Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq809 132 3e-25 seq830 127 1e-23 seq3057 104 2e-16 seq435 100 2e-15 seq429 91.5 1e-12 seq1217 87.8 1e-11 seq2783 86.0 4e-11 >seq809 Length=60095 Score = 132 bits (146), Expect = 3e-25 Identities = 261/379 (69%), Gaps = 8/379 (2%) Strand=Plus/Minus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTT-ATCAGGTCA 475851 || || ||||| ||||| || || || ||||| ||||||| ||| ||||| ||| || | Sbjct 7531 AACCCAGATGAGGCTGTCGCCTACGGCGCTGCCGTCCAAGGAGCCATTTTGATC-GGAGA 7473 Query 475852 ATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCT 475911 || | ||| | | | || | | || || || |||| ||||| || ||| | Sbjct 7472 TACAAGCTCCAAAATCCAAGACGTTCTCTTGGTGGATGTTGCTCCTCTTTCTTTGGGTAT 7413 Query 475912 TGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAA 475971 ||||| | |||||| ||||||| || | |||| || || | || || ||||| Sbjct 7412 CGAAACCGCTGGAGGAGTTATGACCAAAATCGTTGAGAGGAACTCGAGGATTCCTTGCAA 7353 Query 475972 AAA--ATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 | | |||| || | | ||||| || ||||||||| | | || ||||||||| || Sbjct 7352 GCAGCAACAAACGT--TCACAACTTACTCCGATAATCAATCTGCGGTTACCATCCAAGTC 7295 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAA 476089 || ||||| ||||| | |||||||| || ||| | ||||| || || |||| Sbjct 7294 TTCGAAGGCGAAAGGGCGATGACTAAAGACAACAACCTCTTGGGAACCTTCAA-CTTGTG 7236 Query 476090 -GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGC 476148 || ||||| || || || |||||||| || |||| ||||||||||| ||| | || || Sbjct 7235 CGGAATTCCGCCAGCACCGAGAGGAGTCCCGAAAATCGAAGTTACTTTCGATCTGGACGC 7176 Query 476149 AAATGGTATTCTTAATGTT 476167 || || || ||||| ||| Sbjct 7175 TAACGGCATCCTTAACGTT 7157 >seq830 Length=194395 Score = 127 bits (140), Expect = 1e-23 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| | ||| | |||||| || ||| || || || || || | ||||| Sbjct 124461 CGAAGACGCAATACCAAATGAAGGGTGGATTCCTTTTGAATGTTGTAGTCCGACAGAGTC 124520 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||| | |||||| ||||| || || | |||||||||||| || || |||||| Sbjct 124521 CTGCCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCT 124580 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 ||||||||||| || || ||||||| |||||| || |||| || | || || ||| Sbjct 124581 TCCTTGTCTTGGATTTTGGCTTTGACATTTTCAATTGTGTCAGATGGTTCAACTTCCAA- 124639 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| ||||| || || | || ||||| || || || Sbjct 124640 GGTAATGGTTTTTCCAGTCAAGGTTTTAACAAAGATCTG 124678 Score = 123 bits (136), Expect = 2e-22 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| | ||| | ||| || ||| ||| || | || || || | ||||| Sbjct 124232 ACGAAGACGCAATACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGACAGAGT 124291 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| |||||| | ||| || |||||||| || | |||||| ||||| ||||||||||| Sbjct 124292 CCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCC 124351 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||||||| || || || || |||||| || |||| || | || || ||| Sbjct 124352 TTCCTTGTCTTGGATTTTGGCCTTTACGTTTTCAATTGTGTCAGATGGTTCAACTTCCAA 124411 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||||||| || || | || |||||||| || || Sbjct 124412 -GGTAATAGTTTTTCCAGTCAAGGTTTTAACGAAGATCTG 124450 Score = 114 bits (126), Expect = 8e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| | ||| | |||||| ||| ||| || | || || || | ||||| Sbjct 124004 ACGAAGACGCAATACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGACAGAGT 124063 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| |||||| | ||| || ||||| || || | |||||| ||||| ||||| ||||| Sbjct 124064 CCTGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCC 124123 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||||||| || || ||||| |||||| || |||| || | || || ||| Sbjct 124124 TTCCTTGTCTTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCCAA 124183 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| ||||| || || | || |||||||| || || Sbjct 124184 -AGTAATGGTTTTTCCAGTCAATGTTTTAACGAAGATCTG 124222 Score = 111 bits (122), Expect = 1e-18 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| | ||| | ||| || || ||| || | ||| ||||||| ||||| Sbjct 123530 ACGAAGACGCAATACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAATCAGACAGAGT 123589 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| |||||| | ||| || || || || || | |||||| ||||| || || ||||| Sbjct 123590 CCTGCCATCTTCCAATTGTTTACCGGCGAAGATTAAACGTTGCTGATCTGGGGGGATTCC 123649 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||||||| || || ||||| |||||| ||||| | || | || || ||| Sbjct 123650 TTCCTTGTCTTGGATTTTAGCCTTGACGTTTTCAATTGTATCGGATGGTTCAACTTCCAA 123709 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || |||||||| || || | || |||||||| || || Sbjct 123710 -AGTGATAGTTTTTCCAGTCAAGGTTTTAACGAAGATCTG 123748 Score = 111 bits (122), Expect = 1e-18 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| | ||| | |||||||||| ||| || | || || || | ||||| Sbjct 124688 ACGAAGACGCAATACTAAATGAAGTGTAGATTCCTTTTGGATGTTGTAGTCCGACAGAGT 124747 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| |||||| | ||| || ||||| || || | |||||| |||||||| || ||||| Sbjct 124748 CCTGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGTGGGATTCC 124807 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTG-TGAAGTTTCAA 480729 || |||||||||||||| || ||| |||||| ||||||| | | | || | ||| Sbjct 124808 CTCTTTGTCTTGAATCTTAGCCTTCACATTTTCAATGGTATCAGAGGGCTCAACCTCCAA 124867 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || |||||||| || | || || || || || || Sbjct 124868 -AGTGATGGTTTTACCAGTTAAGGTTTTCACAAAGATCTG 124906 Score = 102 bits (112), Expect = 5e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| | || | ||| || || ||| || | || || |||| ||||| Sbjct 123302 ACGAAGACGCAAAACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGAGT 123361 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| |||||| | || || || |||||||| | |||||| ||||| || || || || Sbjct 123362 CCTGCCATCTTCCAACTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGGGGGATCCC 123421 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||||||||||||| |||||| ||||||||| |||| | | || | ||| Sbjct 123422 TTCCTTGTCTTGAATCTTAGCCTTGACATTTTCAATAGTGTCAGAAGGCTCAACCTCCAA 123481 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || |||||||| || | || || || ||||| || Sbjct 123482 -AGTGATGGTTTTACCAGTTAAGGTTTTCACAAAAATCTG 123520 Score = 89.7 bits (98), Expect = 3e-12 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| ||||||| ||||| ||| |||||| | ||| ||||| || || || | |||||| Sbjct 123818 ATTGTAATCAGACAGAGTCCTGCCATCTTCCAATTGTTTTCCGGCGAAGATTAAACGTTG 123877 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||| || || ||||||||||||||||| || || || || ||||| ||||| Sbjct 123878 CTGATCTGGGGGGATTCCTTCCTTGTCTTGGATTTTGGCCTTAACGTTCTCAATTGTATC 123937 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || || ||||| || || | || |||||||| || || Sbjct 123938 GGATGGTTCAACTTCTAAAGTGATGGTTTTTCCAGTCAATGTTTTAACGAAGATCTG 123994 Score = 87.8 bits (96), Expect = 1e-11 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| ||||||||| |||||| | |||||| ||||||||||| | ||| || Sbjct 122661 TTGTAGTCAGACAGAGTTCTGCCATCTTCCAATTGCTTGCCAGCAAAAATCAAACGCTGC 122720 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 ||||| || |||||||||||||| || || || || ||| || || || |||||| Sbjct 122721 TGATCTGGTGGAATTCCTTCCTTATCCTGGATTTTGGCTTTAACGTTCTCGATTGTATCA 122780 Query 480714 G 480714 | Sbjct 122781 G 122781 Score = 87.8 bits (96), Expect = 1e-11 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| | || | ||| | |||| ||| || | ||| ||||||| | || Sbjct 123075 CGAAGACGCAAAACCAAATGTAATGTAGATTCCTTTTGGATATTGTAATCAGACAAGGTC 123134 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| ||| || | || || || || || || | |||||| ||||| |||||||| ||| Sbjct 123135 CTGCCATCCTCCAACTGTTTACCTGCGAAGATCAAACGTTGCTGATCTGGAGGAATACCT 123194 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 |||||||||||||| || || || ||||| ||||| | || | ||| | | Sbjct 123195 TCCTTGTCTTGAATTTTGGCCTTAACGTTCTCAATTGTATCGGATGGTTCAACTTCTAAG 123254 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| || || | || || || |||||||| Sbjct 123255 GTGATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTG 123292 >seq3057 Length=41470 Score = 104 bits (114), Expect = 2e-16 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 321759 GTAACAATTTCATCAAATGTAAGATTTTTTGCAATAATTAATGGTAAACCAACTTCATTC 321818 |||||||||||| || |||||||| | |||||| || || | || |||| || Sbjct 2626 GTAACAATTTCAGGGAACGTAAGATTCTGAGCAATACTTCTAGGGACGCCTACTTGATCG 2567 Query 321819 AGTGCAATATTTGGATCAGATGTGATAACTGTACGACCAGACATATCAACACGTTTACCC 321878 | | || ||||||||| | |||||| || ||||| | || | ||| ||||| || ||| Sbjct 2566 ATTCGAAGATTTGGATCTGGTGTGATTACAGTACGTGCGGAGAAATCCACACGCTTTCCC 2507 Query 321879 ATAAGATTTCCTCTAATACGACCTTCTTTTCC 321910 ||||| ||||| | |||||| ||||||||||| Sbjct 2506 ATAAGGTTTCCACGAATACGTCCTTCTTTTCC 2475 >seq435 Length=216619 Score = 100 bits (110), Expect = 2e-15 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 627768 ACCATCACGTCCTGCTCTACCTATTTCTTGATAATAACCTTCGATATTTTTAGGTGCGCC 627827 |||||| | ||| ||||| || | ||| ||||| |||| ||| | || ||| | ||||| Sbjct 209994 ACCATCTCTTCCCGCTCTTCCAACTTCCTGATAGTAACTTTCTAAATCTTTGGAAGCGCC 209935 Query 627828 ATAATGTATTACTGCTCTCACATCTGATTTATTAATACCCATTCCAAATGCAATTGTTGC 627887 |||||||| | |||||||| | ||||| ||||||||||| || |||| || || Sbjct 209934 GTAATGTATAATATTCCTCACATCCGGTTTATCTATACCCATTCCGAAAGCAACCGTGGC 209875 Query 627888 AACCATTATATTT-ACTTTTCCATTAACAAAATTTTTATGAGCTT--TTGATTTGACTTT 627944 | || || |||| || || | |||||||| |||| || | || || ||| | | Sbjct 209874 TA-CAATACATTTCACCTTGTCTTTAACAAAGTTTTCGTGCGTTTCCTTCCTTT-TCGGT 209817 Query 627945 AGAATCAAGATCTCCATGATACATTCCACATT 627976 ||| || | | | |||||||||||||||||| Sbjct 209816 AGACTC-ATACCAGCATGATACATTCCACATT 209786 >seq429 Length=41586 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || |||||||| || || || ||||||||||| ||||| || |||||||| ||||| Sbjct 1181 ATCCTCGAGTTGCTTACCGGCGAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCCTT 1240 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 |||||| ||||| || ||| || || ||||| | | |||||||| || Sbjct 1241 GTCTTGGATCTTGGCCTTCACATTCTCGATGGTATCGGAAGGCTCGACCTCAAGGGTGAT 1300 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || | ||| || |||||||| || Sbjct 1301 GGTCTTACCCGTCAAAGTTTTTACGAAAATCTG 1333 >seq1217 Length=60648 Score = 87.8 bits (96), Expect = 1e-11 Identities = 156/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 474653 TTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCA 474712 ||| | || || |||| || | |||||||| | ||| ||||| ||||||| | Sbjct 20078 TTTGCCCCCGAGGAAATCTCCGCTATGGTTTTGGGCAAGATGAAGGAAACCGCTGAAGCC 20137 Query 474713 TATCTTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTC 474771 ||| |||| ||||||| | ||| | || || | ||||| || || || || || ||| | Sbjct 20138 TAT-TTGGGCAAGAAGGTCACTCACGCCGTCGTCACTGTACCCGCTTACTTCAACGATGC 20196 Query 474772 TCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTAT 474831 |||||||||||| || || ||||| || || || ||| | || || | | || || Sbjct 20197 TCAACGTCAAGCCACCAAGGATGCTGGTGTCATCGCCGGTTTGAACGTGATGAGGATCAT 20256 Query 474832 TAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || ||||| || || || || ||||||| || | || ||||| Sbjct 20257 CAACGAACCCACCGCCGCTGCTATTGCTTACGGCTTGGACAAGAA 20301 >seq2783 Length=54131 Score = 86.0 bits (94), Expect = 4e-11 Identities = 107/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 299114 GAAGAAGAGATTAAAAAAGCTTATAAAAAATTAGCTATGAAATATCATCCTGACAGAAAT 299173 || || ||||||||||| ||||||| |||||||| ||||||||||||| |||| |||| Sbjct 22399 GATGAGGAGATTAAAAAGGCTTATAGGAAATTAGCATTGAAATATCATCCGGACAAAAAT 22340 Query 299174 AAAAGTCCTGAAGCGGAAGAAAAGTTTaaaaaaaTAAGTCATGCTTATAGTATTCTTTCA 299233 || || | || || |||||||||||| || || | |||||| |||| || Sbjct 22339 AAGTCACCAGGTGCCGATGAAAAGTTTAAAGAAGTAGCCGAAGCTTATGAAGTTCTATCG 22280 Query 299234 GATCCAACCAAAAAAGAAGTATATG 299258 ||| || ||| |||||| | ||| Sbjct 22279 GAT--AA--AAAGAAGAAGGACATG 22259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267979738938200