Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1908 421 7e-113 seq4450 318 7e-82 seq4241 279 6e-70 seq4643 273 2e-68 seq1784 86.0 7e-12 >seq1908 Length=44741 Score = 421 bits (466), Expect = 7e-113 Identities = 1198/1844 (65%), Gaps = 27/1844 (1%) Strand=Plus/Minus Query 47009 TTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCAT 47068 ||| || ||||| || || | |||||||||||| ||| ||||| |||| |||||||| Sbjct 6347 TTTCGTGCGTAAGTAGTAAAGACCAGTCTTTAATCCTTTCCTCCACCCATGGAAATGCAC 6288 Query 47069 ACTAGTTAATTTAGAATAAC-TA----GGTTCTGAAATATGAATATTAAGAGATTGACTC 47123 | |||| || || ||| || || | | || || || || || |||||| Sbjct 6287 -CGAGTTCAT----AACAACGTACGATGGGTTAGCTATGTGTATGTTCAGGCTCTGACTC 6233 Query 47124 TGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCC 47183 |||||||||||||| || | ||| || | ||| | | | | | | || | |||||| Sbjct 6232 TGATCAATAAATGCGCCACGATCTGCGGACATGTTGATCACAGTCTTCTGCGAGATCTCC 6173 Query 47184 CATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGATTAG---TATTTTGAATAGAT 47240 || || |||||||| | || || || || ||||| | | | | | || || || || Sbjct 6172 CACACAGTTTTATATAGTTTCTTGATATCATCTGGAATACTGGGGATGTTCTGGATGGAA 6113 Query 47241 CCTCCgttttctataattttgttttttaattcatttgaccaaagttttcgttcagttaat 47300 || ||| | |||| || ||| || | | | ||| || | |||| | Sbjct 6112 CCATAGTTGGCGATAAGTTGGTTCTTCATGACCTCGTCCCACAGGCCTAGTTCTACCAGA 6053 Query 47301 gtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATAT 47360 |||||| | |||| |||| | || | | |||||||||| | | ||||| || | || Sbjct 6052 TCTTTTAATAAATGATGATTGATAACTGGGAATTCTCCAGCTTGCACTCTGCGAGTGTAA 5993 Query 47361 ATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCT 47420 ||||||||||| || ||||| || || ||||||||||| |||||||| ||||| || Sbjct 5992 ATATTACTTGTGTACGGTTCGATGGACTCATTATTTCCTAAAATTTGGGCAGTACTAGCC 5933 Query 47421 GTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNN 47480 || ||||| | || | | | ||| || | ||| | || || | Sbjct 5932 GTTGGCATAGGAGCTAGAAGGAGAGAATTCCTGATTCCGTGCTTGGCGATTTTTTCTTTT 5873 Query 47481 NNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATT 47540 ||||||||| | ||||| ||| |||||||| | ||||||||| |||||| Sbjct 5872 AAGGCAGCCCAATCCCATAAATCTGTTGGTGTTACATTCCACATATCATATTGTAGAATT 5813 Query 47541 CCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCA 47600 || ||||| |||||| || | ||||| || || || | | || ||| | |||| Sbjct 5812 CCCTTACTGGCCGGAGATCCTTCGTATGTCGAGTATGGTCCATCTCTTTCAGCAATTTCA 5753 Query 47601 CAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTT 47660 || || | || || || | |||||| | || || ||||| | || || | || | Sbjct 5752 CAGCTGGACTCTAAAGCTCCATAATAAAGAGTCTCGAATATCTGTACATTAACCTTTTGT 5693 Query 47661 GCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACA 47720 |||||| ||| || ||| || | ||| |||||||| || | | Sbjct 5692 GCTTCTTCGCTTTCGAACGGAATCCTCATCAAGATAAAAGCATCGGCCAATCCCTGTATA 5633 Query 47721 CCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTG 47780 |||||||||||||| | ||| | |||| || |||||| |||| ||||| | | Sbjct 5632 CCAATACCAATTGGACGATGTCTCATATTTGAGTTTCTAGCTTCAGGTACAGGATAATAG 5573 Query 47781 TTTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTA 47840 || || || || || || || ||| || ||| ||||||| Sbjct 5572 TTGATGTCGATGATCTTGTTCAGATTTCTAGTAACTAGTTTGGTAAGTTCCTTTAATTTG 5513 Query 47841 TTAAAATCAAACTTGTTATTTA---TAACAAACCTATTAAGTGCTATAGATGCTAGATTA 47897 | || || || |||| | | |||||| |||||| || || || || | ||| Sbjct 5512 ATGAAGTCGAAAGATTTATCTGGCTTTACAAACATATTAACGGCAATGGACGCCAAATTG 5453 Query 47898 CATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACAT 47957 || || || |||| || |||||||| || ||||| | || ||||| | Sbjct 5452 CAGACGGCAGTTTCATCGGGCGCAGTATATTCCATAATTTCTGTGCACAGATTCGAGCTC 5393 Query 47958 TTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATA 48017 ||||| || |||||||| | || ||| | ||| || || |||||||| |||||| Sbjct 5392 TTGATTGTCCCCAAATTCTTTTGGTTACTCTTTGAGTTGCAGGCATCCTTGTACAGCATA 5333 Query 48018 AAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTT 48077 |||| ||| || || || || || || | |||||| |||||| | Sbjct 5332 TAAGGAACACCAACCTCAATTTGCGAGATAACAATTGCGCGCCAAACTTCTCTAGCCGGT 5273 Query 48078 ATAACAGCTC--TAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCAT 48135 || | | | || |||| ||| ||||||||| ||| | ||| || || || | Sbjct 5272 AT--CTGTTTGTTATATTTACCTTCAGCTTCGTATTTTTCATAGAGCTTTTCGAACTCTT 5215 Query 48136 CCCCATACACATTATC-TAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCA 48194 | || | |||| ||| || ||||| | || ||| ||||||| |||||| | | Sbjct 5214 CGCCCCAG-CATTCCGATAATCCTGGACACTTATGAGGGCACATCAGTGACCAGACACTA 5156 Query 48195 TCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTA 48254 ||| | | ||| | ||||||||| ||||||||||| | ||| ||| ||||| || Sbjct 5155 TCAGTGTCTACACGTTTCATAAATAAGTCTGGTATCCACAAAGCATAAAACAAATCTCTG 5096 Query 48255 GTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAG-TTCAAGAAAGTCCATTATATCAGC 48313 | |||| |||||||| ||| ||||| |||| || |||||||| ||||| || ||||| Sbjct 5095 GCTCTTTCCTCTTCATTTCCAGTATTCTTTTTTAGATTCAAGAAT-TCCATAATGTCAGC 5037 Query 48314 ATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTAT 48373 |||||| || |||||||| | ||| | |||| |||||| |||| ||||| | || Sbjct 5036 ATGCCAAGGCTCTAAATACACTGCAACAGCACCAGGTCGT---CTACCACCTTGGTTTAC 4980 Query 48374 ATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATT 48433 || || || |||| ||| | ||| | ||||| || ||||| |||| ||| |||| Sbjct 4979 GTACCTCGCTGTATGGTTGAACACTTTCAACATAGGCACAATTCCATCAGATTTACCGCC 4920 Query 48434 GGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACC 48493 || || ||| |||| ||||| |||||| ||| ||| || || ||||| Sbjct 4919 TGTACCAATAATTGGTGTTCCTGCTGCTCTAATATTATGAATATTAATTCCAATGCCACC 4860 Query 48494 TGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATC 48553 || || || || | ||||| || | | |||||| || | | ||| Sbjct 4859 AGCAGACTTTGAAATCATTGCACAATCAGAAATGCATTTATAAATACCAGCAAGTGAATC 4800 Query 48554 ATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAA 48613 ||| ||| | |||| |||||| || || || | | ||| |||| | ||| Sbjct 4799 TTCTGGCATCATCAATAAAAAACATGAGCTCAACTGTGGCTTAGGAGTGCCTGCAGAAAA 4740 Query 48614 TAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAAC 48673 |||||||||| ||||| |||| | || || || | | | ||||| ||||| | Sbjct 4739 TAATGTTGGACTAGCATGGGTAAAATACTTTTCAGACATATAATGGTATGTCTCAATTGC 4680 Query 48674 AGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCT 48733 ||| | || ||| | ||||||||| | || ||| | ||| | ||| | |||||||| Sbjct 4679 AGACTTAATGTCCTCTCCATGTATACCCACAGCTACTCTCATCAGCATGTGCTGAGGTCT 4620 Query 48734 TTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAA 48793 |||||||| |||||||| || ||||| | |||||| || ||||| || || |||||||| Sbjct 4619 CTCAACAATCTTGTTATTAATCTTCAACAAATATGACTTCTCCAAAGTCTTGAAACCAAA 4560 Query 48794 ATAGTTGTATGAAAAGTCGTTATCATTAATAATTGATGAATTTA 48837 || ||||||||||| || ||||| || || ||||||||| Sbjct 4559 GTAATTGTATGAAAAATCCCGATCATATATTATACATGAATTTA 4516 Score = 86.0 bits (94), Expect = 7e-12 Identities = 176/257 (68%), Gaps = 5/257 (2%) Strand=Plus/Minus Query 48905 TTCTACAACATCACTAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCT 48964 ||||||| | |||| ||| |||||||||||| ||||| | |||||||| | || | Sbjct 4361 TTCTACAT-ACCACTGAATTGTTTTTTTGTTTCCTTATGTAAATTAGATACTGCAATGCG 4303 Query 48965 AGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTA--CTAGATATTTCTGCT 49022 |||||| || ||| ||||||||||||| |||| | ||| | || | | ||||| Sbjct 4302 AGCAGCCAAAATACCATAATCTGGATGTATTG-GGGACAACCAAGCT-GCAGTCTCTGCA 4245 Query 49023 GCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCATT 49082 || | | | |||| ||| | || || ||||| | ||||| |||| || ||| |||| | Sbjct 4244 GCAAGTGTGTCTAGTTCGATTGTTGTCACACCAGCATATAAGCCTTTAACAACATTCAGT 4185 Query 49083 GCTATATTTACTGGATCTATATGATCCATATCCAGTCCATAACATAAtttttttATTCTA 49142 | || | | ||||| | | || ||| | |||||| || | || | || Sbjct 4184 GTAATTGTCAGAGGATCAACAAATTCTGTATTTAATCCATAGCACAGCTTCACCAGCCTG 4125 Query 49143 GATGTAATTTTATCAAA 49159 || ||||||||||| || Sbjct 4124 GACGTAATTTTATCCAA 4108 >seq4450 Length=177458 Score = 318 bits (352), Expect = 7e-82 Identities = 578/846 (68%), Gaps = 0/846 (0%) Strand=Plus/Plus Query 18673 TGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCC 18732 || ||||| ||||| | ||||| |||||||| |||||||| |||| ||||| ||| Sbjct 24025 TGGTATTCTCCAACTTTCTTTTCGAAGAAATTGGTTTTTCCGTCTATCGATATGTTATCC 24084 Query 18733 ATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTAGT 18792 ||||||| || |||||| | || |||| || ||| || ||| || || Sbjct 24085 ATAAAATTGAAGGGATTTCGCGAGTGGTAGATTTCAGCGATTCCCAAATCTGCCAGCAGC 24144 Query 18793 CTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTA 18852 | || || || |||| || ||| ||| | | |||||||| || || || Sbjct 24145 TTGTCAGCCACGAATTCGATGTATTCACACATAAGTCCGCAATTCATGCCGATCAAAGAT 24204 Query 18853 ACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGAT 18912 ||||| || || || |||||||| || ||||| || || || || ||| || || Sbjct 24205 ACAGGCAGGGCTTCGGTAAGAAACTCCTGTTCGATCTTCACGGCATCTCTGATGATGTTC 24264 Query 18913 ACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAATCA 18972 || || || || ||| | | | || |||||||||||||| || || | Sbjct 24265 TTGACCCTCTCCTCTGAAGGCTTCTGCACGACGTGCTTAAACATCAAACACGCGAATTTG 24324 Query 18973 CAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGT 19032 || || | | || || || ||||| || || || || || | ||| ||||||| | Sbjct 24325 CAGTGCATCGCTTCATCCCTGGAGATCAACTCGTTGGAGAAAGTGAGACCGGGCATCAAT 24384 Query 19033 CCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACT 19092 ||| | || || | |||||| || || || || || || ||||| ||||| || ||| Sbjct 24385 CCTTTCTTCTTCAGCCAGAAGATCGAGGCGAAACTGCCGGAGAAGAAAATACCCTCCACT 24444 Query 19093 GCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGT 19152 ||||||||||| || | ||||| || | | || || | | | |||||| || | Sbjct 24445 GCTGCAAAAGCGACGACCCTTTCACCGAATGTCGCTTCTTGACTGGAAATCCAATTTAAC 24504 Query 19153 GCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATA 19212 |||||||||||||||||||| || ||||| || || || || | ||||| ||| | | Sbjct 24505 GCCCAATCAGCCTTCTTTTTCACGCATGGAATAGTTTCAATTGCATTAAGAAGAAAACTT 24564 Query 19213 CGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATA 19272 ||| | |||||| | ||| | |||||||| ||||||||||| ||| || || Sbjct 24565 TTCTCCTTCACATCTTTGATATAAGTGTCTATCAACAAACTGTACATCAGTGAGTGTATG 24624 Query 19273 TTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTA 19332 || || || || ||||| | || || || || |||| || | | |||||||| || Sbjct 24625 TTCTCCATGGCAATCTGCATGCCATAGAAGAATTTTGCCTCAATAACTTGTACTTCTTTA 24684 Query 19333 CAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAAT 19392 | ||||| || |||| |||||||| || || |||||| || ||||||||||| || Sbjct 24685 CTGAATCTCTCTACCAGGTTTTCATTGACAATACCATCAGAGGCAGCAAAAAATGCCAAC 24744 Query 19393 ACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTA 19452 |||| || || |||||||| |||| ||| || | | | | |||||| || || || Sbjct 24745 ACATACTTGATGAAATGTTTCTCATTTGAAGTCATTTTTTCCCAATCTTTGTAGTCCTTC 24804 Query 19453 GATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCAT 19512 || ||||| ||||| | ||| ||||||| || ||||| |||| || |||||| ||||| Sbjct 24805 GACAAATCAACTTCATGAACCTTCCAAAATGAGGCCTCAGCTTGTTCATACATCTTCCAC 24864 Query 19513 ATATCA 19518 || ||| Sbjct 24865 ATGTCA 24870 >seq4241 Length=192509 Score = 279 bits (308), Expect = 6e-70 Identities = 1168/1846 (63%), Gaps = 35/1846 (2%) Strand=Plus/Plus Query 47009 TTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCAT 47068 ||| || ||||| || || | ||| ||||| || ||| |||||||||| |||||||| Sbjct 51670 TTTCGTGCGTAAGTAGTAGAGACCCGTCTTCAATCCTTTCCTCCATCCATGGAAATGCAC 51729 Query 47069 ACTAGTTAATTT-AGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGAT 47127 | || | || || ||| | |||| | || || || ||||| || ||||||| Sbjct 51730 -CGAGGTCATCGCAGTATACGTGGGTTTAGCGATGTGTATGTTAAGGCTCTGGCTCTGAT 51788 Query 47128 CAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATA 47187 | ||||| || || | ||| || ||||| | | | | ||| || | |||||||| | Sbjct 51789 CTATAAAGGCGCCACAATCTGCAGCCATGTTGATCAAAGTCCTCTGCGAGATCTCCCACA 51848 Query 47188 CTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGATTAG---TATTTTGAATAGATCCTC 47244 | |||||||| | || || | ||||| | ||| | ||||| || || || Sbjct 51849 CAGTTTTATACAAACTCTTGATATTATCTGGAATTGTAGGGATGTTTTGGATGGAACCAT 51908 Query 47245 Cgttttctataattttgttttttaattcatttgaccaaagttttcgttcagttaatgttt 47304 ||| | |||| || ||| || | | ||| || | ||||| || | Sbjct 51909 AGTTGGCGATAAGTTGGTTCTTCATCACCGCGTCCCACAGGCCTAGTTCAACTAGATCCT 51968 Query 47305 ttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATAT 47364 | || | |||| |||| | || | |||||||||| | | | |||||||| |||| || | Sbjct 51969 TCAATAAATGATGATTGATAACTGGAAATTCTCCGGCTTGCACTCTACGAGTATAAATGT 52028 Query 47365 TACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAG 47424 ||||||| || ||||| | || || || ||||| |||||||| ||||| ||||| | Sbjct 52029 TACTTGTGTACGGTTCGAAGGACTCGTTGTTTCCTAAAATTTGGGCAGTGCTAGCTGTTG 52088 Query 47425 GCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNN 47484 |||| | ||||| | | ||| || | ||| | || || | Sbjct 52089 GCATAGGTGCAAGAAGGAGAGAATTCCTGATTCCGTGCTTGGCGATTTTTTCCTTTAAGG 52148 Query 47485 GTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTT 47544 ||||||||| || |||| ||| |||||||| | ||| ||||| |||||||| | Sbjct 52149 CGGCCCAATCCCATAGGTCTGTTGGTGTTACATTCCACATATCGTATTGGAGAATTCCCT 52208 Query 47545 TACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAAC 47604 | || |||||| || ||||| ||| ||| || || | | || ||||| |||||| | Sbjct 52209 TGCTGGCCGGAGATCCTTTATAAGTTGAATACGGTCCATCTCTTTCAGCGATTTCACAGC 52268 Query 47605 TTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTT 47664 | | ||| || || | ||| || | || || ||||| | || |||| || ||||| Sbjct 52269 TCGTTTCTAAAGCTCCATAGTAAAGAGTCTCGAATATCTGTACATTTAACTTTTGTGCTT 52328 Query 47665 CTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAA 47724 || ||| || ||| || | ||| ||||| || || | ||| | Sbjct 52329 CTTCGCTTTCGAACGGAATCCTCATCAAGATAAAAGCATCGGCCAAACCCTGTATACCGA 52388 Query 47725 TACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTA 47784 |||||||||| | ||| | |||| || |||||| || | ||||| | ||| | Sbjct 52389 TACCAATTGGACGATGTCTCATATTTGAGTTTCTAGCTTCAGGCACAGGATAGTAGTTGA 52448 Query 47785 TATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAA 47844 | || || || || || ||| | ||| | | ||| | | Sbjct 52449 TGTCGATGATCTTGTTCAGATTTCTAGTAACTAGTTTGGTGAGTTCCTTCAGTTTGATGA 52508 Query 47845 AATCAAACTTGTTATTTA---TAACAAACCTATTAAGTGCTATAGATGCTAGATTACATA 47901 |||| || |||| | | |||||| | |||| || || || |||| |||||| | Sbjct 52509 AATCGAATGATTTATCTGGTTTTACAAACATGTTAACGGCAATTGACGCTAAATTACAGA 52568 Query 47902 CAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGA 47961 | || || | || ||| |||| | |||||| | || || || | ||||| Sbjct 52569 CGGCAGTTTCGTCGGGCGCAGTGTATTCCACTATTTCTGTGCACAGGTTCGAGCTTTTGA 52628 Query 47962 TAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAG 48021 | || |||||||| || || || | ||| || || |||||||| | ||| ||| Sbjct 52629 TTGTCCCCAAATTCTGTTGGTTGCTCTTCGAGTTGCAGGCATCCTTGTACATCATGTAAG 52688 Query 48022 GTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAA 48081 | ||| || || || || || || | |||||| |||||| || Sbjct 52689 GAACACCAACCTCAATTTGCGAGATAACAATTGCGCGCCAAACTTCTCTAGCCGGAAT-- 52746 Query 48082 CAGCTCTAGCTTTATTATCATG----TTCGTATTTAGTATATAACTTCTCAAATTCATCC 48137 | | | | | |||| || | ||||||||| ||| | ||| || || || || Sbjct 52747 CTGTTT--GTTATATTTTCCTTCGGCTTCGTATTTTTCATAGAGCTTTTCGAACTCTTCG 52804 Query 48138 CCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCA 48197 || | | || |||||||| | || ||| ||||||| |||||| | |||| Sbjct 52805 CCCCAGCAGTCCGACAATCCAGGACACTTATGAGGGCACATCAGTGACCAGACACTATCA 52864 Query 48198 TTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTT 48257 | ||| | ||||||| | || |||||||| | || ||| |||||||| | | Sbjct 52865 GCCTCTACGCGTTTCATAAACAAGTCCGGTATCCACAAGGCATAAAACAAATCCCTGGCT 52924 Query 48258 CTTAGTTCTTCATTGCCACTATTCCTTTTAAG-TTCAAGAAAGTCCATTATATCAGCATG 48316 ||| |||||||| || |||||||||| || |||| ||| ||||| || |||||||| Sbjct 52925 CTTTCCTCTTCATTTCCCGTATTCCTTTTCAGATTCACGAAT-TCCATAATGTCAGCATG 52983 Query 48317 CCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATA 48376 ||| || || ||||| | || | || |||| | || || ||||| | | | Sbjct 52984 CCAAGGCTCCAAATACACCGCAACGGAGCCAGGTCTTCTA---CCACCTTGGTTCACGTG 53040 Query 48377 TCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACC---ATT 48433 || || || | ||| | ||| | ||||| || ||||| |||| ||| |||| ||| Sbjct 53041 CCTCGCTGTTTGGTTGAACACTTTCAACATAGGCACAATTCCATCCGATTTACCCCCATT 53100 Query 48434 GGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACC 48493 | | | ||| |||| ||||||||||| ||| ||| || |||||||| Sbjct 53101 GCT---CTTAATCAGTGTTCCCGCTGCTCTTATATTGTGAATGTTAATTCCAATACCACC 53157 Query 48494 TGCCATTTTAG--ATATTAGAGCACACCGTTT--AAGGGTATCATAAATTCCTTCTATAC 48549 || || | || || ||||| | | || | | |||||| || || | Sbjct 53158 AGCAGACTTGGTAATCTT----CACACAATCTGAAACGCATTTATAAATCCCATCAAGTG 53213 Query 48550 TATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAAT 48609 ||| ||| ||| | | || |||||| || || || | ||| || | Sbjct 53214 AATCTTCTGGCATCATCAGTAAAAAACATGAGCTCAACTGTGGTCTAGGAGTGCCAGCGG 53273 Query 48610 TAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAA 48669 ||||| |||||| ||||| | || | || || || | | | ||||| |||| Sbjct 53274 AGAATAACGTTGGACTAGCATGGGTGAAGTACTTTTCAGACATGTAATGGTATGTCTCAA 53333 Query 48670 TAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAG 48729 | |||| | || ||| ||||||||||| || || | ||| ||||||| |||| Sbjct 53334 TTGCAGACTTGATGTCCTCCCCATGTATACCTACAGCCACTCTCATCAACATATGCTGAG 53393 Query 48730 GTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAAC 48789 | || |||||||| |||||||| || ||||| | ||| || || ||||| || || |||| Sbjct 53394 GCCTCTCAACAATCTTGTTATTGATCTTCAACAAATAAGACTTCTCCAAAGTCTTGAAAC 53453 Query 48790 CAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATTGATGAATT 48835 |||| || |||||||| || ||| ||||| | ||| | ||||| Sbjct 53454 CAAAGTAATTGTATGAGAAATCGCGATCATACACAATACAAGAATT 53499 >seq4643 Length=985661 Score = 273 bits (302), Expect = 2e-68 Identities = 872/1357 (64%), Gaps = 13/1357 (1%) Strand=Plus/Minus Query 47488 TCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTAC 47547 |||||| ||| | ||||| ||| |||||||| | || ||||| |||||||| |||| Sbjct 334057 TCCAATTCCATAAATCTGTTGGTGTTACATTCCACATATTGTATTGGAGAATTCCCTTAC 333998 Query 47548 TTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTG 47607 | |||||| || | ||||| || || || | | || || | |||||| || | Sbjct 333997 TGGCCGGAGATCCTTCGTATGTCGAGTATGGTCCATCTCTTTCGGCAATTTCACAGCTGG 333938 Query 47608 CTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTG 47667 | || || || | |||||| | || || ||||| | || || | || ||| ||| Sbjct 333937 CCTCTAAAGCTCCATAATAAAGAGTCTCGAATATCTGTACATTAACCTTTTGTGCGTCTT 333878 Query 47668 ATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATAC 47727 ||| || ||| || | ||| |||||||| || | |||||||| Sbjct 333877 CGCTTTCGAACGGAATCCTCATCAAGATAAAAGCATCGGCCAATCCCTGTATACCAATAC 333818 Query 47728 CAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATAT 47787 ||||||| | ||| | |||| || |||||| |||| ||||| | ||| || | Sbjct 333817 CAATTGGACGATGTCTCATATTTGAGTTTCTAGCTTCAGGTACAGGATAATAGTTGATGT 333758 Query 47788 CTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAAT 47847 | || || || || ||| || ||| ||||||| | |||| Sbjct 333757 CGATGATCTTGTTCAGATTTCTAGTAACTAGTTTGGTAAGTTCCTTTAATTTGATGAAAT 333698 Query 47848 CAAACTTGTTATTTA---TAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAG 47904 | || |||| | | |||||| |||||| || || ||||| | |||||| || | Sbjct 333697 CGAATGATTTATCTGGTTTTACAAACATATTAACGGCAATGGATGCCAAATTACAGACGG 333638 Query 47905 CTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAG 47964 | || | || |||||||| |||||||| | || || || | ||||| | Sbjct 333637 CAGTTTCGTCGGGCGCAGTATATTCCATTATTTCTGTGCACAGGTTCGAGCTCTTGATTG 333578 Query 47965 TACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTG 48024 | |||||||| || || ||| | ||| || || |||||||| |||||| |||| Sbjct 333577 TGCCCAAATTCTGTTGGTTACTCTTTGAGTTGCAGGCATCCTTGTACAGCATATAAGGAA 333518 Query 48025 TTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAG 48084 ||| || || || || || || | |||||| |||||| ||| | | Sbjct 333517 CACCAACCTCAATTTGCGAGATAACAATTGCGCGCCAAACTTCTCTAGCCGGTAT--CTG 333460 Query 48085 CTC--TAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATA 48142 | || |||| || ||||||||| ||| | || || || || || || | Sbjct 333459 TTTATTATATTTACCTTCGGCTTCGTATTTTTCATAGAGTTTTTCGAACTCTTCGCCCCA 333400 Query 48143 CACATTATC-TAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTT 48201 ||| | ||| || ||||| | || ||| ||||||| |||||| | |||| | | Sbjct 333399 -ACAGTCCGATAATCCTGGACACTTATGAGGGCACATCAGTGACCAGACAGAATCAGTGT 333341 Query 48202 TTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTA 48261 ||| | ||||||||| ||||||||||| | || ||| |||||||| | |||| Sbjct 333340 CTACACGTTTCATAAATAAGTCTGGTATCCACAAGGCATAAAACAAATCCCTGGCTCTTT 333281 Query 48262 GTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATG 48321 |||||||| || ||||| |||| || | || || ||||| ||||| |||||||| | Sbjct 333280 CCTCTTCATTCCCTGTATTCTTTTTTAGATTCAGGAATTCCATAATATCTGCATGCCACG 333221 Query 48322 GTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGG 48381 | || ||||| | || | |||| |||||| || || ||||| | | || || | Sbjct 333220 GCTCCAAATACACAGCAACAGCACCAGGTCGTCTA---CCACCTTGGTTCACGTACCTCG 333164 Query 48382 CAGTATTGTTATAAACTCTTAAC-ATTGGGACAATACCATTTGATATACCATTGGTTCCC 48440 | |||||||| | ||| | ||| || | | ||||| ||| |||| || || Sbjct 333163 CTGTATTGTTGAACACTTTGAACCATCCGAATTGAACCATCCGATTTACCGCCTGTACCA 333104 Query 48441 GAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATT 48500 ||| |||| |||||||||||| ||| ||| || || ||||| || Sbjct 333103 ATAATTGGTGTTCCTGCTGCTCTTATATTATGAATATTAATTCCAATGCCACCAGCAGAC 333044 Query 48501 TTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATC 48560 || || || | ||||| || | | |||||| || | || ||| ||| | Sbjct 333043 TTTGAAATCATTGCACAATCAGAAATGCATTTATAAATCCCAACAATTGAATCTTCTGGC 332984 Query 48561 ATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTT 48620 || | |||| |||||| || || || | | ||| |||| | ||||||||| Sbjct 332983 ATCATCAATAAAAAACATGAGCTCAACTGTGGCTTATGAGTGCCTGCAGAGAATAATGTT 332924 Query 48621 GGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCT 48680 ||| ||||| | || | || || || | | | ||||| ||||| |||| | Sbjct 332923 GGACTAGCATGGGTGAAATACTTTTCAGACATATAATGGTATGTCTCAATTGCAGACTTA 332864 Query 48681 ATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACA 48740 |||||| |||||||| | || || | ||| | ||| | |||||||| |||||| Sbjct 332863 ATATCCTCCCCGTGTATACCCACAGCCACTCTCATCAGCATGTGCTGAGGTCTCTCAACA 332804 Query 48741 ATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTG 48800 | |||||||| || || || | |||||| || ||||| || || |||||||| || ||| Sbjct 332803 GTCTTGTTATTAATCTTTAACAAATATGACTTCTCCAAAGTCTTGAAACCAAAGTAATTG 332744 Query 48801 TATGAAAAGTCGTTATCATTAATAATTGATGAATTTA 48837 |||||||| || ||||| || || ||||||||| Sbjct 332743 TATGAAAAATCCCGATCATATATTATACATGAATTTA 332707 >seq1784 Length=48699 Score = 86.0 bits (94), Expect = 7e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 48614 TAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAAC 48673 |||||||||| |||||| | || |||| | || | | |||||| ||||| | Sbjct 36459 TAATGTTGGACTAGCATGACTGAAATATTTTTTAGACTTGTACTGATATGTCTCAATTGC 36518 Query 48674 AGAATCTATATCCCATTGATGTATACCTATAGATACAC-GCATTAACATATATTGAGGTC 48732 ||| | |||||| ||||||||||| | ||| || || ||||||| ||||| | Sbjct 36519 AGACTTGATATCCTCCCTATGTATACCTACA-ATAAACTTTATCAACATATGCTGAGGCC 36577 Query 48733 TTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAA 48792 |||||||| ||| |||| || |||| | |||||| || ||||| || |||||| || Sbjct 36578 GCTCAACAATCTTGATATTAATCTTCATTAAATATGAGTTCTCCAAAGTCGTAAAACTAA 36637 Query 48793 AATAGTTGTATGAAAAGTC 48811 | | | |||||| || || Sbjct 36638 AGAAATCGTATGAGAAATC 36656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562076127426000