Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4450 210 4e-49 >seq4450 Length=177458 Score = 210 bits (232), Expect = 4e-49 Identities = 502/749 (67%), Gaps = 19/749 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || ||| | || || ||||| || || || || || | ||| ||||| || Sbjct 24024 CTGGTATTCTCCAACTTTCTTTTCGAAGAAATTGGTTTTTCCGTCTATCGATATGTTATC 24083 Query 47899 CATGAAGAGGAAGGGGTT--GGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGC 47956 ||| || |||||| || | | ||| || | | | | | |||| | | ||||| Sbjct 24084 CATAAAATTGAAGGGATTTCGCGAGTGGTAGATTTCAGCG--ATTCCCAAATCTGCCAGC 24141 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 || | || || ||| | |||||||||| |||| || | |||||||| || | Sbjct 24142 AGCTTGTCAGCCACGAATTCGATGTATTCACACATAAGTCCGCAATTCATGCCGATCAAA 24201 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 || || |||| || | || |||||||||| || |||| |||||| || | | || Sbjct 24202 GATACAGGCAGGGCTTCGGTAAGAAACTCCTGTTCGATCTTCACGGCATCTCTGATGATG 24261 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGC-AGGTGCTTGGCATAGAGCATGCAGGC 48135 | ||| || | |||||| || || | || | | |||||| | | | || || || Sbjct 24262 TTCTTGACCCTCTCCTCTGAAGGCTTCT-GCACGACGTGCTT---AAACATCAAACACGC 24317 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 || | | ||||| |||| |||| | ||| | | |||||||||| |||||| || Sbjct 24318 GAATTTGCAGTGCATCGCTTCATCCCTGGAGATCAACTCGTTGGAGAAAGTGAGACCGGG 24377 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||| | || ||| || |||||||| || | |||||| ||| |||||||| || || Sbjct 24378 CATCAATCCTTTCTTCTTCAGCCAGAAGATCGAGGCGAAACTGCCGGAGAAGAAAATACC 24437 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCT-GAGATCC 48314 ||||||||| || || ||| || ||| || ||||| | || |||||| || || |||| Sbjct 24438 CTCCACTGCTGCAAAAGCGACGACCCTTTCACCGAATGTCGC-TTCTTGACTGGAAATCC 24496 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC--CCGGAA 48372 | | |||||| || |||||||| || | |||||| || || || || || ||| Sbjct 24497 AATTTAACGCCCAATCAGCCTTCTTTTTCACGCATGGAATAGTTTCAATTGCATTAAGAA 24556 Query 48373 G--AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430 | | ||| | | ||| | || | ||| || | || | ||||||| Sbjct 24557 GAAAACTTTTCTCCTTCA----CATCTTTGATATAAGTGTCTATCAACAAACTGTACATC 24612 Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 ||||| | ||||| || || ||||| | || |||||| | ||||||| || Sbjct 24613 AGTGAGTGTATGTTCTCCATGGCAATCTGCATGCCATAGAAGAATTTTGCCTCAATAACT 24672 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || |||||| | ||||||||| | ||| || |||||||| || ||||| || |||||| Sbjct 24673 TGTACTTCTTTACTGAATCTCTCTACCAGGTTTTCATTGACAATACCATCAGAGGCAGCA 24732 Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATG 48579 || || || | |||| || | |||||| Sbjct 24733 AAAAATGCCAACACATACTTGATGAAATG 24761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931478654656000