Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq830 187 2e-42 seq429 95.1 1e-14 >seq830 Length=194395 Score = 187 bits (206), Expect = 2e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101242 TCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGC 101301 |||||| | ||||||||||| || |||||||| ||||| || || || ||||| || | Sbjct 122612 TCCTCCACGCAAACGTAAAACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCAGA 122671 Query 101302 GATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGG 101361 | ||||||| |||| ||||||||||| || ||||| ||||||||||| ||||| || || Sbjct 122672 CAGAGTTCTGCCATCTTCCAATTGCTTGCCAGCAAAAATCAAACGCTGCTGATCTGGTGG 122731 Query 101362 AATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 ||| ||||| ||||| || ||||| ||| || | || | || ||||||| |||||| Sbjct 122732 AATTCCTTCCTTATCCTGGATTTTGGCTTTAACGTTCTCGATTGTATCAGACGGTTCCAC 122791 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||||| || || || || ||||||||||| || |||||||| Sbjct 122792 CTCCAAAGTGATAGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 122839 Score = 170 bits (188), Expect = 2e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || ||||||||||| ||||| ||||| || ||||| || | | ||| ||| | Sbjct 124466 ACGCAATACCAAATGAAGGGTGGATTCCTTTTGAATGTTGTAGTCCGACAGAGTCCTGCC 124525 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||||||||||||| || || |||||||| |||||||| || || || ||||| || Sbjct 124526 ATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTT 124585 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| ||||| ||| ||| |||| | |||||||| | ||| ||||| | || | Sbjct 124586 GTCTTGGATTTTGGCTTTGACATTTTCAATTGTGTCAGATGGTTCAACTTCCAAGGTAAT 124645 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 ||||| || || || ||||| ||||| |||||||| | | |||||| Sbjct 124646 GGTTTTTCCAGTCAAGGTTTTAACAAAGATCTGCATACCTCCACGAAGA 124694 Score = 161 bits (178), Expect = 8e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| || ||||||||||| |||||||| ||||| || ||||| || | Sbjct 124683 CCTCCACGAAGACGCAATACTAAATGAAGTGTAGATTCCTTTTGGATGTTGTAGTCCGAC 124742 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| ||| |||| |||||||| ||||| || || |||||||| || ||||| || || Sbjct 124743 AGAGTCCTGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGTGGG 124802 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || ||||| |||||||| || || ||| |||| | || ||||| | || || Sbjct 124803 ATTCCCTCTTTGTCTTGAATCTTAGCCTTCACATTTTCAATGGTATCAGAGGGCTCAACC 124862 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 124863 TCCAAAGTGATGGTTTTACCAGTTAAGGTTTTCACAAAGATCTGCAT 124909 Score = 158 bits (174), Expect = 1e-33 Identities = 180/242 (74%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| |||| | ||| ||||| ||||| | |||||||| ||||| ||||||||||| | Sbjct 123067 TTCCGCCTCGAAGACGCAAAACCAAATGTAATGTAGATTCCTTTTGGATATTGTAATCAG 123126 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || ||| |||| ||||| || |||||||| || |||||||| || ||||| || | Sbjct 123127 ACAAGGTCCTGCCATCCTCCAACTGTTTACCTGCGAAGATCAAACGTTGCTGATCTGGAG 123186 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| ||||| || ||||||||||| || || | || | || || || | ||| | Sbjct 123187 GAATACCTTCCTTGTCTTGAATTTTGGCCTTAACGTTCTCAATTGTATCGGATGGTTCAA 123246 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAA 101480 |||| | |||| ||||| || || || ||||||||||| || ||||| | | |||| Sbjct 123247 CTTCTAAGGTGATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCATACCTCCACGAA 123306 Query 101481 GA 101482 || Sbjct 123307 GA 123308 Score = 156 bits (172), Expect = 3e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 |||||| |||| ||| ||||| || || || || || || ||||| | | |||||| | Sbjct 122852 ACGTAACACTAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCCGACAAAGTTCTACC 122911 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||||||||||||| ||||| |||||||| || || || || ||||| |||||||| Sbjct 122912 ATCCTCCAATTGCTTACCCGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTT 122971 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||||||||| ||||| | || | ||||| || | ||||| || | ||||| Sbjct 122972 GTCTTGAATTTTAGCCTTTACGTTCTCAATTGTGTCCGATGGCTCCACCTCCAAAGTGAT 123031 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || |||||||| || || |||||||| Sbjct 123032 AGTCTTTCCCGTCAAAGTTTTCACGAAAATCTGCAT 123067 Score = 156 bits (172), Expect = 3e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || ||||||||||||||||| ||||| || ||||| || | | ||| ||| | Sbjct 124010 ACGCAATACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGACAGAGTCCTGCC 124069 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||||||| ||||| || || |||||||| || ||||| || || || ||||| || Sbjct 124070 ATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCCTT 124129 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| ||||| || || |||| | |||||||| | ||| ||||| | ||| | Sbjct 124130 GTCTTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCCAAAGTAAT 124189 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 ||||| || || || ||||| || || |||||||| | | |||||| Sbjct 124190 GGTTTTTCCAGTCAATGTTTTAACGAAGATCTGCATACCTCCACGAAGA 124238 Score = 140 bits (154), Expect = 3e-28 Identities = 175/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| || || ||||| || || ||||| || || ||||||||||| | Sbjct 123525 CCTCCACGAAGACGCAATACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAATCAGAC 123584 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| ||| |||| |||||||| ||||| || || || ||||| || ||||| || || Sbjct 123585 AGAGTCCTGCCATCTTCCAATTGTTTACCGGCGAAGATTAAACGTTGCTGATCTGGGGGG 123644 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| ||||| || || |||| | || || || | ||| ||| Sbjct 123645 ATTCCTTCCTTGTCTTGGATTTTAGCCTTGACGTTTTCAATTGTATCGGATGGTTCAACT 123704 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 || | ||||| ||||| || || || ||||| || || |||||||| | | |||||| Sbjct 123705 TCCAAAGTGATAGTTTTTCCAGTCAAGGTTTTAACGAAGATCTGCATACCTCCACGAAGA 123764 Score = 107 bits (118), Expect = 2e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 101288 ATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGC 101347 ||||||||||| | | ||| ||| |||| |||||||| || || || || || ||||| Sbjct 123816 ATATTGTAATCAGACAGAGTCCTGCCATCTTCCAATTGTTTTCCGGCGAAGATTAAACGT 123875 Query 101348 TGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTG 101407 || ||||| || || || ||||| || ||||| ||||| || || | || | || Sbjct 123876 TGCTGATCTGGGGGGATTCCTTCCTTGTCTTGGATTTTGGCCTTAACGTTCTCAATTGTA 123935 Query 101408 TCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGC 101467 || || | ||| ||||| | ||||| ||||| || || || ||||| || || |||||| Sbjct 123936 TCGGATGGTTCAACTTCTAAAGTGATGGTTTTTCCAGTCAATGTTTTAACGAAGATCTGC 123995 Query 101468 AT 101469 || Sbjct 123996 AT 123997 >seq429 Length=41586 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 || ||||| || || || ||||| || | | ||| | |||| || | ||||||||| Sbjct 1140 GTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTACGTCCATCCTCGAGTTGCTTACCG 1199 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 || || || | ||| || ||||| || ||||| || || || ||||| || || || Sbjct 1200 GCGAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTC 1259 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 ||| | || | || || || | || || ||||| |||| || || || || |||||| Sbjct 1260 ACATTCTCGATGGTATCGGAAGGCTCGACCTCAAGGGTGATGGTCTTACCCGTCAAAGTT 1319 Query 101453 TTTACAAATATCTGCAT 101469 ||||| || |||||||| Sbjct 1320 TTTACGAAAATCTGCAT 1336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396255942160050