Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2986 154 1e-32 seq830 82.4 6e-11 >seq2986 Length=174439 Score = 154 bits (170), Expect = 1e-32 Identities = 211/295 (72%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 34355 ACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGA 34414 |||| | ||| || || || |||| || || || || || ||||| || ||||| | Sbjct 105114 ACTTTCTGATAAATCCGTCGAGCAAATCTTGCAATTTGCTGGCATCGTGTGAACCGTTCA 105055 Query 34415 CGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGT 34474 | |||||||| ||||| ||| | || | |||||||| || |||| ||||||||| |||| Sbjct 105054 CAATGAATCGCTCGTTCTTGAAGTCAAATTGCGTTTGGGCTCCCAACTCGCACCCAAAGT 104995 Query 34475 ACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGA 34534 | || || || || ||| || | | | || || || | |||| ||| ||||| | Sbjct 104994 ATTTAGTGGGATATGTGGGAGGCCTGCTCAAAGCTTTAGCCACCTCGGCCATATTGACAA 104935 Query 34535 TGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGT 34594 | ||||| |||||||| ||||| || || || ||||| || ||| | |||||||||| Sbjct 104934 TTACAGTTTTGATGCCATTGCCTTTGCCCTCCACCTTCGCCTGGATTCTTGGCATTTTGT 104875 Query 34595 AGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGC 34649 |||| |||||| | || ||| || | ||| ||||| || | ||||| |||| Sbjct 104874 AGCGATAGAACACATCGCTCACGTTCCTGTTTACGTTGACGCTGCCCATTTTGGC 104820 >seq830 Length=194395 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || || || |||||||| || || || || || || | || |||||| Sbjct 123068 AATGCAGATTTTCGTGAAAACTTTGACGGGAAAGACTATCACTTTGGAGGTGGAGCCATC 123009 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | ||||| || ||| ||||||||||| | || || || Sbjct 123008 GGACACAATTGAGAACGTAAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGACCA 122949 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | | |||| ||||||||| || ||||||||| ||||| || ||||||| || Sbjct 122948 GCAACGTTTGATTTTTGCGGGTAAGCAATTGGAGGATGGTAGAACTTTGTCGGATTATAA 122889 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| || || || || | || | |||||| | ||||| || || Sbjct 122888 CATTCAGAAGGAGTCCACCCTCCATCTAGTGTTACGTCTGCGTGGTGG 122841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412818203492450