Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq809 233 1e-55 seq4008 201 8e-46 seq3455 118 8e-21 seq1217 102 6e-16 seq3057 89.7 4e-12 seq435 89.7 4e-12 seq1908 87.8 1e-11 >seq809 Length=60095 Score = 233 bits (258), Expect = 1e-55 Identities = 718/1086 (66%), Gaps = 37/1086 (3%) Strand=Plus/Plus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 || ||||| || || || || |||| ||| || || ||||| |||| ||||| |||||| Sbjct 7158 ACGTTAAGGATGCCGTTAGCGTCCAGATCGAAAGTAACTTCGATTTTCGGGACTCCTCTC 7217 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 | || || || || || ||| || || ||||||| || || |||||||| | Sbjct 7218 GGTGCTGGCGGAATTCCGCACAAGTTGAAGGTTCCCAAGAGGTTGTTGTCTTTAGTCATC 7277 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 | ||| || ||||| | |||||| ||||| ||| ||||||||| || |||||||| Sbjct 7278 GCCCTTTCGCCTTCGAAGACTTGGATGGTAACCGCAGATTGATTATCGGAGTAAGTTGTG 7337 Query 281612 AATACTCTGGATTTT--TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAA 281669 || | | | | | || |||||||| | | ||| || |||| || |||||||||| Sbjct 7338 AA--CGTTTGTTGCTGCTTGCAAGGAATCCTCGAGTTCCTCTCAACGATTTTGGTCATAA 7395 Query 281670 TACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTT 281729 || ||||| ||||| | ||| | ||||||||||| ||||| || | || || | || Sbjct 7396 CTCCTCCAGCGGTTTCGATACCCAAAGAAAGAGGAGCAACATCCACCAAGAGAACGTCTT 7455 Query 281730 GAAGTTTTTCATC-AGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCA 281788 | | |||| | | || | || | | ||| ||| |||| | ||||| || || || Sbjct 7456 GGA-TTTTGGAGCTTGTATCTCCGATCAAAATGGCTCCTTGGACGGCAGCGCCGTAGGCG 7514 Query 281789 ACAGCTTCATCAG----GATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGA 281844 ||||| ||||| | ||| |||| |||| || |||| || ||| |||| | Sbjct 7515 ACAGCCTCATCTGGGTTGATGGACAGATTCA---AG-GTTTTGCCGCAGAAGAAATCTTG 7570 Query 281845 AAGAAGTTGTCTTACCTTAGGAATACGAGAT-GATCCTCCAACTAATACAATTTCATGCA 281903 ||| | | | | ||| || || | ||| || || || || || || | || || | Sbjct 7571 AAGCATCTTTTGGATCTTCGGGAT-CCTGATGGAACCACCGACCAAGACTACATCGTGAA 7629 Query 281904 CCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTC 281963 |||||||| || | || ||| | || || || | ||| | | Sbjct 7630 TAGCACCTTTATCCAACTTAGCGTCAGCCAAAGATCGCTCGACCGGCGCCAGAGTGGACC 7689 Query 281964 TAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGAC-ATTATAA-TC 282021 | |||| || || || || |||||| | || || || || | | | || || || Sbjct 7690 TGAACAGATCCATGCAGAGCTCCTCGAATCTTGCCCTGGT--GACTTTCGAGTAAAAGTC 7747 Query 282022 AATTCCTTCGAACAAAGAATCAA-CTTCAATCGTAGTTTGAGTCGAAGAA--GATAGTGC 282078 | |||||| ||||| ||||| || ||| | | | || ||| ||| | ||| | Sbjct 7748 GACACCTTCGTGCAAAGCATCAATCTCCAAGC-TCGCTTCAGTGCTGGAACTCAAAGTCC 7806 Query 282079 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA 282138 | ||||| | ||| || || || || | || || || || | | | |||| Sbjct 7807 TC--TTAGCCCTTTCGCAGGCGGTTCTCAACCTACGCAAAGCCCTCGAGTTTCCGCTCAA 7864 Query 282139 ATCTGTTTTATATTTTCTCTTGAAATCTTCAAC-ACACCATGTTACAAGACGATTATCAA 282197 ||| | ||| | || |||||||| |||||||| | | || | || | ||||||||| | Sbjct 7865 ATCCTTCTTAAACTTCCTCTTGAACTCTTCAACGAAATGAT-TCACCAAACGATTATCGA 7923 Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCAT 282254 ||||||| |||||||| | ||||| || | || | | |||| ||||| ||| | Sbjct 7924 AATCTTCTCCTCCCAAGTGAGTATCACCAGCAGTTGACTTGACTTCAAAAAGAGATCCTT 7983 Query 282255 CTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 282314 | || | | |||| | ||||| |||||||| |||| ||| || || | || | Sbjct 7984 CATCGATTGTTAAAATCGAGACATCGAAAGTTCCACCGCCCAAATCGAAGATCAAAACGT 8043 Query 282315 TCATTTCTTTGTCTT---GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371 || ||| | | ||| ||| ||||| | ||| || || ||||| ||||| ||||||| Sbjct 8044 TC--TTC-TCGCCTTTCAAGTTCTTATCCAAACCGTAAGCCAAAGCTGCAGCGGTTGGTT 8100 Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431 | || || || ||||| || || || || ||||| ||| |||||||| ||||| || | Sbjct 8101 CGTTGATGATCCTCAAGACGTTGAGTCCGGCAATGGCTCCAGCATCTTTGGTGGCCTGCC 8160 Query 282432 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAA 282491 |||| || ||||| || || || |||||||| || || || || | || | | ||| | Sbjct 8161 TTTGGGAGTCGTTGAAGTACGCCGGAACAGTGATCACAGCGTCCTTAACATTTCCTCCCA 8220 Query 282492 TATAAG 282497 ||||| Sbjct 8221 GATAAG 8226 >seq4008 Length=63261 Score = 201 bits (222), Expect = 8e-46 Identities = 695/1073 (65%), Gaps = 12/1073 (1%) Strand=Plus/Minus Query 281405 TTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAAT 281464 ||||| || || || || ||| || || || | ||||| |||||||| | ||| || Sbjct 32342 TTGTTGGTGGACTTTTCGATGGCGGTTACGTTCAAGATACCGTTGGCATCGATATCGAAG 32283 Query 281465 GTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTT 281524 |||||||| ||||| ||||| || ||| | || |||||||| || ||| | ||| || Sbjct 32282 GTGACTTCGATTTGTGGGACACCCCTCGGCGCTGGTGGGATTCCGGTCAACTCGAATTTT 32223 Query 281525 CCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACT 281584 |||| | || || || || || | || ||||| ||| | | ||||| ||| Sbjct 32222 CCCAAGATGTTGTTGTCCTTGGTCATGGCACGCTCACCTTCGTAGACCTGGATCAATACT 32163 Query 281585 ACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTG 281644 | | ||| || || || || || || || | || || || ||||| || ||| Sbjct 32162 CCGGGTTGGTTGTCGGAGTAGGTGGTGAAGGTTTGGGTTTGCTTGGTTGGAATGGTGGTG 32103 Query 281645 TTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGA 281704 || | | || | | |||||| | ||| || || ||||| | ||| ||||| | ||| Sbjct 32102 TTACGCTTGATGAGAGCGGTCATGACACCTCCGGCAGTTTCGATACCGAGAGACAATGGA 32043 Query 281705 GTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGC 281763 || || || | |||| | || ||||| ||| | | ||| ||||| | || Sbjct 32042 GTTACGTCGAGGAGGAGCAGATCTTGAACAGCCTCAGACTTGTCACCGTGCAAGA-TGGC 31984 Query 281764 TGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTT 281823 ||||| | ||| |||||||| || || |||||||| || || | | | || | || Sbjct 31983 GGCTTGGACAGCGGCACCATAGGCGACGGCTTCATCGGGGTTGATGGACTTGTTCAATTC 31924 Query 281824 TTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTC 281882 || |||||||| |||| ||| |||| || | | || ||||| ||||| | || || | Sbjct 31923 CTTTCCATTGAAGAAATCTTGCAAGAGCTTTTGT-ACTTTAGGGATACGGGTGGAGCCAC 31865 Query 281883 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 281942 | || || || || ||||| | || || |||| || | || | || | Sbjct 31864 CGACCAAGACGATGTCATGGATTTGGCTCTTGTCCATCTTGGCGTCACGGATGGACTTCT 31805 Query 281943 CAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAG 282002 | ||||| || | | || |||| || | | ||||||||| | || || | Sbjct 31804 CGACGGGCTCCATGGTACACCTGAACAGATCAGCGTTCAATTCTTCGAACCTGGCCCTGG 31745 Query 282003 TAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG 282060 | || || | || || || ||||||||||| || || | ||| || ||| ||| Sbjct 31744 T--GATGGAAGTGTAGAAATCGGCACCTTCGAACAAGGAGTCGATTTCGATGCTAGCTTG 31687 Query 282061 AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC 282120 || || || || || | ||| || || | ||| || || ||||| || | || | || Sbjct 31686 GGTGGAGGACGAGAGGGTACGCTTCGCCCTTTCGCAGGCAGTCCTGAGACGACGCAGAGC 31627 Query 282121 TT--TTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCAT 282178 ||| || || ||| || | || | || | |||||| |||| || | Sbjct 31626 ACGCTTGTTGGAGGA--CAAGTCCTTCTTGTGCTTGCGCTTGAATTCTTGCACGAAGTGG 31569 Query 282179 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 282238 | || | || ||||| ||||||||||| ||||| | ||| | || | || | | Sbjct 31568 TTGACCATGCGGTTATCGAAATCTTCACCACCCAAGTGAGTGTCACCAGCGGTGGACTTG 31509 Query 282239 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATA 282298 |||| ||| | |||||||| | | || | || ||||| ||| || || |||| | Sbjct 31508 ACTTCGAAGATACCATCTTCGATGGTCAGGATAGACACATCGAAGGTACCGCCGCCCAAA 31449 Query 282299 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 282358 || ||||| || || ||| | || | || || || || | |||||| || | || Sbjct 31448 TCGAAAATGAGCACGTTCCTCTCGCCGACTCCCTTCTTGTCCAAACCATAGGCGATGGCG 31389 Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418 || ||||||||||| || || || | ||| || | | |||| || |||| ||||| Sbjct 31388 GCGGCAGTTGGTTCGTTGATGATACGCAACACCTGCAAGCCAGAGATGGTTCCAGCATCC 31329 Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 || |||||||| | || |||||||| || || || || ||||| ||||| || Sbjct 31328 TTGGTGGCTTGACGCTGGGAATCGTTGAAGTAAGCTGGTACAGTGATAACAGC 31276 >seq3455 Length=151992 Score = 118 bits (130), Expect = 8e-21 Identities = 119/152 (78%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 400262 ATGCTCACAAAGCAGGAACCAAAGAAGGATAT-AAATGTACCCTAATTTTGACAGAGGGA 400320 |||| || |||| ||||| |||||| | ||| |||||||| || || || || |||||| Sbjct 64545 ATGCCAACGAAGCTGGAAC-AAAGAACGCTATGAAATGTACGCTGATCTTAACTGAGGGA 64603 Query 400321 GATTCAGCTAAAACATTCGCTATGTCTGGCCTTAATGTTATTGGAAGAGATTATTATGGA 400380 |||||||| ||| | || || | ||||| || |||||| ||| | ||||| |||||| Sbjct 64604 GATTCAGCCAAATCTTTGGCCGTTTCTGGACTCGGTGTTATAGGACGCGATTACTATGGA 64663 Query 400381 GTTTTCCCACTTAGAGGAAAACTTTTGAATGT 400412 || |||||||| | || |||||||||||||| Sbjct 64664 GTATTCCCACTGCGTGGTAAACTTTTGAATGT 64695 >seq1217 Length=60648 Score = 102 bits (112), Expect = 6e-16 Identities = 235/351 (67%), Gaps = 5/351 (1%) Strand=Plus/Minus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||| ||||||||||||||||| | || | ||| || ||| ||||| ||| | ||| Sbjct 20437 ATCGAAATCTTCACCTCCCAAATGGGTGTCTCCGTTGGTGGCTACTACTTCGAAGACTCC 20378 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 || || | | | || | ||||| ||| || || |||| ||| || | | || Sbjct 20377 ATTGTCGATGGTGAGGAGGGACACATCGAAGGTACCGCCGCCCAAATCGAATACCAAAAC 20318 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 ||| |||| | | | || || || | || || |||| |||||| || || ||||| Sbjct 20317 GTTCTTTTC---GCCGTCCTTCTTGTCCAAGCCGTAAGCAATAGCAGCGGCGGTGGGTTC 20261 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 || || || |||| || || | ||| || || || ||||| || |||||||| | Sbjct 20260 GTTGATGATCCTCATCACGTTCAAACCGGCGATGACACCAGCATCCTTGGTGGCTTGACG 20201 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA-CTTCTTTTCCAA 282491 ||| | |||||| || || || || ||||| | ||||| | || | |||||| |||| Sbjct 20200 TTGAGCATCGTTGAAGTAAGCGGGTACAGTGACGACGGCGTGAGTGACCTTCTTGCCCAA 20141 Query 282492 TATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 282542 ||| || || |||| ||||| || | |||| ||| | || |||| Sbjct 20140 -ATAGGCTTCAGCGGTTTCCTTCATCTTGCCCAAAACCATAGCGGAGATTT 20091 >seq3057 Length=41470 Score = 89.7 bits (98), Expect = 4e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 || |||||||| |||||| | ||||| | |||||||||||||| ||| | || |||||| Sbjct 2475 GGAAAAGAAGGACGTATTCGTGGAAACCTTATGGGAAAGCGTGTGGATTTCTCCGCACGT 2534 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || || || | ||||| ||| || || || |||| || || ||| | |||| Sbjct 2535 ACTGTAATCACACCAGATCCAAATCTTCGAATCGATCAAGTAGGCGTCCCTAGAAGTATT 2594 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAAC 432439 || | |||||||| || |||||||| || Sbjct 2595 GCTCAGAATCTTACGTTCCCTGAAATTGTTAC 2626 >seq435 Length=216619 Score = 89.7 bits (98), Expect = 4e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131180 GTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCAT 131239 |||||||| | || || || |||||||| ||||||||||||| || | |||| ||| Sbjct 209872 GTAGCCACGGTTGCTTTCGGAATGGGTATAGATAAACCGGATGTGAGGAATATTATACAT 209931 Query 131240 TACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGAT 131299 ||||| ||| |||| || | ||| |||| ||||| ||| |||| ||||| || | ||| Sbjct 209932 TACGGCGCTTCCAAAGATTTAGAAAGTTACTATCAGGAAGTTGGAAGAGCGGGAAGAGAT 209991 Query 131300 GG 131301 || Sbjct 209992 GG 209993 >seq1908 Length=44741 Score = 87.8 bits (96), Expect = 1e-11 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 163392 AGATACGCAAATCAAGGTGGTAAACGACCCGGTTCTTTTGCTATTTTTATTGAACCGTGG 163451 || |||| ||| |||||||||| |||||| ||| || |||| | | | | || || ||| Sbjct 4974 AGGTACGTAAACCAAGGTGGTAGACGACCTGGTGCTGTTGCAGTGTATTTAGAGCCTTGG 5033 Query 163452 CATGGAGACATATTCTTTTTTCTTGA-TCTCAAGAAAAATACTGGAGCAGAAACAGAAAG 163510 |||| ||||| | || ||||| ||| || || ||||||||| ||| ||||| Sbjct 5034 CATGCTGACATTATGGAATT-CTTGAATCTAAAAAAGAATACTGGAAATGAAGAGGAAAG 5092 Query 163511 AGCCAGAGATTTATTTTTGGGTTTGATGATTAATGACATTTTCATGGAAAGAGTTTATAA 163570 |||||||||||| |||| | |||| ||| ||| | || ||| || | || | | Sbjct 5093 AGCCAGAGATTTGTTTTATGCTTTGTGGATACCAGACTTATTTATGAAACGTGTAGACAC 5152 Query 163571 AGACGATGTTTGGTCATTAATGTGTCC 163597 || ||| |||||| | ||||| || Sbjct 5153 TGATAGTGTCTGGTCACTGATGTGCCC 5179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740402104650900