Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4241 138 1e-27 seq4643 129 7e-25 seq1908 129 7e-25 seq3455 89.7 6e-13 >seq4241 Length=192509 Score = 138 bits (152), Expect = 1e-27 Identities = 687/1080 (64%), Gaps = 17/1080 (2%) Strand=Plus/Plus Query 118181 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 118240 ||| || || | ||||| || || ||| |||| ||||| || || |||||||| ||| Sbjct 52021 ATAAATGTTACTTGTGTACGGTTCGAAGGACTCGTTGTTTCCTAAAATTTGGGCAGTGCT 52080 Query 118241 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC 118300 ||||| ||||| ||||| | || || || | || || | | || ||| Sbjct 52081 AGCTGTTGGCATAGGTGCAAGAAGGAGAGAATTCCTGATTCCGTGCTTGGCGATTTTTTC 52140 Query 118301 CTTGAGAGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGG 118358 ||| | ||| |||| || ||| | | || || | | | ||||||||| | ||| Sbjct 52141 CTTTAAGGCGGCCCAATCCCATAGGTCTG-TTGGTGTTACATT-CCACATATCGTATTGG 52198 Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418 || || || | | || || ||||| | | | || ||| || || || || || Sbjct 52199 AGAATTCCCTTGCTGGCCGGAGATCCTTTATAAGTTGAATACGGTCCATCTCTTTCAGCG 52258 Query 118419 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA-- 118476 | ||| |||||| || | ||| | | || | || || || || | |||| | Sbjct 52259 ATTTCACAGCTCGTTTCTAAAGCTCCATAGTAAAGAGTCTCGAATATCTGTACATTTAAC 52318 Query 118477 TTGCCTTG-GCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAG 118534 || ||| || || ||| || |||| || || || ||| ||||| |||| || | Sbjct 52319 TT---TTGTGCTTCTTCGCTTTCGAACG-GAATCCTCATCAAGATAAAAGCATCGGCCAA 52374 Query 118535 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCAC 118594 ||| || | ||||| |||||||| |||||||||||||| || || | ||| ||| Sbjct 52375 ACCCTGTATACCGATACCAATTGGACGATGTCTCATATTTGAGTTTCTAGCTTCAGGCAC 52434 Query 118595 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 118654 ||||| | || | ||||| | | | || |||||| | || || | || |||| ||| Sbjct 52435 AGGATAGTAGTTGATGTCGATGATCTTGTTCAGATTTCTAGTAACTAGTTTGGTGAGTTC 52494 Query 118655 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 118714 | || || | |||| || || | ||| || ||| || | || ||| || Sbjct 52495 CTTCAGTTTGATGAAATCGAA--TGATT-TATCTGGTTTTACAAACATGTTAACGGCAAT 52551 Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774 |||||| | |||||| || | || || || ||||||| || | ||||| ||||| Sbjct 52552 TGACGCTAAATTACAGACGGCAGTTTCGTCGGGCGCAGTGTATTCCACTATTTCTGTGCA 52611 Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834 || ||| || || || || || ||||| |||| ||| || ||| | ||| || ||||| Sbjct 52612 CAGGTTCGAGCTTTTGATTGTCCCCAAATTCTGTTGGTTGCTCTTCGAGTTGCAGGCATC 52671 Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 118894 |||||| | |||||| || || ||| |||| || | | ||| || ||| || Sbjct 52672 CTTGTACATCATGTAAGGAACACCAACCTCAATTTGCGAGATAACAATTGCGCGCCAAAC 52731 Query 118895 ATCGGCAGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGG 118953 || ||| || | | || ||| | || || | ||||| ||| ||||| Sbjct 52732 TTCTCTAGCCGGAATCTGT-TTGTTATATTTTCCTTCGGCTTCGTATTTTTCATAGAGCT 52790 Query 118954 CTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAG 119013 ||| |||||||| ||| | || || | || || ||||| ||||| | || | Sbjct 52791 TTTCGAACTCTTCGCCCCAGCAGTCCGACAATCCAGGACACTTATGAGGGCACATCAGTG 52850 Query 119014 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGA 119073 |||| || | | |||| || || ||||| || | ||| || ||||| | || | | Sbjct 52851 ACCAGACACTATCAGCCTCTACGCGTTTCATAAACAAGTCCGGTATCCACAAGGCATAAA 52910 Query 119074 AGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCA 119133 | | ||||| | | ||||||| ||| ||| || | || || |||| Sbjct 52911 ACAAATCCCTGGCTCTTTCCTCTTCATTTCCCGTATTCCTTTTCAGATTCACGAATTCCA 52970 Query 119134 TGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGACCAGCCT 119193 | || || || ||||| || |||| |||||||| | || || | | |||| | | Sbjct 52971 TAATGTCAGCATGCCAAGGCTCCAAATACACCGCAACGGAGCCAGGTCTTCTACCACCTT 53030 Query 119194 GGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATT 119253 |||| || | |||||| || ||| || || | ||| || | || ||||| |||| Sbjct 53031 GGTTCACGTGCCTCGCTGTTTGGTTGAACACTTTCAACATAGGCACAATTCCATCCGATT 53090 >seq4643 Length=985661 Score = 129 bits (142), Expect = 7e-25 Identities = 590/923 (64%), Gaps = 26/923 (3%) Strand=Plus/Minus Query 118343 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 118402 |||||||| | ||||| || || | || || ||||| || ||||| ||||| Sbjct 334026 CCACATATTGTATTGGAGAATTCCCTTACTGGCCGGAGATCCTTCGTATGTCGAGTATGG 333967 Query 118403 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAA 118462 || || || || | ||| |||| ||||| | ||| | | ||| | || || || Sbjct 333966 TCCATCTCTTTCGGCAATTTCACAGCTGGCCTCTAAAGCTCCATAATAAAGAGTCTCGAA 333907 Query 118463 AATGCGAGCATTCATTGCCTTG---GCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAA 118518 || | |||| | |||| || || ||| || |||| || || || ||| | Sbjct 333906 TATCTGTACATTAA---CCTTTTGTGCGTCTTCGCTTTCGAACG-GAATCCTCATCAAGA 333851 Query 118519 TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 118578 |||| |||| || | || || | ||| | |||||||| |||||||||||||| || | Sbjct 333850 TAAAAGCATCGGCCAATCCCTGTATACCAATACCAATTGGACGATGTCTCATATTTGAGT 333791 Query 118579 TCCGAGC----GGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 118634 | | ||| ||| || |||||| | || | ||||| | | | || |||||| | Sbjct 333790 TTCTAGCTTCAGGT----ACAGGATAATAGTTGATGTCGATGATCTTGTTCAGATTTCTA 333735 Query 118635 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG 118694 || || | || || | ||| | | || | |||| || || | ||| || Sbjct 333734 GTAACTAGTTTGGTAAGTTCCTTTAATTTGATGAAATCGAA--TGATT-TATCTGGTTTT 333678 Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754 ||| || || || ||| || || |||| |||||| || | || || || |||| Sbjct 333677 ACAAACATATTAACGGCAATGGATGCCAAATTACAGACGGCAGTTTCGTCGGGCGCAGTA 333618 Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814 || || || ||||| ||||||| ||| || ||||| || |||||||| |||| ||| || Sbjct 333617 TATTCCATTATTTCTGTGCACAGGTTCGAGCTCTTGATTGTGCCCAAATTCTGTTGGTTA 333558 Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874 ||||| ||| || ||||||||||| ||||| || || || ||| |||| || Sbjct 333557 CTCTTTGAGTTGCAGGCATCCTTGTACAGCATATAAGGAACACCAACCTCAATTTGCGAG 333498 Query 118875 TTGAGAATAGCCTTCCAGACATCGGCAGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCTTC 118933 | | ||| || ||| || || ||| || | | || || | || || | Sbjct 333497 ATAACAATTGCGCGCCAAACTTCTCTAGCCGGTATCTGT-TTATTATATTTACCTTCGGC 333439 Query 118934 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCC--ACGGCCTCTGAGAGCCCTGGT 118991 ||||| ||| ||||| ||| |||||||| ||| || | || || | ||||| Sbjct 333438 TTCGTATTTTTCATAGAGTTTTTCGAACTCTTCGCCCCAACAG--TCCGATAATCCTGGA 333381 Query 118992 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGG 119051 ||||| ||||| | || ||||| | | | || || || ||||| || | | Sbjct 333380 CACTTATGAGGGCACATCAGTGACCAGACAGAATCAGTGTCTACACGTTTCATAAATAAG 333321 Query 119052 TCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 119111 ||||| ||||| | || | || | ||||| | | ||||||| ||| ||| Sbjct 333320 TCTGGTATCCACAAGGCATAAAACAAATCCCTGGCTCTTTCCTCTTCATTCCCTGTATTC 333261 Query 119112 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 119171 | | || || ||||| ||||| || |||||||| |||| ||||| || | Sbjct 333260 TTTTTTAGATTCAGGAATTCCATAATATCTGCATGCCACGGCTCCAAATACACAGCAACA 333201 Query 119172 GACCCCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC-ACGAAG 119230 | || || | |||| | ||||| || |||||||| || ||| || || ||| Sbjct 333200 GCACCAGGTCGTCTACCACCTTGGTTCACGTACCTCGCTGTATTGTTGAACACTTTGAAC 333141 Query 119231 CATTGGAATGATACCATCGGATT 119253 ||| |||| |||||| |||| Sbjct 333140 CATCCGAATTGAACCATCCGATT 333118 >seq1908 Length=44741 Score = 129 bits (142), Expect = 7e-25 Identities = 836/1328 (63%), Gaps = 41/1328 (3%) Strand=Plus/Minus Query 117945 TGATCGATGAA-GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTC 118003 ||||| || || ||| || ||||| || | ||| | |||||| |||| | ||| || Sbjct 6232 TGATCAATAAATGCG-CCACGATCTGCGGACATGTTGATCACAGTCTTCTGCGAGATCTC 6174 Query 118004 CCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGA 118063 ||||||||| | || || ||||| ||||||||||| ||| ||| || |||||||| Sbjct 6173 CCACACAGTTTTATATAGTTTCTTGATATCATCTGGAATACTGGGGATGTTCTGGATGGA 6114 Query 118064 TCCACCCGCCTTGACCATGAGATC---CTTCATATCCTTTGACCAGAGACCAATCTTTTT 118120 ||| ||| | || || | |||||| ||| ||| || || | | | Sbjct 6113 ACCATAG---TTGGCGATAAGTTGGTTCTTCATGACCTCGTCCCACAGGCCTAGTTCTAC 6057 Query 118121 GAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCG-TCTCA 118179 ||||| | | | ||| | ||||| ||| || || || || ||| ||| Sbjct 6056 CAGATCTTTTAATAAATGATGATTGATAACTGGGAATTCTCCAGCT----TGCACTCTGC 6001 Query 118180 GA---TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG 118236 || || ||||| | ||||| || || | | ||||||| || || || |||||||| | Sbjct 6000 GAGTGTAAATATTACTTGTGTACGGTTCGATGGACTCATTATTTCCTAAAATTTGGGCAG 5941 Query 118237 TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGC 118296 | || || ||||| || || | || || || | || || | | || Sbjct 5940 TACTAGCCGTTGGCATAGGAGCTAGAAGGAGAGAATTCCTGATTCCGTGCTTGGCGATTT 5881 Query 118297 GTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCT-TTGTCTCCCCCTGCCACATATCAAAC 118355 ||| || | || |||| || | | | || ||| | | |||||||||| | Sbjct 5880 TTTCTTTTAAGGCAGCCCAATCCCA-TAAATCTGTTGGTGTTACATTCCACATATCATAT 5822 Query 118356 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 118415 || || || || | || || ||||| || ||||| ||||| || || || Sbjct 5821 TGTAGAATTCCCTTACTGGCCGGAGATCCTTCGTATGTCGAGTATGGTCCATCTCTTTCA 5762 Query 118416 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 || | ||| |||| | ||| | ||| | | ||| | || || || || | |||| Sbjct 5761 GCAATTTCACAGCTGGACTCTAAAGCTCCATAATAAAGAGTCTCGAATATCTGTACATTA 5702 Query 118476 ATTGCCTTG---GCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGC 118531 | |||| || || ||| || |||| || || || ||| ||||| |||| || Sbjct 5701 A---CCTTTTGTGCTTCTTCGCTTTCGAACG-GAATCCTCATCAAGATAAAAGCATCGGC 5646 Query 118532 GAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGC----GG 118587 | || || | ||| | |||||||| |||||||||||||| || || | ||| || Sbjct 5645 CAATCCCTGTATACCAATACCAATTGGACGATGTCTCATATTTGAGTTTCTAGCTTCAGG 5586 Query 118588 TCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 118647 | || |||||| | || | ||||| | | | || |||||| | || || | || | Sbjct 5585 T----ACAGGATAATAGTTGATGTCGATGATCTTGTTCAGATTTCTAGTAACTAGTTTGG 5530 Query 118648 TGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC-TCTTCATTGACATACTTAGGA 118706 | | ||| | | || | | || ||| || | ||| || ||| || || | Sbjct 5529 TAAGTTCCTTTAATTTGATGAAGTCGAAA----GATTTATCTGGCTTTACAAACATATTA 5474 Query 118707 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 118766 | ||| || ||||||| ||| || || | || ||||| |||| || || |||||| Sbjct 5473 ACGGCAATGGACGCCAAATTGCAGACGGCAGTTTCATCGGGCGCAGTATATTCCATAATT 5414 Query 118767 TCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 118826 || ||||||| || || ||||| || || ||||| |||||||| || ||||| ||| Sbjct 5413 TCTGTGCACAGATTCGAGCTCTTGATTGTCCCCAAATTCTTTTGGTTACTCTTTGAGTTG 5354 Query 118827 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 118886 || ||||||||||| ||||| || || || ||| |||| || | | ||| || Sbjct 5353 CAGGCATCCTTGTACAGCATATAAGGAACACCAACCTCAATTTGCGAGATAACAATTGCG 5294 Query 118887 TTCCAGACATCGGCAGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGT 118945 ||| || || ||| || | | || ||| | || || | ||||| ||| Sbjct 5293 CGCCAAACTTCTCTAGCCGGTATCTGT-TTGTTATATTTACCTTCAGCTTCGTATTTTTC 5235 Query 118946 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 119005 ||||| ||| |||||||| ||| | || || | ||||| ||||| ||||| Sbjct 5234 ATAGAGCTTTTCGAACTCTTCGCCCCAGCATTCCGATAATCCTGGACACTTATGAGGGCA 5175 Query 119006 GAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 119065 | || ||||| || | | || || || ||||| || | |||||| ||||| | Sbjct 5174 CATCAGTGACCAGACACTATCAGTGTCTACACGTTTCATAAATAAGTCTGGTATCCACAA 5115 Query 119066 CGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 119125 || | || | ||| | | | ||||||| || ||| | | ||| Sbjct 5114 AGCATAAAACAAATCTCTGGCTCTTTCCTCTTCATTTCCAGTATTCTTTTTTAGATTCAA 5055 Query 119126 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG 119185 || ||||| || || || ||||| || || | ||||| || | | || || | Sbjct 5054 GAATTCCATAATGTCAGCATGCCAAGGCTCTAAATACACTGCAACAGCACCAGGTCGTCT 4995 Query 119186 ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACC 119245 |||| | |||||||| |||||||| || ||| || || | ||| || | || || Sbjct 4994 ACCACCTTGGTTTACGTACCTCGCTGTATGGTTGAACACTTTCAACATAGGCACAATTCC 4935 Query 119246 ATCGGATT 119253 ||| |||| Sbjct 4934 ATCAGATT 4927 >seq3455 Length=151992 Score = 89.7 bits (98), Expect = 6e-13 Identities = 129/179 (72%), Gaps = 6/179 (3%) Strand=Plus/Minus Query 179065 TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATTG 179124 ||||||||||| | ||||| || || |||||||||| || || || ||||| ||||| Sbjct 65760 TCTTTGCCACCAGTTAGACGAGTTCCGAATTGACCACGAGGTTCCAGCAGATTTATATTA 65701 Query 179125 TTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGAC--TTCA 179181 || ||| | ||||| | |||||| || || || || | | ||||| |||| Sbjct 65700 TTACTACCTACGTAGTTTTGGGCCAAACCCACGATAGTCATAC---AAAGAGACTGTTCA 65644 Query 179182 CCGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTC 179240 || |||||||| ||||| | || || || | ||||||| ||||| ||||||| ||| Sbjct 65643 CCATGATGGTACGCCGAATGCTCGGCTACGGAACCCGCCAATTGCGCTACCTTCACCTC 65585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618399253454000