Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq830 134 1e-26 seq1314 131 2e-25 seq429 102 8e-17 seq4643 87.8 2e-12 >seq830 Length=194395 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||| | || ||||| || | || || ||||||||||| || ||||||||||| | | Sbjct 123297 CCTCCACGAAGACGCAAAACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 123356 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | | || | || || | |||||| || |||||||||||||| |||||||| || || Sbjct 123357 AGAGTCCTGCCA-TCTTCCAACTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGGGG 123415 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || |||||||| || ||||| || | ||||| || | || || Sbjct 123416 GATCCCTTCCTTGTCTTGAATCTTAGCCTTGACATTTTCAATAGTGTCAGAAGGCTCAAC 123475 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| ||||||||||| ||||| ||||| || ||||| ||||| Sbjct 123476 CTCCAAAGTGATGGTTTTACCAGTTAAGGTTTTCACAAAAATCTGCAT 123523 Score = 129 bits (142), Expect = 6e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 |||| |||| || ||||| || | |||| || ||||||||||| || ||||| || | Sbjct 123067 TTCCGCCTCGAAGACGCAAAACCAAATGTAATGTAGATTCCTTTTGGATATTGTAATCAG 123126 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 ||| | || | || || | |||||| ||||| || |||||||| |||||||| || Sbjct 123127 ACAAGGTCCTGCCA-TCCTCCAACTGTTTACCTGCGAAGATCAAACGTTGCTGATCTGGA 123185 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || ||||| || ||||||||||| || || || | ||| ||||| | ||| Sbjct 123186 GGAATACCTTCCTTGTCTTGAATTTTGGCCTTAACGTTCTCAATTGTATCGGATGGTTCA 123245 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || |||||||| || || || ||||| || ||||||||||| Sbjct 123246 ACTTCTAAGGTGATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 123295 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 || |||||| | | || || || | ||| || || |||||||| || ||||||||||| Sbjct 122609 CTGTCCTCCACGCAAACGTAAAACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTC 122668 Query 134543 -GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGG 134601 | || | | || | || || | || ||||| ||||||||||||||||||||||| | Sbjct 122669 AGACAGAGTTCTGCCA-TCTTCCAATTGCTTGCCAGCAAAAATCAAACGCTGCTGATCTG 122727 Query 134602 GCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATT 134661 | || || ||||| || || || ||||| ||| || || | ||| || |||| || Sbjct 122728 GTGGAATTCCTTCCTTATCCTGGATTTTGGCTTTAACGTTCTCGATTGTATCAGACGGTT 122787 Query 134662 CCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||| || | ||| || || || || || |||||||| ||||| || ||||| Sbjct 122788 CCACCTCCAAAGTGATAGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 122839 Score = 127 bits (140), Expect = 2e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 || ||||| || | || || || ||||||||||| ||||||||||| | || | || Sbjct 124008 AGACGCAATACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGACAGAGTCCTG 124067 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || | ||||| || || || |||||||| |||||||| || || || ||||| Sbjct 124068 CCA-TCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTC 124126 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || ||||| ||||| ||||| || | |||||| || | ||| || || | ||| Sbjct 124127 CTTGTCTTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCCAAAGT 124186 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||| || || || ||||||||||| || ||||| Sbjct 124187 AATGGTTTTTCCAGTCAATGTTTTAACGAAGATCTGCAT 124225 Score = 123 bits (136), Expect = 3e-23 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 || || ||||| || || || ||||| ||||| |||||||| || || | ||| | | | Sbjct 122850 AGACGTAACACTAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCCGACAAAGTTCTA 122909 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || | || || || |||||||||||||| ||||| || || || || ||||| Sbjct 122910 CCA-TCCTCCAATTGCTTACCCGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTC 122968 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 ||| ||||||||||| || || || | |||||| || | ||||| || | ||| Sbjct 122969 TTTGTCTTGAATTTTAGCCTTTACGTTCTCAATTGTGTCCGATGGCTCCACCTCCAAAGT 123028 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || || || |||||||| |||||||| |||||| Sbjct 123029 GATAGTCTTTCCCGTCAAAGTTTTCACGAAAATCTGCATT 123068 Score = 122 bits (134), Expect = 9e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 || ||||| || | || || |||||||||||||||||||||||||| | || | || Sbjct 124464 AGACGCAATACCAAATGAAGGGTGGATTCCTTTTGAATGTTGTAGTCCGACAGAGTCCTG 124523 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || | || || || || || |||||||| || ||||| || || || ||||| Sbjct 124524 CCA-TCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTC 124582 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || ||||| ||||| |||||| || | |||||| || | ||| || || | || Sbjct 124583 CTTGTCTTGGATTTTGGCTTTGACATTTTCAATTGTGTCAGATGGTTCAACTTCCAAGGT 124642 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||| || || || |||||||| || || ||||| Sbjct 124643 AATGGTTTTTCCAGTCAAGGTTTTAACAAAGATCTGCAT 124681 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || ||||| || | || || || |||||||| || |||||||||||| Sbjct 124227 CCTCCACGAAGACGCAATACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAC 124286 Query 134547 ACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || || | || || | ||||| || ||||| |||||||| |||||||| || || Sbjct 124287 AGAGTCCTGCCA-TCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGCTGATCTGGAGG 124345 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| ||||| || || || | |||||| || | ||| || Sbjct 124346 AATTCCTTCCTTGTCTTGGATTTTGGCCTTTACGTTTTCAATTGTGTCAGATGGTTCAAC 124405 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||| ||||| || || || ||||||||||| || ||||| Sbjct 124406 TTCCAAGGTAATAGTTTTTCCAGTCAAGGTTTTAACGAAGATCTGCAT 124453 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||| | || ||||| || | || || ||||||||||| || || ||||| || | | Sbjct 123525 CCTCCACGAAGACGCAATACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAATCAGAC 123584 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | | || | || || | ||||| || || || || ||||| |||||||| || || Sbjct 123585 AGAGTCCTGCCA-TCTTCCAATTGTTTACCGGCGAAGATTAAACGTTGCTGATCTGGGGG 123643 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| ||||| ||||| || | ||| ||||| | ||| || Sbjct 123644 GATTCCTTCCTTGTCTTGGATTTTAGCCTTGACGTTTTCAATTGTATCGGATGGTTCAAC 123703 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || ||||| || || || ||||||||||| || ||||| Sbjct 123704 TTCCAAAGTGATAGTTTTTCCAGTCAAGGTTTTAACGAAGATCTGCAT 123751 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCC 134545 ||||| | || ||||| || | || || || ||||||||||| |||||||||| || | Sbjct 124683 CCTCCACGAAGACGCAATACTAAATGAAGTGTAGATTCCTTTTGGATGTTGTAGTCCGAC 124742 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | | || | || || | ||||| || || || |||||||| |||||||| || || Sbjct 124743 AGAGTCCTGCCA-TCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGTGG 124801 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || ||||| |||||||| || || || || | || || || | || || Sbjct 124802 GATTCCCTCTTTGTCTTGAATCTTAGCCTTCACATTTTCAATGGTATCAGAGGGCTCAAC 124861 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| ||||||||||| ||||| ||||| || || || ||||| Sbjct 124862 CTCCAAAGTGATGGTTTTACCAGTTAAGGTTTTCACAAAGATCTGCAT 124909 Score = 93.3 bits (102), Expect = 4e-14 Identities = 168/245 (69%), Gaps = 18/245 (7%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||| | || ||||| || | || || ||||||||||| || ||||||||||| | | Sbjct 123753 CCTCCACGAAGACGCAATACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 123812 Query 134546 A----ACGGT-----GTGAGAGTCGT--------CGAGCTGTTTGCCTGCAAAAATCAAA 134588 | | || | |||||| | | | ||||| || || || || ||| Sbjct 123813 AGGATATTGTAATCAGACAGAGTCCTGCCATCTTCCAATTGTTTTCCGGCGAAGATTAAA 123872 Query 134589 CGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT 134648 || |||||||| || || || ||||| || ||||| ||||| || || || | | Sbjct 123873 CGTTGCTGATCTGGGGGGATTCCTTCCTTGTCTTGGATTTTGGCCTTAACGTTCTCAATT 123932 Query 134649 GTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATT 134708 || ||||| | ||| || || | ||| |||||||| || || || ||||||||||| || Sbjct 123933 GTATCGGATGGTTCAACTTCTAAAGTGATGGTTTTTCCAGTCAATGTTTTAACGAAGATC 123992 Query 134709 TGCAT 134713 ||||| Sbjct 123993 TGCAT 123997 >seq1314 Length=49468 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||||||| | ||| || || || ||||| || |||||||||||| Sbjct 22008 CCACCACGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 22067 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| || || || || |||||||| |||||||| || || Sbjct 22068 AGGGTGCGTCCATCCTCGAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCTGGGGGG 22127 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || ||||| || || || || || || || | || ||||| | || || Sbjct 22128 ATTCCCTCTTTGTCCTGGATCTTGGCCTTCACATTTTCGATAGTATCGGAGGGCTCGACC 22187 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| ||||| |||| ||||| |||||||||||||| Sbjct 22188 TCGAGGGTGATGGTCTTACCCGTTAGGGTTTTCACGAAAATTTGCAT 22234 >seq429 Length=41586 Score = 102 bits (112), Expect = 8e-17 Identities = 163/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| || | || | ||| | ||||||||||| || |||||||||| || Sbjct 1110 CCACCCCTGAGGCGGAGGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGT--CCG 1167 Query 134547 ACGGTGT--GAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || | || | || ||||| || || || || || || | ||| |||||||| || | Sbjct 1168 ACAGAGTACGTCCATCCTCGAGTTGCTTACCGGCGAAGATAAGACGTTGCTGATCTGGGG 1227 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || || || ||||| || || || || || | || ||||| | || | Sbjct 1228 GAATTCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTATCGGAAGGCTCGA 1287 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 | || || || ||||| ||||| || |||||||| |||||||| |||||||| Sbjct 1288 CCTCAAGGGTGATGGTCTTACCCGTCAAAGTTTTTACGAAAATCTGCATTTT 1339 >seq4643 Length=985661 Score = 87.8 bits (96), Expect = 2e-12 Identities = 220/328 (67%), Gaps = 6/328 (2%) Strand=Plus/Plus Query 8585 TGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCA 8644 ||||||| || ||| | || || | | || | ||||||| |||| || | | | | | Sbjct 333836 TGGCCGATGCTTTTATCTTGATGAGGATTCCGTTCGAAAGCGAAGACGCACAAAAGGTTA 333895 Query 8645 ACATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCC 8704 | || | ||| || || | ||||| || || ||||| ||||||||| || ||||| Sbjct 333896 ATGTACAGATATTCGAGACTCTTTATTATGGAGCTTTAGAGGCCAGCTGTGAAATTGCCG 333955 Query 8705 GA-GAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAA 8763 | || ||| | | ||| | |||| || || ||||| ||||| | ||| Sbjct 333956 AAAGAGATGGAC-CATACTCGACATACGAAGGATCTCCGGCCAGTAAGGGAATTCTCCAA 334014 Query 8764 TACGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAA 8823 ||| | ||||||||||| || || || ||| |||||||||| | ||| ||| | ||| Sbjct 334015 TACAATATGTGGAATGTAACACCAACAGATTTATGGAATTGGACTGCTTT-AAAGGAAAA 334073 Query 8824 ATTGCTCAA--TTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGA 8881 | | ||||| ||| | | ||||| || | | ||| ||||| || |||| | Sbjct 334074 AAT-CTCAAAGCACGGAATCAGGAATTCTCTTCTTCTAGCTCCTATGCCTACGGCCAGCA 334132 Query 8882 CTGCTCAAATAATGGGAAACAACGAATC 8909 |||| ||||| | ||||||||||| || Sbjct 334133 CTGCCCAAATTTTAGGAAACAACGAGTC 334160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505369023718000