Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq386 156 3e-33 >seq386 Length=1605 Score = 156 bits (172), Expect = 3e-33 Identities = 273/396 (69%), Gaps = 6/396 (2%) Strand=Plus/Minus Query 119704 TAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATT 119763 |||||||||| | | ||||| || | ||| ||||| ||||||||||| ||||| | Sbjct 989 TAAACAATTTCAAGAAGATGTGATAATTGTCGCCGTAGGCTACTATCTTCGATATAATCT 930 Query 119764 GAGTTATCGTGATATATCTGAAATATTAAGGGGACGTGGTGTAAACGTTCATCATTCAAC 119823 || ||||| || | |||||| | | |||||| ||||||| |||| | || Sbjct 929 TAGCTATCGCGAGGTTCAGGAAATACTGTATGATCGTGGTATAAACGTGTGTCATACGAC 870 Query 119824 GGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCA 119883 | || || ||||| || ||||||| | | | | ||| ||||||||||| || | Sbjct 869 AATTTATCGATGGGTCCAGGAATATGGACGACTACTTTATACTATTTGGAAGAAGAAAAA 810 Query 119884 TAAAAAAGCTTATTACAAATGGCGTATTGATGAGACGTACATCAAAATAAAAGGAAAATG 119943 |||| || | | ||| ||| || ||||| || || || ||||| ||||||| || Sbjct 809 TAAACAATCCTTTTATTCGTGGAAAATGGATGAAACCTATATTAAAATCAAAGGAACGTG 750 Query 119944 GAGCTATTTATATCGTGCCATTGATGCAGAGGGACATACATTAGATATTTGGTTGCGTAA 120003 | |||| | ||||| || || ||||| || || | || || ||||| ||| | ||||| Sbjct 749 GCACTATCTCTATCGAGCAATCGATGCGGATGGGCTCACGTTGGATATCTGGCTACGTAA 690 Query 120004 GCAACGAGATAATCATTCAGCATATGCGTTTATCAAACGTCTCATTAAACAATTTGGTAA 120063 | ||||||| || |||| || || ||| ||||||| | | ||||| |||| | | Sbjct 689 AAAGCGAGATACACAAGCAGCTTACGCCTTTCTCAAACGATTGGTAAAACAGTTTGATGA 630 Query 120064 ACCTCAAAAGG---TAATTACAGATCAGGCACCTTC 120096 ||| ||||| || | || ||| | |||||||| Sbjct 629 ACC---AAAGGTTCTAGTAACTGATAAAGCACCTTC 597 Score = 152 bits (168), Expect = 4e-32 Identities = 272/396 (69%), Gaps = 6/396 (2%) Strand=Plus/Minus Query 127011 TAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATT 127070 |||||||||| | | ||||| || | ||| ||||| ||||||||||| ||||| | Sbjct 989 TAAACAATTTCAAGAAGATGTGATAATTGTCGCCGTAGGCTACTATCTTCGATATAATCT 930 Query 127071 GAGTTATCGTGATATATCTGAAATATTAAGGGGACGTGGTGTAAACGTTCATCATTCAAC 127130 || ||||| || | |||||| | | |||||| ||||||| |||| | || Sbjct 929 TAGCTATCGCGAGGTTCAGGAAATACTGTATGATCGTGGTATAAACGTGTGTCATACGAC 870 Query 127131 GGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCA 127190 | || || ||||| || ||||||| | | | | ||| ||||||||||| || | Sbjct 869 AATTTATCGATGGGTCCAGGAATATGGACGACTACTTTATACTATTTGGAAGAAGAAAAA 810 Query 127191 TAAAAAAGCTTATTACAAATGGCGTATTGATGAGACGTACATCAAAATAAAAGGAAAATG 127250 |||| || | | ||| ||| || ||||| || || || ||||| ||||||| || Sbjct 809 TAAACAATCCTTTTATTCGTGGAAAATGGATGAAACCTATATTAAAATCAAAGGAACGTG 750 Query 127251 GAGCTATTTATATCGTGCCATTGATGCAGAGGGACATACATTAGATATTTGGTTGCGTAA 127310 | |||| | ||||| || || ||||| || || | || || ||||| ||| | ||||| Sbjct 749 GCACTATCTCTATCGAGCAATCGATGCGGATGGGCTCACGTTGGATATCTGGCTACGTAA 690 Query 127311 GCAACGAGATAATCATTCAGCATATGCGTTTATTAAACGTCTCATTAAACAATTTGGTAA 127370 | ||||||| || |||| || || ||| | ||||| | | ||||| |||| | | Sbjct 689 AAAGCGAGATACACAAGCAGCTTACGCCTTTCTCAAACGATTGGTAAAACAGTTTGATGA 630 Query 127371 ACCTCAAAAGG---TAATTACAGATCAGGCACCTTC 127403 ||| ||||| || | || ||| | |||||||| Sbjct 629 ACC---AAAGGTTCTAGTAACTGATAAAGCACCTTC 597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408575243962550