Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1908 141 1e-28 seq4643 127 3e-24 seq4241 114 2e-20 >seq1908 Length=44741 Score = 141 bits (156), Expect = 1e-28 Identities = 912/1442 (63%), Gaps = 47/1442 (3%) Strand=Plus/Plus Query 111820 CTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCA 111879 |||| ||||| || ||||||| |||||||| || || || | || ||| || | | Sbjct 4831 CTGATTGTGCAATGATTTCAAAGTCTGCTGGTGGCATTGGAATTAATATTCATAATATTA 4890 Query 111880 GAGCCAACAAGT-CTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATG 111938 |||| | || | | | |||| |||||| ||| |||| ||||| ||| | || ||| Sbjct 4891 GAGC-AGCAGGAACACCAATTATTGGTACAGGCGGTAAATCTGATGGAATTGTGCCTATG 4949 Query 111939 CTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCT 111998 | || || ||| |||||| | || |||||||||| ||| | || || || Sbjct 4950 TTGAAAGTGTTCAACCATACAGCGAGGTACGTAAACCAAGGTGGTAGACGACCTGGTGCT 5009 Query 111999 ATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTC 112058 | ||||| ||| | ||||| ||||| || || || ||||| ||| |||| | | Sbjct 5010 GTTGCAGTGTATTTAGAGCCTTGGCATGCTGACATTATGGAATTC-TTGAATC---TAAA 5065 Query 112059 AACCAA----GGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCC 112114 || || || |||| |||| | | | ||| | || | ||| | ||||| || Sbjct 5066 AAAGAATACTGGAAATGAAGAGGAAAGAGCCAGAGATTTGTTTTATGCTTTGTGGATACC 5125 Query 112115 AGATCTCTTCATGAAGAGAGTTGAG---GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGA 112171 ||| | || ||||| | || || || |||| | ||||| || | || || | Sbjct 5126 AGACTTATTTATGAAACGTGTAGACACTGATAGTGTC---TGGTCACTGATGTGCCCTCA 5182 Query 112172 CAAGGCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGT 112230 ||| || || | || || ||| | ||| || ||||| ||| ||||| ||| | Sbjct 5183 TAAGTGTCCAGGATTATCGGAATGCTG-GGGCGAAGAGTTCGAAAAGCTCTATGAAAAAT 5241 Query 112231 ACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTC 112290 |||| | ||| || | | | || ||| || || ||| || ||| Sbjct 5242 ACGAAGCTGAAGGTAAATATAACAAACAGATACCGGCTAGAGAAGTTTGGCGCGCAATTG 5301 Query 112291 TCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAA 112350 | | || |||| ||| |||| || |||||||| ||||| || ||||| ||| || Sbjct 5302 TTATCTCGCAAATTGAGGTTGGTGTTCCTTATATGCTGTACAAGGATGCCTGCAACTCAA 5361 Query 112351 AGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGG 112410 ||||||| |||||||||||||| |||||||| || || || || |||||||| ||| Sbjct 5362 AGAGTAACCAAAAGAATTTGGGGACAATCAAGAGCTCGAATCTGTGCACAGAAATTATGG 5421 Query 112411 AATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT 112470 ||| ||| | ||||| || || || || || | || || || || | | || Sbjct 5422 AATATACTGCGCCCGATGAAACTGCCGTCTGCAATTTGGCGTCCATTGCCGTTAATATGT 5481 Query 112471 ATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTG 112530 ||| | ||||| || | || || | ||| | | ||| |||| ||| | Sbjct 5482 TTGTAAAGCCAGA---TAAATCTTTCGACTTCATCAAATTAAAGGAACTTACCAAACTAG 5538 Query 112531 TCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTC 112587 | || | ||| || |||| | || || | || | ||| || || ||| ||| Sbjct 5539 TTACTAGAAATCTGAACAAGATCATCGACATCAACTATTATCCTGTACCTGA---AGCTA 5595 Query 112588 GTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTAT 112647 | || || ||||||||||| |||||||||||| | ||| | || || | || |||| | Sbjct 5596 GAAACTCAAATATGAGACATCGTCCAATTGGTATTGGTATACAGGGATTGGCCGATGCTT 5655 Query 112648 TCATTCTT--TGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTAT 112705 | | |||| || | | | || || ||| ||||| | | | |||| | || Sbjct 5656 TTA-TCTTGATGAGGATTC-CGTTCGAAAGCGAAGAAGCACAAAAGGTTAATGTACAGAT 5713 Query 112706 ATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGG 112765 ||| ||||| | ||| | | ||| | ||| | || | || | || || ||||| Sbjct 5714 ATTCGAGACTCTTTATTATGGAGCTTTAGAGTCCAGCTGTGAAATTGCTGAAAGAGATGG 5773 Query 112766 TCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATG 112823 ||||| || | || || ||||| || || ||||| | || |||| ||||||| Sbjct 5774 ACCATACTCGACATACGAAGGATCTCCGGC--CAGTAAGGGAATTCTACAATATGATATG 5831 Query 112824 TGGGAAGGTGAGACCA--AGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGG 112881 | |||| || | |||| || || | | || |||| || | || ||| ||| Sbjct 5832 T-GGAATGTAACACCAACAGATTTA-TGGGATTGGGCTGCCTTAAAAGAAAAAATCGCCA 5889 Query 112882 AGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA 112941 || | || | | || ||| | | || || |||||||| || || || |||| Sbjct 5890 AGCACGGAATCAGGAATTCTCTCCTTCTAGCTCCTATGCCAACGGCTAGTACTGCCCAAA 5949 Query 112942 TCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCC 113001 | || || |||||||| | | | ||||| ||||| | || || || | ||| | Sbjct 5950 TTTTAGGAAATAATGAGTCCATCGAACCGTACACAAGTAATATTTACACTCGCAGAGTGC 6009 Query 113002 TCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTC 113061 || ||||| || || |||| | ||| | | | || || ||| | || | Sbjct 6010 AAGCTGGAGAATTCCCAGTTATCAATCATCATTTATTAAAAGATCTGGTAGAACTAGGCC 6069 Query 113062 TCTGGTCCAAGGATATGAAG---GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATA 113118 | ||| | ||| |||||| | || || | || ||||||||| || || | Sbjct 6070 TGTGGGACGAGGTCATGAAGAACCAACTTATCGCCAA---CTATGGTTCCATCCAGAACA 6126 Query 113119 TTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGA 113178 | |||||||||||| || ||||| | || || || ||||| ||| | || Sbjct 6127 TCCCCAGTATTCCAGATGATATCAAGAAACTATATAAAACTGTGTGGGAGATCTCGCAGA 6186 Query 113179 AGGATGTCATTGACATGGCCGCAGATCGTGGTCGC-TTCATTGATCAAAGTCAAAGTATG 113237 || ||| || ||||| ||||||||||||| ||| || |||||||| ||||| || || Sbjct 6187 AGACTGTGATCAACATGTCCGCAGATCGTGG-CGCATTTATTGATCAGAGTCAGAGCCTG 6245 Query 113238 AA 113239 || Sbjct 6246 AA 6247 >seq4643 Length=985661 Score = 127 bits (140), Expect = 3e-24 Identities = 669/1051 (64%), Gaps = 38/1051 (4%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| | ||| | || || | ||||| || ||||| |||||| | |||| Sbjct 332814 CCTCAGCACATGCTGATGAGAGTGGCTGTGGGTATACACGGGGAGGATATTAAGTCTGCA 332873 Query 111672 TTGGAGACATACGACAAGATGTCCCGTG----GTATGTTCATCCACGCAACACCAACCCT 111727 | ||||||||| | | ||||| || |||| |||| ||| || | ||||| | Sbjct 332874 ATTGAGACATACCATTATATGTC---TGAAAAGTAT-TTCACCCATGCTAGTCCAACATT 332929 Query 111728 CTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAA--CAAG 111785 ||| || || || | | || || || | ||||| |||||| | | || Sbjct 332930 ATTCTCTGCAGGCACTCATAAGCCACAGTTGAGCTCATGTTTT-TTATTGATGATGCCAG 332988 Query 111786 GAGGATTCAATCAATGGCATTTACG---GCACTCTCACTGAATGTGCCCAAATCTCAAAG 111842 || ||||||| ||| ||||| ||| | |||| ||||| || |||||| Sbjct 332989 AAG-ATTCAATTGTTGGGATTTATAAATGCATTT---CTGATTGTGCAATGATTTCAAAG 333044 Query 111843 TGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAG 111901 | |||||||| || || || | || ||| || | ||||| | || | | | |||| Sbjct 333045 TCTGCTGGTGGCATTGGAATTAATATTCATAATATAAGAGC-AGCAGGAACACCAATTAT 333103 Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC-GTATTTAACGCCACAG 111960 |||||| ||| |||| |||||| |||| ||| ||| || || ||| |||| Sbjct 333104 TGGTACAGGCGGTAAATCGGATGGTTCAATTCGGATGGTTCAAAGTGTTCAACAATACAG 333163 Query 111961 CGCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCAT 112020 || | || || ||||||| ||| | || || || | || || ||| | ||||| | Sbjct 333164 CGAGGTACGTGAACCAAGGTGGTAGACGACCTGGTGCTGTTGCTGTGTATTTGGAGCCGT 333223 Query 112021 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGC 112080 |||| || ||||| ||||| ||||| | | || ||| |||| |||| Sbjct 333224 GGCATGCAGATATTATGGAATTCCTGAATCTAAAAAAGAATACAGGGAATGAAGAGGAAA 333283 Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG- 112139 | | | ||| | || | || | ||||| ||||| | || ||||| | || || Sbjct 333284 GAGCCAGGGATTTGTTTTATGCCTTGTGGATACCAGACTTATTTATGAAACGTGTAGACA 333343 Query 112140 --GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCC 112196 || || | ||||| || | || || | ||| || || | || || || Sbjct 333344 CTGATTCTGTC---TGGTCACTGATGTGCCCTCATAAGTGTCCAGGATTATCGGACTGTT 333400 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG 112256 | ||| || ||||| ||| ||||| ||| ||||| | ||| || | | Sbjct 333401 G-GGGCGAAGAGTTCGAAAAACTCTATGAAAAATACGAAGCCGAAGGTAAATATAATAAA 333459 Query 112257 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316 | | || ||| || || ||| || ||| | | || |||| ||| |||| Sbjct 333460 CAGATACCGGCTAGAGAAGTTTGGCGCGCAATTGTTATCTCGCAAATTGAGGTTGGTGTT 333519 Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376 || |||||||| ||||| || ||||| ||| ||||||||| ||| |||||||||| Sbjct 333520 CCTTATATGCTGTACAAGGATGCCTGCAACTCAAAGAGTAACCAACAGAATTTGGGCACA 333579 Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436 |||||||| || ||||| || |||||||| |||||| ||| | || || || || Sbjct 333580 ATCAAGAGCTCGAACCTGTGCACAGAAATAATGGAATATACTGCGCCCGACGAAACTGCC 333639 Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 112496 || ||||| | ||||| || || | | || ||| | ||||| | | |||| Sbjct 333640 GTCTGTAATTTGGCATCCATTGCCGTTAATATGTTTGTAAAACCAGATAAAT---CATTC 333696 Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556 |||| ||| | | ||| |||| ||| || || | ||| || |||| | || Sbjct 333697 GATTTCATCAAATTAAAGGAACTTACCAAACTAGTTACTAGAAATCTGAACAAGATCATC 333756 Query 112557 GATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613 || | || | ||| || || ||| ||| | || || ||||||||||| |||||| Sbjct 333757 GACATCAACTATTATCCTGTACCTGAA---GCTAGAAACTCAAATATGAGACATCGTCCA 333813 Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATG 112644 |||||| | ||| | || || | || |||| Sbjct 333814 ATTGGTATTGGTATACAGGGATTGGCCGATG 333844 >seq4241 Length=192509 Score = 114 bits (126), Expect = 2e-20 Identities = 604/950 (64%), Gaps = 27/950 (3%) Strand=Plus/Minus Query 112296 TCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 112355 || |||| ||| |||| || || ||| | ||||| || ||||| ||| ||||| Sbjct 52710 TCGCAAATTGAGGTTGGTGTTCCTTACATGATGTACAAGGATGCCTGCAACTCGAAGAGC 52651 Query 112356 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTT 112415 || ||| |||||||||| ||||| || || ||||| || |||||||| |||||| Sbjct 52650 AACCAACAGAATTTGGGGACAATCAAAAGCTCGAACCTGTGCACAGAAATAGTGGAATAC 52591 Query 112416 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTG 112475 || | || || || || || ||||| | || ||||| || | || || ||| Sbjct 52590 ACTGCGCCCGACGAAACTGCCGTCTGTAATTTAGCGTCAATTGCCGTTAACATGTTTGTA 52531 Query 112476 GATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACA 112535 | ||||| | | |||| |||| ||||| | ||| | || ||| || || Sbjct 52530 AAACCAGATAAAT---CATTCGATTTCATCAAACTGAAGGAACTCACCAAACTAGTTACT 52474 Query 112536 AAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTG---CTCGTAAA 112592 | ||| || |||| | || || | || | || || || | ||| || | || Sbjct 52473 AGAAATCTGAACAAGATCATCGACATCAACTACTATCCTGT---GCCTGAAGCTAGAAAC 52417 Query 112593 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT 112652 || ||||||||||| |||||||||||| ||||| | || ||| | || |||| || | | Sbjct 52416 TCAAATATGAGACATCGTCCAATTGGTATCGGTATACAGGGTTTGGCCGATGCTTTTA-T 52358 Query 112653 CTT--TGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTG 112710 ||| || | | | || || ||| ||||| | | | |||| | ||||| | Sbjct 52357 CTTGATGAGGATTC-CGTTCGAAAGCGAAGAAGCACAAAAGTTAAATGTACAGATATTCG 52299 Query 112711 AGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCAT 112770 |||| | || | | ||| | || |||| | || | || || ||||| || | Sbjct 52298 AGACTCTTTACTATGGAGCTTTAGAAACGAGCTGTGAAATCGCTGAAAGAGATGGACCGT 52239 Query 112771 ATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATGTGGGA 112828 || ||| | | | || ||||| || || |||||| | || |||| ||||||| ||| Sbjct 52238 ATTCAACTTATAAAGGATCTCCGGC--CAGCAAGGGAATTCTCCAATACGATATGT-GGA 52182 Query 112829 AGGTGAGACCAAGCTTCACTA--CGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAG 112886 | || | ||||| | ||| || |||| ||| | |||||| ||| || | Sbjct 52181 ATGTAACACCAA-CAGACCTATGGGATTGGGCCGCCTTAAAGGAAAAAATCGCCAAGCAC 52123 Query 112887 GGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 || | | || ||| | | ||||| ||||||||||| ||| || ||||| || Sbjct 52122 GGAATCAGGAATTCTCTCCTTCTTGCACCTATGCCAACAGCTAGCACTGCCCAAATTTTA 52063 Query 112947 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCG 113006 || || || || | ||| ||||| ||||| | ||||| ||| | ||| | || Sbjct 52062 GGAAACAACGAGTCCTTCGAACCGTACACAAGTAACATTTATACTCGTAGAGTGCAAGCC 52003 Query 113007 GGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGG 113066 ||||| ||| || |||| | ||| | || | || || || | || || ||| Sbjct 52002 GGAGAATTTCCAGTTATCAATCATCATTTATTGAAGGATCTAGTTGAACTAGGCCTGTGG 51943 Query 113067 TCCAAGGATATGAAG---GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTG 113123 | || |||||| | || || | || ||||||||| ||||| || Sbjct 51942 GACGCGGTGATGAAGAACCAACTTATCGCCAA---CTATGGTTCCATCCAAAACATCCCT 51886 Query 113124 GATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGAT 113183 ||||||||| | || |||| ||||| || || ||||| ||| | || | | Sbjct 51885 ACAATTCCAGATAATATCAAGAGTTTGTATAAAACTGTGTGGGAGATCTCGCAGAGGACT 51826 Query 113184 GTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAG 113233 | || ||||||| |||||| |||| ||| || ||||| || || || Sbjct 51825 TTGATCAACATGGCTGCAGATTGTGGCGCCTTTATAGATCAGAGCCAGAG 51776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620706319348000