Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq429 167 6e-36 seq830 140 8e-28 >seq429 Length=41586 Score = 167 bits (184), Expect = 6e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| | ||||||||| || |||| ||||| || | || ||| | ||||| Sbjct 1125 AGGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTACGTCCATCC 1184 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || ||||||||||| ||||| || || || ||||| || ||||||||| Sbjct 1185 TCGAGTTGCTTACCGGCGAAGATAAGACGTTGCTGATCTGGGGGAATTCCCTCCTTGTCT 1244 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| |||||||| || || | || || || | ||||| ||| Sbjct 1245 TGGATCTTGGCCTTCACATTCTCGATGGTATCGGAAGGCTCGACCTCAAGGGTGATGGTC 1304 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || |||||||||||||||| ||| | |||||||| Sbjct 1305 TTACCCGTCAAAGTTTTTACGAAAATCTGCATTTT 1339 >seq830 Length=194395 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | |||||||||||||| || |||| ||||||||| | || ||| Sbjct 123530 ACGAAGACGCAATACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAATCAGACAGAGT 123589 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| | || || || |||||||| | ||||| || || || || || || Sbjct 123590 CCTGCCATCTTCCAATTGTTTACCGGCGAAGATTAAACGTTGCTGATCTGGGGGGATTCC 123649 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||| || ||| || ||| || || || || | ||| || || || Sbjct 123650 TTCCTTGTCTTGGATTTTAGCCTTGACGTTTTCAATTGTATCGGATGGTTCAACTTCCAA 123709 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || ||||| ||||| | ||| | ||||| Sbjct 123710 AGTGATAGTTTTTCCAGTCAAGGTTTTAACGAAGATCTGCAT 123751 Score = 138 bits (152), Expect = 3e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| || || ||||| || |||| ||||| || | || |||||| |||||||| | || Sbjct 122636 GTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTGCCATCTTCCAATTG 122695 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| ||||| || || | || || || || || ||||| |||||||| || ||||| || Sbjct 122696 CTTGCCAGCAAAAATCAAACGCTGCTGATCTGGTGGAATTCCTTCCTTATCCTGGAT-TT 122754 Query 225630 TTGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCG 225688 | |||| | | | ||||| || || || | |||||| || || ||||| ||||| |||| Sbjct 122755 TGGCTTTAACGTTCTCGATTGTATCAGACGGTTCCACCTCCAAAGTGATAGTCTTTCCCG 122814 Query 225689 TCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||| ||| | ||||| Sbjct 122815 TCAAAGTTTTTACGAAGATCTGCAT 122839 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564 || || ||||| ||||| || || || | || ||||| | ||||||||| ||||| || Sbjct 122859 ACTAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCCGACAAAGTTCTACCATCCTCC 122918 Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624 | ||||| || || || || | ||||| ||||| || ||||||||||| |||||||| Sbjct 122919 AATTGCTTACCCGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTCTTGA 122978 Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684 || || ||| || || || ||||| || | ||||| || || ||||| ||||| Sbjct 122979 ATTTTAGCCTTTACGTTCTCAATTGTGTCCGATGGCTCCACCTCCAAAGTGATAGTCTTT 123038 Query 225685 CCCGTCAAAGTTTTTATGAACACTTGCATT 225714 |||||||||||||| | ||| | |||||| Sbjct 123039 CCCGTCAAAGTTTTCACGAAAATCTGCATT 123068 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||| ||||||| ||||||||| | ||| || || ||||| || | ||| || || Sbjct 123099 GTAGATTCCTTTTGGATATTGTAATCAGACAAGGTCCTGCCATCCTCCAACTGTTTACCT 123158 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | ||||| || || || |||||||||||||||||||| || || ||| Sbjct 123159 GCGAAGATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTGGCCTTA 123218 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || || || || || || | ||| || ||||| ||||| || || || ||||| ||| Sbjct 123219 ACGTTCTCAATTGTATCGGATGGTTCAACTTCTAAGGTGATGGTTTTTCCAGTCAAGGTT 123278 Query 225697 TTTATGAACACTTGCAT 225713 |||| || | |||||| Sbjct 123279 TTTACAAAAATTTGCAT 123295 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | |||||||| ||||| || |||| ||||| |||| || ||| Sbjct 124232 ACGAAGACGCAATACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGACAGAGT 124291 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| | || || ||||| ||||| | ||||| || || || ||||| || Sbjct 124292 CCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCC 124351 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||| || ||| || ||| || ||||| || | ||| || || || Sbjct 124352 TTCCTTGTCTTGGATTTTGGCCTTTACGTTTTCAATTGTGTCAGATGGTTCAACTTCCAA 124411 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || ||||| ||||| | ||| | ||||| Sbjct 124412 GGTAATAGTTTTTCCAGTCAAGGTTTTAACGAAGATCTGCAT 124453 Score = 132 bits (146), Expect = 1e-25 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || | || || |||||||| ||||| | ||||| || | || ||| Sbjct 124461 CGAAGACGCAATACCAAATGAAGGGTGGATTCCTTTTGAATGTTGTAGTCCGACAGAGTC 124520 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || |||||||| | ||||| ||||||||||| | |||||||| || || || || ||| Sbjct 124521 CTGCCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCT 124580 Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||| ||| || || ||| ||| || ||||| || | ||| || || || Sbjct 124581 TCCTTGTCTTGGAT-TTTGGCTTTGACATTTTCAATTGTGTCAGATGGTTCAACTTCCAA 124639 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 || || || || || ||||| ||||| Sbjct 124640 GGTAATGGTTTTTCCAGTCAAGGTTTT 124666 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || || || ||||| ||||||| ||||| || | || ||| Sbjct 124004 ACGAAGACGCAATACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGACAGAGT 124063 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| | || || ||||||||||| | ||||| || || || || || || Sbjct 124064 CCTGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCC 124123 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||| || ||| || ||| || ||||| || | ||| || || || Sbjct 124124 TTCCTTGTCTTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCCAA 124183 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || ||||| ||||| | ||| | ||||| Sbjct 124184 AGTAATGGTTTTTCCAGTCAATGTTTTAACGAAGATCTGCAT 124225 Score = 122 bits (134), Expect = 2e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | |||||||||||||| || |||| ||||| || | || ||| Sbjct 123302 ACGAAGACGCAAAACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGAGT 123361 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| | ||| || || || || || | ||||| || || || || || || Sbjct 123362 CCTGCCATCTTCCAACTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGGGGGATCCC 123421 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||| ||||| ||| ||| ||| || ||||| || | || || || || Sbjct 123422 TTCCTTGTCTTGAATCTTAGCCTTGACATTTTCAATAGTGTCAGAAGGCTCAACCTCCAA 123481 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| || || || || || ||||| Sbjct 123482 AGTGATGGTTTTACCAGTTAAGGTTTT 123508 Score = 122 bits (134), Expect = 2e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || || || ||||| ||||||| ||||| || | || ||| Sbjct 124688 ACGAAGACGCAATACTAAATGAAGTGTAGATTCCTTTTGGATGTTGTAGTCCGACAGAGT 124747 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| | || || ||||||||||| | ||||| || || || || || || Sbjct 124748 CCTGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGTGGGATTCC 124807 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || |||||||| ||||| ||||||| ||| ||||| || |||| || || || || Sbjct 124808 CTCTTTGTCTTGAATCTTAGCCTTCACATTTTCAATGGTATCAGAGGGCTCAACCTCCAA 124867 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| || || || || || ||||| Sbjct 124868 AGTGATGGTTTTACCAGTTAAGGTTTT 124894 Score = 111 bits (122), Expect = 4e-19 Identities = 135/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 225530 GGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTC 225589 ||| ||||||||| | || ||| || |||||||| | || || || |||||||| | | Sbjct 123814 GGATATTGTAATCAGACAGAGTCCTGCCATCTTCCAATTGTTTTCCGGCGAAGATTAAAC 123873 Query 225590 GTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGG 225649 |||| || || || || || ||||||||||||||||| || ||| || || || | Sbjct 123874 GTTGCTGATCTGGGGGGATTCCTTCCTTGTCTTGGATTTTGGCCTTAACGTTCTCAATTG 123933 Query 225650 TGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTT 225709 | || || | ||| || ||||| ||||| || || || ||||| ||||| | ||| | | Sbjct 123934 TATCGGATGGTTCAACTTCTAAAGTGATGGTTTTTCCAGTCAATGTTTTAACGAAGATCT 123993 Query 225710 GCAT 225713 |||| Sbjct 123994 GCAT 123997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192460151227100