.0 5e-11 >seq809 Length=60095 Score = 228 bits (252), Expect = 6e-54 Identities = 703/1063 (66%), Gaps = 37/1063 (3%) Strand=Plus/Plus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 || ||||| || || || || |||| ||| || || ||||| |||| ||||| |||||| Sbjct 7158 ACGTTAAGGATGCCGTTAGCGTCCAGATCGAAAGTAACTTCGATTTTCGGGACTCCTCTC 7217 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384 | || || || || || ||| || || ||||||| || || |||||||| | Sbjct 7218 GGTGCTGGCGGAATTCCGCACAAGTTGAAGGTTCCCAAGAGGTTGTTGTCTTTAGTCATC 7277 Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 517444 | ||| || ||||| | |||||| ||||| ||| ||||||||| || |||||||| Sbjct 7278 GCCCTTTCGCCTTCGAAGACTTGGATGGTAACCGCAGATTGATTATCGGAGTAAGTTGTG 7337 Query 517445 AATACTCTGGATTTT--TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAA 517502 || | | | | | || |||||||| | | ||| || |||| || |||||||||| Sbjct 7338 AA--CGTTTGTTGCTGCTTGCAAGGAATCCTCGAGTTCCTCTCAACGATTTTGGTCATAA 7395 Query 517503 TACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTT 517562 || || || ||||| | ||| | ||||||||||| ||||| || | || || | || Sbjct 7396 CTCCTCCAGCGGTTTCGATACCCAAAGAAAGAGGAGCAACATCCACCAAGAGAACGTCTT 7455 Query 517563 GAAGTTTTTCATC-AGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCA 517621 | | |||| | | || | || | | ||| ||| |||| | ||||| || || || Sbjct 7456 GGA-TTTTGGAGCTTGTATCTCCGATCAAAATGGCTCCTTGGACGGCAGCGCCGTAGGCG 7514 Query 517622 ACAGCTTCATCAG----GATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGA 517677 ||||| ||||| | ||| |||| |||| || |||| || ||| |||| | Sbjct 7515 ACAGCCTCATCTGGGTTGATGGACAGATTCA---AG-GTTTTGCCGCAGAAGAAATCTTG 7570 Query 517678 AAGAAGTTGTCTTACCTTAGGAATACGAGAT-GATCCTCCAACTAATACAATTTCATGCA 517736 ||| | | | | ||| || || | ||| || || || || || || | || || | Sbjct 7571 AAGCATCTTTTGGATCTTCGGGAT-CCTGATGGAACCACCGACCAAGACTACATCGTGAA 7629 Query 517737 CCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTC 517796 |||||||| || | || ||| | || || || | ||| | | Sbjct 7630 TAGCACCTTTATCCAACTTAGCGTCAGCCAAAGATCGCTCGACCGGCGCCAGAGTGGACC 7689 Query 517797 TAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGAC-ATTATAA-TC 517854 | |||| || || || || |||||| | || || || || | | | || || || Sbjct 7690 TGAACAGATCCATGCAGAGCTCCTCGAATCTTGCCCTGGT--GACTTTCGAGTAAAAGTC 7747 Query 517855 AATTCCTTCGAACAAAGAATCAA-CTTCAATCGTAGTTTGAGTCGAAGAA--GATAGTGC 517911 | |||||| ||||| ||||| || ||| | | | || ||| ||| | ||| | Sbjct 7748 GACACCTTCGTGCAAAGCATCAATCTCCAAGC-TCGCTTCAGTGCTGGAACTCAAAGTCC 7806 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA 517971 | ||||| | ||| || || || || | || || || || | | | |||| Sbjct 7807 TC--TTAGCCCTTTCGCAGGCGGTTCTCAACCTACGCAAAGCCCTCGAGTTTCCGCTCAA 7864 Query 517972 ATCTGTTTTATATTTTCTCTTGAAATCTTCAAC-ACACCATGTTACAAGACGATTATCAA 518030 ||| | ||| | || |||||||| |||||||| | | || | || | ||||||||| | Sbjct 7865 ATCCTTCTTAAACTTCCTCTTGAACTCTTCAACGAAATGAT-TCACCAAACGATTATCGA 7923 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCAT 518087 ||||||| |||||||| | ||||| || | || | | |||| ||||| ||| | Sbjct 7924 AATCTTCTCCTCCCAAGTGAGTATCACCAGCAGTTGACTTGACTTCAAAAAGAGATCCTT 7983 Query 518088 CTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 518147 | || | | |||| | ||||| |||||||| |||| ||| || || | || | Sbjct 7984 CATCGATTGTTAAAATCGAGACATCGAAAGTTCCACCGCCCAAATCGAAGATCAAAACGT 8043 Query 518148 TCATTTCTTTGTCTT---GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 || ||| | | ||| ||| ||||| | ||| || || ||||| ||||| ||||||| Sbjct 8044 TC--TTC-TCGCCTTTCAAGTTCTTATCCAAACCGTAAGCCAAAGCTGCAGCGGTTGGTT 8100 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 | || || || ||||| || || || || ||||| ||| |||||||| ||||| || | Sbjct 8101 CGTTGATGATCCTCAAGACGTTGAGTCCGGCAATGGCTCCAGCATCTTTGGTGGCCTGCC 8160 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 518307 |||| || ||||| || || || |||||||| || || || || Sbjct 8161 TTTGGGAGTCGTTGAAGTACGCCGGAACAGTGATCACAGCGTC 8203 >seq4008 Length=63261 Score = 201 bits (222), Expect = 9e-46 Identities = 697/1074 (65%), Gaps = 14/1074 (1%) Strand=Plus/Minus Query 517238 TTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAAT 517297 ||||| || || || || ||| || || || | ||||| |||||||| | ||| || Sbjct 32342 TTGTTGGTGGACTTTTCGATGGCGGTTACGTTCAAGATACCGTTGGCATCGATATCGAAG 32283 Query 517298 GTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTT 517357 |||||||| ||||| ||||| || ||| | || |||||||| || ||| | ||| || Sbjct 32282 GTGACTTCGATTTGTGGGACACCCCTCGGCGCTGGTGGGATTCCGGTCAACTCGAATTTT 32223 Query 517358 CCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACT 517417 |||| | || || || || || | || ||||| ||| | | ||||| ||| Sbjct 32222 CCCAAGATGTTGTTGTCCTTGGTCATGGCACGCTCACCTTCGTAGACCTGGATCAATACT 32163 Query 517418 ACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTG 517477 | | ||| || || || || || || || | || || || ||||| || ||| Sbjct 32162 CCGGGTTGGTTGTCGGAGTAGGTGGTGAAGGTTTGGGTTTGCTTGGTTGGAATGGTGGTG 32103 Query 517478 TTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGA 517537 || | | || | | |||||| | ||| || || ||||| | ||| ||||| | ||| Sbjct 32102 TTACGCTTGATGAGAGCGGTCATGACACCTCCGGCAGTTTCGATACCGAGAGACAATGGA 32043 Query 517538 GTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGC 517596 || || || | |||| | || ||||| ||| | | ||| ||||| | || Sbjct 32042 GTTACGTCGAGGAGGAGCAGATCTTGAACAGCCTCAGACTTGTCACCGTGCAAGA-TGGC 31984 Query 517597 TGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTT 517656 ||||| | ||| |||||||| || || |||||||| || || | | | || | || Sbjct 31983 GGCTTGGACAGCGGCACCATAGGCGACGGCTTCATCGGGGTTGATGGACTTGTTCAATTC 31924 Query 517657 TTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTC 517715 || |||||||| |||| ||| |||| || | | || ||||| ||||| | || || | Sbjct 31923 CTTTCCATTGAAGAAATCTTGCAAGAGCTTTTGT-ACTTTAGGGATACGGGTGGAGCCAC 31865 Query 517716 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 517775 | || || || || ||||| | || || |||| || | || | || | Sbjct 31864 CGACCAAGACGATGTCATGGATTTGGCTCTTGTCCATCTTGGCGTCACGGATGGACTTCT 31805 Query 517776 CAACGGGTTCAA-GACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTA 517834 | ||||| || | | | | || |||| || | | ||||||||| | || || Sbjct 31804 CGACGGGCTCCATGGTACAC-CTGAACAGATCAGCGTTCAATTCTTCGAACCTGGCCCTG 31746 Query 517835 GTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTT 517892 || || || | || || || ||||||||||| || || | ||| || ||| || Sbjct 31745 GT--GATGGAAGTGTAGAAATCGGCACCTTCGAACAAGGAGTCGATTTCGATGCTAGCTT 31688 Query 517893 GAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG 517952 | || || || || || | ||| || || | ||| || || ||||| || | || | | Sbjct 31687 GGGTGGAGGACGAGAGGGTACGCTTCGCCCTTTCGCAGGCAGTCCTGAGACGACGCAGAG 31628 Query 517953 CTT--TTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCA 518010 | ||| || || ||| || | || | || | |||||| |||| || | Sbjct 31627 CACGCTTGTTGGAGGA--CAAGTCCTTCTTGTGCTTGCGCTTGAATTCTTGCACGAAGTG 31570 Query 518011 TGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCT 518070 | || | || ||||| ||||||||||| ||||| | ||| | || | || | | Sbjct 31569 GTTGACCATGCGGTTATCGAAATCTTCACCACCCAAGTGAGTGTCACCAGCGGTGGACTT 31510 Query 518071 TACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCAT 518130 |||| ||| | |||||||| | | || | || ||||| ||| || || |||| Sbjct 31509 GACTTCGAAGATACCATCTTCGATGGTCAGGATAGACACATCGAAGGTACCGCCGCCCAA 31450 Query 518131 ATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGC 518190 ||| ||||| || || ||| | || | || || || || | |||||| || | || Sbjct 31449 ATCGAAAATGAGCACGTTCCTCTCGCCGACTCCCTTCTTGTCCAAACCATAGGCGATGGC 31390 Query 518191 AGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATC 518250 || ||||||||||| || || || | ||| || | | |||| || |||| ||||| Sbjct 31389 GGCGGCAGTTGGTTCGTTGATGATACGCAACACCTGCAAGCCAGAGATGGTTCCAGCATC 31330 Query 518251 TTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 || |||||||| | || |||||||| || || || || ||||| ||||| || Sbjct 31329 CTTGGTGGCTTGACGCTGGGAATCGTTGAAGTAAGCTGGTACAGTGATAACAGC 31276 Score = 89.7 bits (98), Expect = 4e-12 Identities = 130/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 ||||||| || || | || || || || |||| | ||||| ||||| || || ||| Sbjct 30546 CAAAAATTGTGTTATTGGGGTTCATGGCCACTTGGTTCTTGGCGGCATCACCGATGAGAC 30487 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | || || || || || | ||||| ||||| || ||||| || || || || || |||| Sbjct 30486 GCTCGGTGTCGGTGAAAGCCACATAAGATGGGGTGGTGCGGTTGCCCTGGTCGTTGGCAA 30427 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 ||||||| || || |||| ||| | || || ||||| | || || || | ||||| Sbjct 30426 TAATTTCGACCTTTCCATGTTGGAAAACTCCAACACATGAGTAGGTGGTACCCAGATCAA 30367 Query 518703 TACC 518706 |||| Sbjct 30366 TACC 30363 >seq3455 Length=151992 Score = 118 bits (130), Expect = 8e-21 Identities = 144/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 635406 ATGCTCACAAGGCAGGAACCAAAGAAGGATAT-AAATGTACCCTAATTTTGACAGAGGGA 635464 |||| || | || ||||| |||||| | ||| |||||||| || || || || |||||| Sbjct 64545 ATGCCAACGAAGCTGGAAC-AAAGAACGCTATGAAATGTACGCTGATCTTAACTGAGGGA 64603 Query 635465 GATTCAGCTAAAACATTCGCTATGTCTGGTCTTAATGTTATTGGAAGAGATTATTATGGA 635524 |||||||| ||| | || || | ||||| || |||||| ||| | ||||| |||||| Sbjct 64604 GATTCAGCCAAATCTTTGGCCGTTTCTGGACTCGGTGTTATAGGACGCGATTACTATGGA 64663 Query 635525 GTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaaaaaaTTGCT 635584 || |||||||| | || |||||||||||||| | || || | | ||| | ||| | Sbjct 64664 GTATTCCCACTGCGTGGTAAACTTTTGAATGTACGCGAAGCCACGCATAAGCAGATTCTT 64723 Query 635585 GATAATGAGGAAAT 635598 || |||| ||||| Sbjct 64724 GAGAATGCTGAAAT 64737 >seq1217 Length=60648 Score = 109 bits (120), Expect = 4e-18 Identities = 242/360 (67%), Gaps = 5/360 (1%) Strand=Plus/Minus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||| ||||||||||||||||| | || | ||| || ||| ||||| ||| | ||| Sbjct 20437 ATCGAAATCTTCACCTCCCAAATGGGTGTCTCCGTTGGTGGCTACTACTTCGAAGACTCC 20378 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 || || | | | || | ||||| ||| || || |||| ||| || | | || Sbjct 20377 ATTGTCGATGGTGAGGAGGGACACATCGAAGGTACCGCCGCCCAAATCGAATACCAAAAC 20318 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 ||| |||| | | | || || || | || || |||| |||||| || || ||||| Sbjct 20317 GTTCTTTTC---GCCGTCCTTCTTGTCCAAGCCGTAAGCAATAGCAGCGGCGGTGGGTTC 20261 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 || || || |||| || || | ||| || || || ||||| || |||||||| | Sbjct 20260 GTTGATGATCCTCATCACGTTCAAACCGGCGATGACACCAGCATCCTTGGTGGCTTGACG 20201 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTTTACCAA 518324 ||| | |||||| || || || || ||||| | ||||| | ||| | |||||| |||| Sbjct 20200 TTGAGCATCGTTGAAGTAAGCGGGTACAGTGACGACGGCGTGAGTGACCTTCTTGCCCAA 20141 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384 ||| || || |||| ||||| || | |||| ||| | || |||| || |||| Sbjct 20140 -ATAGGCTTCAGCGGTTTCCTTCATCTTGCCCAAAACCATAGCGGAGATTTCCTCGGGGG 20082 >seq435 Length=216619 Score = 86.0 bits (94), Expect = 5e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 366997 GTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCAT 367056 |||||||| | || || || |||||||| ||||||||||||| || | |||| ||| Sbjct 209872 GTAGCCACGGTTGCTTTCGGAATGGGTATAGATAAACCGGATGTGAGGAATATTATACAT 209931 Query 367057 TATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGAT 367116 || || ||| |||| || | ||| |||| ||||| ||| |||| ||||| || | ||| Sbjct 209932 TACGGCGCTTCCAAAGATTTAGAAAGTTACTATCAGGAAGTTGGAAGAGCGGGAAGAGAT 209991 Query 367117 GG 367118 || Sbjct 209992 GG 209993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780591651682900