Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq830 98.7 8e-16 >seq830 Length=194395 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || |||||||| |||||||| || || |||||| ||||| ||||| Sbjct 124453 ATGCAGATCTTCGTTAAAACCTTGACTGGAAAAACTATTACCTTGGAAGTTGAACCATCT 124394 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || ||||| ||||| ||||| | || ||||| Sbjct 124393 GACACAATTGAAAACGTAAAGGCCAAAATCCAAGACAAGGAAGGAATTCCTCCAGATCAG 124334 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| || |||||||| |||||| | ||| || ||| |||||| Sbjct 124333 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCCGACTACAAC 124274 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || |||||||| || |||||||||||| | | || ||||| Sbjct 124273 ATCCAGAAGGAATCTACTCTCCATTTAGTATTGCGTCTTCGTGGAGG 124227 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| ||||| || ||||| || ||||| || |||| || ||| Sbjct 124909 ATGCAGATCTTTGTGAAAACCTTAACTGGTAAAACCATCACTTTGGAGGTTGAGCCCTCT 124850 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | ||||| || ||| |||||||| || | || |||||| Sbjct 124849 GATACCATTGAAAATGTGAAGGCTAAGATTCAAGACAAAGAGGGAATCCCACCTGATCAG 124790 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | || || |||||||| |||||| | ||| || || |||||| Sbjct 124789 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCGGACTACAAC 124730 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| ||||||||||| |||||||||||| | | || ||||| Sbjct 124729 ATCCAAAAGGAATCTACACTTCATTTAGTATTGCGTCTTCGTGGAGG 124683 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| ||||| |||||||| || ||||| ||| | ||| ||||| | Sbjct 123295 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATCACCTTAGAAGTTGAACCATCC 123236 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || || |||||| ||||| ||||| | || ||||| Sbjct 123235 GATACAATTGAGAACGTTAAGGCCAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAG 123176 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | || || ||||| || || ||| | || || |||||||| Sbjct 123175 CAACGTTTGATCTTCGCAGGTAAACAGTTGGAGGATGGCAGGACCTTGTCTGATTACAAT 123116 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || ||||| ||||||||| ||||||| || ||| | | ||||| ||| Sbjct 123115 ATCCAAAAGGAATCTACATTACATTTGGTTTTGCGTCTTCGAGGCGGA 123068 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||||||||| |||||||| || ||||||||| ||||| ||||| Sbjct 124681 ATGCAGATCTTTGTTAAAACCTTGACTGGAAAAACCATTACCTTGGAAGTTGAACCATCT 124622 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || ||| ||||| ||||| ||||| | || |||||| Sbjct 124621 GACACAATTGAAAATGTCAAAGCCAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAA 124562 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | || || || ||||| |||||| | ||| || || |||||| Sbjct 124561 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGGACTCTGTCGGACTACAAC 124502 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || ||||| ||||| || || ||||| |||||| Sbjct 124501 ATTCAAAAGGAATCCACCCTTCATTTGGTATTG 124469 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || ||||||||||||||||| || |||||||| ||||| ||||| Sbjct 124225 ATGCAGATCTTCGTTAAAACATTGACTGGAAAAACCATTACTTTGGAAGTTGAACCATCT 124166 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || ||||| ||||| ||||| | || ||||| Sbjct 124165 GACACAATTGAAAACGTCAAGGCCAAAATCCAAGACAAGGAAGGAATCCCTCCAGATCAG 124106 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | || || |||||||| |||||| | ||| || || |||||| Sbjct 124105 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCAGACTACAAC 124046 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || ||||| |||||||| || ||||| |||||| Sbjct 124045 ATCCAAAAGGAATCTACCCTTCATTTGGTATTG 124013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402306799227200