Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq429 120 2e-22 seq1314 116 2e-21 seq830 111 1e-19 >seq429 Length=41586 Score = 120 bits (132), Expect = 2e-22 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| |||||||| ||||| |||||||| || | || |||| Sbjct 1125 AGGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTACGTCCATCC 1184 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| ||||||||||| || |||||||| ||| | || | ||||||||||| Sbjct 1185 TCGAGTTGCTTACCGGCGAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCCTTGTCT 1244 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || || | || | |||||| |||| ||| |||| Sbjct 1245 TGGATCTTGGCCTTCAC--ATTCTCGATGGTATCGGAAGGCTCGACCTCAAGGGTGATGG 1302 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||||| | || ||||| || |||||||| Sbjct 1303 TCTTACCCGTCAAAGTTTTTACGAAAATCTGCAT 1336 >seq1314 Length=49468 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||| | ||| ||||||||| ||||| ||||| || ||| |||| |||| || Sbjct 22026 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCATCCTCG 22085 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| ||||||||||||| |||||||| ||| | || | ||||| ||||| | Sbjct 22086 AGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCTGGGGGGATTCCCTCTTTGTCCTGG 22145 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || || || | | || | || || |||||| || | ||| |||||||| Sbjct 22146 ATCTTGGCCTTCACATTTTCGATAGTATCGGAGGGCTCGACCTCGAGGGTGATGGTCTTA 22205 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| || || || || ||||| Sbjct 22206 CCCGTTAGGGTTTTCACGAAAATTTGCAT 22234 >seq830 Length=194395 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| |||| |||| ||||| |||||||| |||||||| || | | |||| ||| Sbjct 124473 ACCAAATGAAGGGTGGATTCCTTTTGAATGTTGTAGTCCGACAGAGTCCTGCCATCTTCC 124532 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| || |||||||||| ||||| || ||| | || | || |||||||| | Sbjct 124533 AATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGG 124592 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| |||||| | | || | ||| | || || || | ||| ||||| ||| Sbjct 124593 ATTTTGGCTTTGACATTTTCAATTGTGTCAGATGGTTCAACTTCCAAGGTAATGGTTTTT 124652 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||| || |||||||||||||| Sbjct 124653 CCAGTCAAGGTTTTAACAAAGATCTGCAT 124681 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 |||||| | ||| | | |||| ||||| ||| |||||||| ||||| ||||| || Sbjct 122612 TCCTCCACGCAAACGTAAAACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCAGA 122671 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 || | | |||| |||| |||||| || || || |||| || ||||| ||| | || Sbjct 122672 CAGAGTTCTGCCATCTTCCAATTGCTTGCCAGCAAAAATCAAACGCTGCTGATCTGGTGG 122731 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || ||||| || | ||||| ||| ||| | || | ||| | || || Sbjct 122732 AATTCCTTCCTTATCCTGGATTTTGGCTTTAACGTTCTCGATTGTATCAGACGGTTCCAC 122791 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || ||||||||||| | || ||||| ||||||||||| Sbjct 122792 CTCCAAAGTGATAGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 122839 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || || || | |||| |||||||||||||||||| ||||| | | | |||| ||| Sbjct 122859 ACTAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCCGACAAAGTTCTACCATCCTCC 122918 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| || || || |||| |||||||||||| | || | || || ||||| | Sbjct 122919 AATTGCTTACCCGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTCTTGA 122978 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| || ||| | || | || | ||| || || | || || |||||| Sbjct 122979 ATTTTAGCCTTTACGTTCTCAATTGTGTCCGATGGCTCCACCTCCAAAGTGATAGTCTTT 123038 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| | || || || || |||||||| Sbjct 123039 CCCGTCAAAGTTTTCACGAAAATCTGCAT 123067 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| |||| ||| ||||| || ||||| ||||| || || | | |||| ||| Sbjct 124017 ACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGACAGAGTCCTGCCATCTTCC 124076 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | ||| || || |||||||||| |||||||| ||| | || | || |||||||| | Sbjct 124077 AATTGTTTACCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCCTTGTCTTGG 124136 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| |||||| | | || | ||| | || || || | || ||||| ||| Sbjct 124137 ATTTTGGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCCAAAGTAATGGTTTTT 124196 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || || || ||||||||||| Sbjct 124197 CCAGTCAATGTTTTAACGAAGATCTGCAT 124225 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| ||||| || || | | |||| |||| ||| || || || ||| Sbjct 124263 TCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCATCTTCCAATTGTTTACCAGCAAAG 124322 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||| ||| | || | || |||||||| | ||||| || ||| | Sbjct 124323 ATCAAACGTTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGGATTTTGGCCTTTACGTTT 124382 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | || || || | ||| || || ||||| || | ||| || || Sbjct 124383 TCAATTGTGTCAGATGGTTCAACTTCCAAGGTAATAGTTTTTCCAGTCAAGGTTTTAACG 124442 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 124443 AAGATCTGCAT 124453 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||| |||||||| || | | |||| |||| ||| || || |||||| Sbjct 124719 TCCTTTTGGATGTTGTAGTCCGACAGAGTCCTGCCATCTTCCAATTGTTTACCAGCGAAG 124778 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||| || | || | ||||| ||||| | || || || || | Sbjct 124779 ATCAAACGTTGCTGATCAGGTGGGATTCCCTCTTTGTCTTGAATCTTAGCCTTCACATTT 124838 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| || ||| || || | || ||||| || || || | ||| || ||| Sbjct 124839 TCAATGGTATCAGAGGGCTCAACCTCCAAAGTGATGGTTTTACCAGTTAAGGTTTTCACA 124898 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 124899 AAGATCTGCAT 124909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325674342378350