Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq2843 93.3 6e-14 >seq2843 Length=88654 Score = 93.3 bits (102), Expect = 6e-14 Identities = 185/274 (68%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 197052 CTTACAAATGGATTCGTACATCTGGTTGTCGGGATTGTAACAGGCGAGTAAGAAAGCGCC 197111 ||| |||||| || ||| | ||| |||| | ||| || || | || ||| |||| Sbjct 56646 CTTGCAAATGCTTTGGTATTCTTCGTTATCGGCGTCGTAGCAAGCCAATAGAAAACCGCC 56587 Query 197112 GTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCTCCGATAACCACCAGATCCAGAGT 197171 ||| ||||| || | ||||| || | | || || || || || | ||| || || Sbjct 56586 GTAAGTTCCAGTCCGTTTTCCTTTACCAATATATCCACCAATGACGACTACATCTAGCGT 56527 Query 197172 GTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGC 197231 || | || || |||| |||||||||||||| || | ||| | | || |||||||| Sbjct 56526 ATCTCCAACGCCCTCCAGGTAATCTTTCTTCAACTTTAACCAATTCCGCGACCTCTTGGC 56467 Query 197232 AATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATCATCAATCCCTCGCAATCTTCCTT 197291 ||| || || || || | ||||||| ||||| | |||||| || || |||| | || Sbjct 56466 AATTTCATATGTGGCATCCTCGTCCAGCGTCTTTACCATCAAACCTTCACAATTACCTTT 56407 Query 197292 CACGGCCTTGTTCATGAAAGTTTGAATGTCTTCC 197325 ||| || | || ||| ||||| |||||| Sbjct 56406 GACGCTCTCATCCAAGAACTCTTGAACCTCTTCC 56373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676690265092000