Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq830 156 3e-33 seq429 109 4e-19 seq1314 105 5e-18 >seq830 Length=194395 Score = 156 bits (172), Expect = 3e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||||||||| |||||||| ||||||||||| || |||| | || | Sbjct 124466 ACGCAATACCAAATGAAGGGTGGATTCCTTTTGAATGTTGTAGTCCGACAGAGTCCTGCC 124525 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||| || ||||| | ||||| | ||| ||||| || || || || || || Sbjct 124526 ATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTT 124585 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| ||||||| |||| | |||||||| |||| ||||| | || || Sbjct 124586 GTCTTGGATTTTGGCTTTGACATTTTCAATTGTGTCAGATGGTTCAACTTCCAAGGTAAT 124645 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| |||||||||||||| |||||||| Sbjct 124646 GGTTTTTCCAGTCAAGGTTTTAACAAAGATCTGCAT 124681 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| |||||||| || |||||||| || || ||||| || || | Sbjct 123297 CCTCCACGAAGACGCAAAACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 123356 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | ||||| || ||| | ||||| | ||||||||| || || Sbjct 123357 AGAGTCCTGCCATCTTCCAACTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGGGGG 123416 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || |||||||| ||| || | |||||| |||| | |||||||||| | || || Sbjct 123417 ATCCCTTCCTTGTCTTG-AATCTTAGCCTTGACATTTTCAATAGTGTCAGAAGGCTCAAC 123475 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || ||||| |||||||||||||| ||||| |||||||| Sbjct 123476 CTCCAAAGTGATGGTTTTACCAGTTAAGGTTTTCACAAAAATCTGCAT 123523 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| || |||||||| || ||||| ||||| ||||| || |||| Sbjct 124683 CCTCCACGAAGACGCAATACTAAATGAAGTGTAGATTCCTTTTGGATGTTGTAGTCCGAC 124742 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | |||||| ||||| | ||||| | ||||||||| || || Sbjct 124743 AGAGTCCTGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGTGGG 124802 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || |||||||||||||| ||| || | || ||| |||| | || ||||| | || || Sbjct 124803 ATTCCCTCTTTGTCTTG-AATCTTAGCCTTCACATTTTCAATGGTATCAGAGGGCTCAAC 124861 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || ||||| |||||||||||||| ||||| |||||||| Sbjct 124862 CTCCAAAGTGATGGTTTTACCAGTTAAGGTTTTCACAAAGATCTGCAT 124909 Score = 138 bits (152), Expect = 9e-28 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||||||||| || ||||| ||||| ||||| || || | | || | Sbjct 124010 ACGCAATACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGACAGAGTCCTGCC 124069 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | |||||| ||||| | ||||| | ||||||||| || || || || || || Sbjct 124070 ATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCCTT 124129 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| ||||| |||| | |||||||| |||| ||||| | ||| || Sbjct 124130 GTCTTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCCAAAGTAAT 124189 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| || |||||||| || |||||||| Sbjct 124190 GGTTTTTCCAGTCAATGTTTTAACGAAGATCTGCAT 124225 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| || ||||| || || ||||| || || ||||| || || | Sbjct 124227 CCTCCACGAAGACGCAATACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAC 124286 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | |||||| |||||| | ||||| | ||||||||| || ||| Sbjct 124287 AGAGTCCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGCTGATCTGGAGGA 124346 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | ||| || || |||| | |||||||| |||| ||| Sbjct 124347 ATTCCTTCCTTGTCTTGGATTTTGGCCTTTACGTTTTCAATTGTGTCAGATGGTTCAACT 124406 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || |||||||| ||||| ||||||||||| || |||||||| Sbjct 124407 TCCAAGGTAATAGTTTTTCCAGTCAAGGTTTTAACGAAGATCTGCAT 124453 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| |||||||| || |||||||| || || || || ||||| | Sbjct 123525 CCTCCACGAAGACGCAATACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAATCAGAC 123584 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | |||||| || || | || || | ||||||||| || || Sbjct 123585 AGAGTCCTGCCATCTTCCAATTGTTTACCGGCGAAGATTAAACGTTGCTGATCTGGGGGG 123644 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | ||| ||||| |||| | || || || |||| ||| Sbjct 123645 ATTCCTTCCTTGTCTTGGATTTTAGCCTTGACGTTTTCAATTGTATCGGATGGTTCAACT 123704 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| |||||||| ||||| ||||||||||| || |||||||| Sbjct 123705 TCCAAAGTGATAGTTTTTCCAGTCAAGGTTTTAACGAAGATCTGCAT 123751 Score = 122 bits (134), Expect = 7e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| | ||| | ||| || ||||| || || |||||||||||||||| Sbjct 122841 CCACCACGCAGACGTAACACTAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCCGAC 122900 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || || ||| | ||||| | |||||| || || ||| Sbjct 122901 AAAGTTCTACCATCCTCCAATTGCTTACCCGCAAAAATCAAACGTTGCTGGTCTGGAGGA 122960 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||||||||| |||||| | || || | || | ||||| || | || || Sbjct 122961 ATACCTTCTTTGTCTTG-AATTTTAGCCTTTACGTTCTCAATTGTGTCCGATGGCTCCAC 123019 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || | ||| ||||| || || || || ||||| || || ||||||||| Sbjct 123020 CTCCAAAGTGATAGTCTTTCCCGTCAAAGTTTTCACGAAAATCTGCATT 123068 >seq429 Length=41586 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | || || ||||| || | |||||||| || || ||||| || |||| Sbjct 1110 CCACCCCTGAGGCGGAGGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCCGAC 1169 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| |||||||| || || || | || | | ||||||||| || ||| Sbjct 1170 AGAGTACGTCCATCCTCGAGTTGCTTACCGGCGAAGATAAGACGTTGCTGATCTGGGGGA 1229 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||||| | || || ||| | || | || || ||| | || || Sbjct 1230 ATTCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTATCGGAAGGCTCGACC 1289 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||||| || || || || || || || ||||| || || ||||||||||| Sbjct 1290 TCAAGGGTGATGGTCTTACCCGTCAAAGTTTTTACGAAAATCTGCATTTT 1339 >seq1314 Length=49468 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||||| || || || || || || || ||||| || || | | |||||| Sbjct 22019 ACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCC 22078 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || || || | ||||| | ||||||||| || || || |||||||| Sbjct 22079 ATCCTCGAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCTGGGGGGATTCCCTCTTT 22138 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| |||| | ||| || || | || || || || || || Sbjct 22139 GTCCTGGATCTTGGCCTTCACATTTTCGATAGTATCGGAGGGCTCGACCTCGAGGGTGAT 22198 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || |||| |||||| || || || ||||| Sbjct 22199 GGTCTTACCCGTTAGGGTTTTCACGAAAATTTGCAT 22234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385197368905650