Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq830 118 2e-21 >seq830 Length=194395 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| || || |||||||| || ||| | || || |||| || Sbjct 123750 TGCAGATCTTCGTTAAAACCTTGACTGGAAAAACTATCACTTTGGAAGTTGAACCATCCG 123691 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| |||| || || |||||| ||| || ||||| || || || ||||| | Sbjct 123690 ATACAATTGAAAACGTCAAGGCTAAAATCCAAGACAAGGAAGGAATCCCCCCAGATCAGC 123631 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || || ||||||||||| || ||| || || | | ||||| |||| Sbjct 123630 AACGTTTAATCTTCGCCGGTAAACAATTGGAAGATGGCAGGACTCTGTCTGATTACAATA 123571 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || ||||| ||| ||||||| ||||| || | | ||||||| Sbjct 123570 TCCAGAAGGAATCCACTCTCCATTTGGTATTGCGTCTTCGTGGAGGTA 123523 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| || || |||||||| ||||| | || || |||| | Sbjct 124452 TGCAGATCTTCGTTAAAACCTTGACTGGAAAAACTATTACCTTGGAAGTTGAACCATCTG 124393 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| |||| ||||| ||||| ||| || ||||| ||||| || ||||| | Sbjct 124392 ACACAATTGAAAACGTAAAGGCCAAAATCCAAGACAAGGAAGGAATTCCTCCAGATCAGC 124333 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| ||||||||||| || ||| || || | | || || || | Sbjct 124332 AACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCCGACTACAACA 124273 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || ||||| ||| ||||||||||||| || | | ||||||| Sbjct 124272 TCCAGAAGGAATCTACTCTCCATTTAGTATTGCGTCTTCGTGGAGGTA 124225 Score = 107 bits (118), Expect = 3e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || ||||||| || || |||||||| || || | || || |||| || Sbjct 123294 TGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATCACCTTAGAAGTTGAACCATCCG 123235 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | || || || ||||| ||| || ||||| ||||| || ||||| | Sbjct 123234 ATACAATTGAGAACGTTAAGGCCAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAGC 123175 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || ||||||||||| || || ||| || || || | ||||| |||| Sbjct 123174 AACGTTTGATCTTCGCAGGTAAACAGTTGGAGGATGGCAGGACCTTGTCTGATTACAATA 123115 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| ||||| || | ||||| || || || Sbjct 123114 TCCAAAAGGAATCTACATTACATTTGGTTTTGCG 123081 Score = 102 bits (112), Expect = 1e-16 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | |||||||| || |||||||| |||||| | || || |||| | Sbjct 124224 TGCAGATCTTCGTTAAAACATTGACTGGAAAAACCATTACTTTGGAAGTTGAACCATCTG 124165 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| |||| || || ||||| ||| || ||||| || || || ||||| | Sbjct 124164 ACACAATTGAAAACGTCAAGGCCAAAATCCAAGACAAGGAAGGAATCCCTCCAGATCAGC 124105 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || || ||||||||||| || ||| || || | |||| || || | Sbjct 124104 AACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCAGACTACAACA 124045 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| ||||| || | ||||| ||||| || Sbjct 124044 TCCAAAAGGAATCTACCCTTCATTTGGTATTGCG 124011 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| ||||| || ||||| || ||| | || || || | | Sbjct 124908 TGCAGATCTTTGTGAAAACCTTAACTGGTAAAACCATCACTTTGGAGGTTGAGCCCTCTG 124849 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| || ||| || ||| ||||| || || ||||| ||||| | Sbjct 124848 ATACCATTGAAAATGTGAAGGCTAAGATTCAAGACAAAGAGGGAATCCCACCTGATCAGC 124789 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || || ||||||||||| || ||| || || | | || || || | Sbjct 124788 AACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCGGACTACAACA 124729 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||| ||||| || | ||||||||||| || | | ||||||| Sbjct 124728 TCCAAAAGGAATCTACACTTCATTTAGTATTGCGTCTTCGTGGAGGTA 124681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786120704078000