Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq830 170 2e-37 seq429 159 4e-34 >seq830 Length=194395 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || || | || || || || || ||| | ||||||||| | | Sbjct 124909 ATGCAGATCTTTGTGAAAACCTTAACTGGTAAAACCATCACTTTGGAGGTTGAGCCCTCT 124850 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| |||| |||||||||| ||||| ||||| |||||||| || || || ||| Sbjct 124849 GATACCATTGAAAATGTGAAGGCTAAGATTCAAGACAAAGAGGGAATCCCACCTGATCAG 124790 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || || |||||||| ||| | || |||| | || || | ||||| || Sbjct 124789 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCGGACTACAAC 124730 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| || |||||| |||| ||||||||||| || || Sbjct 124729 ATCCAAAAGGAATCTACACTTCATTTAGTATTGCGTCTTCGTGGAGG 124683 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || || || | || || |||||||| ||| | ||||| ||| || Sbjct 123068 AATGCAGATTTTCGTGAAAACTTTGACGGGAAAGACTATCACTTTGGAGGTGGAGCCATC 123009 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| || | |||||||||||||| ||||| || || |||||||||||||| Sbjct 123008 GGACACAATTGAGAACGTAAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGACCA 122949 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||| | |||||||| ||||||||| | ||||||| | | || | | || ||||| Sbjct 122948 GCAACGTTTGATTTTTGCGGGTAAGCAATTGGAGGATGGTAGAACTTTGTCGGATTATAA 122889 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| || |||||||| || ||||| || ||||| Sbjct 122888 CATTCAGAAGGAGTCCACCCTCCATCTAGTGTTACGTCTGCGTGGTGG 122841 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || | || || || || |||||| | || ||||| || | Sbjct 124225 ATGCAGATCTTCGTTAAAACATTGACTGGAAAAACCATTACTTTGGAAGTTGAACCATCT 124166 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||| ||||| || |||||||| ||||| |||||||| ||| Sbjct 124165 GACACAATTGAAAACGTCAAGGCCAAAATCCAAGACAAGGAAGGAATCCCTCCAGATCAG 124106 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || || |||||||| ||| | || |||| | || || ||||||| || Sbjct 124105 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCAGACTACAAC 124046 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| || |||||| | || ||||||||||| ||||| Sbjct 124045 ATCCAAAAGGAATCTACCCTTCATTTGGTATTGCGTCTTCGTGGTGG 123999 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || | || || || |||||||| | || ||||| || | Sbjct 124453 ATGCAGATCTTCGTTAAAACCTTGACTGGAAAAACTATTACCTTGGAAGTTGAACCATCT 124394 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||| ||||| || |||||||| |||||||||||||| ||| Sbjct 124393 GACACAATTGAAAACGTAAAGGCCAAAATCCAAGACAAGGAAGGAATTCCTCCAGATCAG 124334 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || ||||||||||| ||| | || |||| | || || | ||||| || Sbjct 124333 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGGACTCTGTCCGACTACAAC 124274 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| ||||| ||| |||| ||||||||||| || || Sbjct 124273 ATCCAGAAGGAATCTACTCTCCATTTAGTATTGCGTCTTCGTGGAGG 124227 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || || | || || || || ||||| | || ||||| || | Sbjct 124681 ATGCAGATCTTTGTTAAAACCTTGACTGGAAAAACCATTACCTTGGAAGTTGAACCATCT 124622 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || || ||||| || |||||||| ||||| || ||||| || Sbjct 124621 GACACAATTGAAAATGTCAAAGCCAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAA 124562 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || || |||||||||||| | || |||| | || || | ||||| || Sbjct 124561 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGGACTCTGTCGGACTACAAC 124502 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||||||||| |||||| | || ||||||||||||||||| Sbjct 124501 ATTCAAAAGGAATCCACCCTTCATTTGGTATTGCGTCTTCGCGGTGG 124455 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || | || || || || || ||| | ||||||||| | | Sbjct 123523 ATGCAGATTTTTGTGAAAACCTTAACTGGTAAAACCATCACTTTGGAGGTTGAGCCTTCT 123464 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | |||||||| ||||| |||||||| || || || ||||| ||| Sbjct 123463 GACACTATTGAAAATGTCAAGGCTAAGATTCAAGACAAGGAAGGGATCCCCCCAGATCAG 123404 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | |||||||| ||||| || | || |||| | || || | ||||| || Sbjct 123403 CAACGTTTGATTTTTGCCGGTAAACAGTTGGAAGATGGCAGGACTCTGTCTGACTACAAC 123344 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||||||||| ||| | || ||||||||||| || || Sbjct 123343 ATCCAGAAGGAATCCACTCTCCATTTGGTTTTGCGTCTTCGTGGAGG 123297 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || | || || || ||||| ||| | || ||||| || Sbjct 123751 ATGCAGATCTTCGTTAAAACCTTGACTGGAAAAACTATCACTTTGGAAGTTGAACCATCC 123692 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||||||||||| || |||||||| ||||| || ||||| ||| Sbjct 123691 GATACAATTGAAAACGTCAAGGCTAAAATCCAAGACAAGGAAGGAATCCCCCCAGATCAG 123632 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| |||| || || ||||| ||| | || |||| | || || | || || ||| Sbjct 123631 CAACGTTTAATCTTCGCCGGTAAACAATTGGAAGATGGCAGGACTCTGTCTGATTACAAT 123572 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||||||||| ||| | || ||||||||||| || || Sbjct 123571 ATCCAGAAGGAATCCACTCTCCATTTGGTATTGCGTCTTCGTGGAGG 123525 Score = 136 bits (150), Expect = 5e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || | || || |||||||| ||| | ||||| || | | Sbjct 122839 ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACTATCACTTTGGAGGTGGAACCGTCT 122780 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | || | || || ||||| ||||| ||||| |||||||| ||||| ||| Sbjct 122779 GATACAATCGAGAACGTTAAAGCCAAAATCCAGGATAAGGAAGGAATTCCACCAGATCAG 122720 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | ||||||||||| |||||| | || |||| | || || | ||||| || Sbjct 122719 CAGCGTTTGATTTTTGCTGGCAAGCAATTGGAAGATGGCAGAACTCTGTCTGACTACAAC 122660 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| |||||||| || ||||| | || || ||| | || || ||||| Sbjct 122659 ATCCAGAAGGAATCAACCCTTCACTTGGTTTTACGTTTGCGTGGAGGACA 122610 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || | || || || || || || | || ||||| || Sbjct 123295 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATCACCTTAGAAGTTGAACCATCC 123236 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | ||||| |||||||| |||||||| || ||||||||||| ||| Sbjct 123235 GATACAATTGAGAACGTTAAGGCCAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAG 123176 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || || || ||||| || | ||||||| | ||| | | || || ||| Sbjct 123175 CAACGTTTGATCTTCGCAGGTAAACAGTTGGAGGATGGCAGGACCTTGTCTGATTACAAT 123116 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 ||||||||||||| || | ||| | || ||||||||||| || ||| Sbjct 123115 ATCCAAAAGGAATCTACATTACATTTGGTTTTGCGTCTTCGAGGCGGA 123068 >seq429 Length=41586 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || || || | || || ||||| || || |||||||| ||| | Sbjct 1337 AATGCAGATTTTCGTAAAAACTTTGACGGGTAAGACCATCACCCTTGAGGTCGAGCCTTC 1278 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||| | ||| ||||||| || || || ||||||||||||||||| ||||| || Sbjct 1277 CGATACCATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGAATTCCCCCAGATCA 1218 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||||| || || || ||||||||||||||||||| ||||| || | ||||| || Sbjct 1217 GCAACGTCTTATCTTCGCCGGTAAGCAACTCGAGGATGGACGTACTCTGTCGGACTACAA 1158 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||||||| | || | ||| | || || | ||||| Sbjct 1157 CATCCAGAAGGAATCCACTTTGCACTTGGTCCTCCGCCTCAGGGGTGG 1110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570277250708000