Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq429 163 7e-35 seq830 147 5e-30 seq1314 143 6e-29 >seq429 Length=41586 Score = 163 bits (180), Expect = 7e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| | |||||| || || |||||||| || |||| || || | |||||| Sbjct 1125 AGGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTACGTCCATCC 1184 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || ||||||||||| ||||| || || || |||| ||| |||||||| Sbjct 1185 TCGAGTTGCTTACCGGCGAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCCTTGTCT 1244 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || |||||||| || || || ||||| || ||||| ||| Sbjct 1245 TGGATCTTGGCCTTCACATTCTCGATGGTATCGGAAGGCTCGACCTCAAGGGTGATGGTC 1304 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| | ||| ||||| || | ||||||||| Sbjct 1305 TTACCCGTCAAAGTTTTTACGAAAATCTGCATTTT 1339 >seq830 Length=194395 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| || || || || |||||||| || || | || || || |||||||||| || Sbjct 122636 GTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTGCCATCTTCCAATTG 122695 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 |||||| || || || | || || || || || |||| ||||||||| |||||||| || Sbjct 122696 CTTGCCAGCAAAAATCAAACGCTGCTGATCTGGTGGAATTCCTTCCTTATCCTGGATTTT 122755 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| ||||| ||||| || ||||| ||| ||||| | |||||| ||||||||||| Sbjct 122756 GGCTTTAACGTTCTCGATTGTATCAGACGGTTCCACCTCCAAAGTGATAGTCTTTCCCGT 122815 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | ||| ||||| || | |||||| Sbjct 122816 CAAAGTTTTTACGAAGATCTGCAT 122839 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| ||||| || ||||| ||||| || |||| || ||||| |||||||||| ||| Sbjct 124479 TGAAGGGTGGATTCCTTTTGAATGTTGTAGTCCGACAGAGTCCTGCCATCTTCCAATTGC 124538 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || |||||||| | |||||||| || || || | |||||||||||| ||||| || Sbjct 124539 TTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTG 124598 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || ||||| || |||||||| |||||| || | || || || ||||| || Sbjct 124599 GCTTTGACATTTTCAATTGTGTCAGATGGTTCAACTTCCAAGGTAATGGTTTTTCCAGTC 124658 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | || || ||||| | |||||| Sbjct 124659 AAGGTTTTAACAAAGATCTGCAT 124681 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| || || || ||||||||||| || |||| || ||||| |||||||||| || Sbjct 124707 TGAAGTGTAGATTCCTTTTGGATGTTGTAGTCCGACAGAGTCCTGCCATCTTCCAATTGT 124766 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || |||||||| | ||||| || ||||| || | ||| || ||||| || ||||| Sbjct 124767 TTACCAGCGAAGATCAAACGTTGCTGATCAGGTGGGATTCCCTCTTTGTCTTGAATCTTA 124826 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||||| ||||| ||||| |||||| |||||||| | |||||| || || || || Sbjct 124827 GCCTTCACATTTTCAATGGTATCAGAGGGCTCAACCTCCAAAGTGATGGTTTTACCAGTT 124886 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | || || ||||| | |||||| Sbjct 124887 AAGGTTTTCACAAAGATCTGCAT 124909 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| || || || ||||||||||| || || | || ||||| |||||||||| || Sbjct 124023 TGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGACAGAGTCCTGCCATCTTCCAATTGT 124082 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || |||||||| | ||||| || || ||||| | |||||||||||| ||||| || Sbjct 124083 TTACCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCCTTGTCTTGGATTTTG 124142 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || |||||||| || |||||||| |||||| || | ||| || || ||||| || Sbjct 124143 GCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCCAAAGTAATGGTTTTTCCAGTC 124202 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | || || || || | |||||| Sbjct 124203 AATGTTTTAACGAAGATCTGCAT 124225 Score = 132 bits (146), Expect = 1e-25 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| || | || || || || || |||||||| || || ||||||||||||| | || Sbjct 122846 ACGCAGACGTAACACTAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCCGACAAAGT 122905 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || ||||| |||| ||||| || || || || | ||||| ||||| ||||||| || Sbjct 122906 TCTACCATCCTCCAATTGCTTACCCGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACC 122965 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| ||||| || || || || ||||| || || ||||| || || ||||| | Sbjct 122966 TTCTTTGTCTTGAATTTTAGCCTTTACGTTCTCAATTGTGTCCGATGGCTCCACCTCCAA 123025 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 |||||| ||||||||||| | ||| || || || | ||||||| Sbjct 123026 AGTGATAGTCTTTCCCGTCAAAGTTTTCACGAAAATCTGCATT 123068 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || |||||||| || || ||||| || ||||| | || ||||| |||||||||| || Sbjct 123549 TGGAGAGTGGATTCCTTCTGGATATTGTAATCAGACAGAGTCCTGCCATCTTCCAATTGT 123608 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || |||||||| | ||||| || || || || | |||||||||||| ||||| || Sbjct 123609 TTACCGGCGAAGATTAAACGTTGCTGATCTGGGGGGATTCCTTCCTTGTCTTGGATTTTA 123668 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || |||||||| || || || || |||||| || | |||||| || ||||| || Sbjct 123669 GCCTTGACGTTTTCAATTGTATCGGATGGTTCAACTTCCAAAGTGATAGTTTTTCCAGTC 123728 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | || || || || | |||||| Sbjct 123729 AAGGTTTTAACGAAGATCTGCAT 123751 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || ||||| || || || |||||||| || || | || ||||| |||||||||| || Sbjct 124251 TGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCATCTTCCAATTGT 124310 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || ||||| | ||||| || || ||||||| |||||||||||| ||||| || Sbjct 124311 TTACCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGGATTTTG 124370 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || |||||||| || |||||||| |||||| || | || || || ||||| || Sbjct 124371 GCCTTTACGTTTTCAATTGTGTCAGATGGTTCAACTTCCAAGGTAATAGTTTTTCCAGTC 124430 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | || || || || | |||||| Sbjct 124431 AAGGTTTTAACGAAGATCTGCAT 124453 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || |||||||| || || |||||||| || || | || ||||| |||||||||| ||| Sbjct 123321 TGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGAGTCCTGCCATCTTCCAACTGT 123380 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || || || | ||||| || || || || | ||||||||||| || ||||| Sbjct 123381 TTACCGGCAAAAATCAAACGTTGCTGATCTGGGGGGATCCCTTCCTTGTCTTGAATCTTA 123440 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || || ||||| || |||||||| |||||||| | |||||| || || || || Sbjct 123441 GCCTTGACATTTTCAATAGTGTCAGAAGGCTCAACCTCCAAAGTGATGGTTTTACCAGTT 123500 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | || || ||||| | |||||| Sbjct 123501 AAGGTTTTCACAAAAATCTGCAT 123523 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || |||||||| || ||||| | | |||||| ||||| |||| ||| || ||| Sbjct 123099 GTAGATTCCTTTTGGATATTGTAATCAGACAAGGTCCTGCCATCCTCCAACTGTTTACCT 123158 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | ||||| || || ||||||| ||||||||||| || || || || Sbjct 123159 GCGAAGATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTGGCCTTA 123218 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| || || || || || |||||| || | ||||| || ||||| || | || Sbjct 123219 ACGTTCTCAATTGTATCGGATGGTTCAACTTCTAAGGTGATGGTTTTTCCAGTCAAGGTT 123278 Query 211098 TTTACAAACACCTGCAT 211114 |||||||| | ||||| Sbjct 123279 TTTACAAAAATTTGCAT 123295 Score = 107 bits (118), Expect = 4e-18 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 210931 GGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGC 210990 |||| || ||||| | || ||||| |||||||||| || || || |||||||| | | Sbjct 123814 GGATATTGTAATCAGACAGAGTCCTGCCATCTTCCAATTGTTTTCCGGCGAAGATTAAAC 123873 Query 210991 GTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGG 211050 |||| || || || || | |||||||||||| ||||| || || ||||| || || | Sbjct 123874 GTTGCTGATCTGGGGGGATTCCTTCCTTGTCTTGGATTTTGGCCTTAACGTTCTCAATTG 123933 Query 211051 TGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCT 211110 | || || |||||| || | |||||| || ||||| || | || || || || | || Sbjct 123934 TATCGGATGGTTCAACTTCTAAAGTGATGGTTTTTCCAGTCAATGTTTTAACGAAGATCT 123993 Query 211111 GCAT 211114 |||| Sbjct 123994 GCAT 123997 >seq1314 Length=49468 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || ||||| || |||||||| || || | ||||| | |||||| || ||||| Sbjct 22031 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCATCCTCGAGCTG 22090 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || |||||||| | ||||| || || || || | ||| || |||||||||||||| Sbjct 22091 CTTACCGGCGAAGATCAAACGTTGCTGATCTGGGGGGATTCCCTCTTTGTCCTGGATCTT 22150 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||||| |||||||| || || ||| || |||||||| ||||| ||||| ||||| Sbjct 22151 GGCCTTCACATTTTCGATAGTATCGGAGGGCTCGACCTCGAGGGTGATGGTCTTACCCGT 22210 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || || || || || | ||||| Sbjct 22211 TAGGGTTTTCACGAAAATTTGCAT 22234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159082939897250