Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq4450 217 2e-51 >seq4450 Length=177458 Score = 217 bits (240), Expect = 2e-51 Identities = 400/579 (69%), Gaps = 8/579 (1%) Strand=Plus/Plus Query 23496 CTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATT 23555 |||||||| ||||| || || | || || | |||||||||| ||||| || || Sbjct 24300 CTTAAACATCAAACACGCGAATTTGCAGTGCATCGCTTCATCCCTGGAGATCAACTCGTT 24359 Query 23556 AGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGA 23615 || || || | || ||||| |||||| || || | ||| || || | || || Sbjct 24360 GGAGAAAGTGAGACCGGGCATCAATCCTTTCTTCTTCAGCCAGAAGATCGAGGCGAAACT 24419 Query 23616 TCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGC 23675 ||||| |||||||||||||| || || ||||| || || | | | ||| ||||| || Sbjct 24420 GCCGGAGAAGAAAATACCCTCCACTGCTGCAAAAGCGACGACCCTTTCACCGAATGTCGC 24479 Query 23676 ATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGT 23735 | | | |||||||| ||| | ||||| ||||||| ||| || || ||| || Sbjct 24480 TTCTTGACTGGAAATCCAATTTAACGCCCAATCAGCCTTCTTTTTCACGCATGGAATAGT 24539 Query 23736 TTCAATTGCTTTTAAGAGAAAAGTTTT-TTCTTCATTATCTGTTATATATGTATCAATTA 23794 ||||||||| || | |||||| |||| | ||||| |||| | ||||| || || || | Sbjct 24540 TTCAATTGCATTAAGAAGAAAACTTTTCTCCTTCA-CATCTTTGATATAAGTGTCTATCA 24598 Query 23795 GTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATC 23854 ||||| ||||| || || || || || || |||||||| | ||||| || || Sbjct 24599 ACAAACTGTACATCAGTGAGTGTATGTTCTCCATGGCAATCTGCATGCCATAGAAGAATT 24658 Query 23855 TAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATAC 23914 | || ||| | ||| || || ||| ||||| | | | ||||| || ||||||| Sbjct 24659 TTGCCTCAATAACTTGTACTTCTTTACTGAATCTCTCTACCAGGTTTTCATTGACAATAC 24718 Query 23915 CATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGA-- 23972 ||||| |||||||| || || | ||||| || || ||||| |||| ||| |||| Sbjct 24719 CATCAGAGGCAGCAAAAAATGCCAACACATACTTGATGAAATG--TTTC-TCATTTGAAG 24775 Query 23973 TAATTTTTT-CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAAC 24031 | ||||||| |||||| || || || || ||||||||||||| ||| ||||||| Sbjct 24776 TCATTTTTTCCCAATCTTTGTAGTCCTTCGACAAATCAACTTCATGAACCTTCCAAAATG 24835 Query 24032 TTGCCAAGGCACGCTTATACATTAGCCAAATATCATTAT 24070 ||| || | | |||||| ||| || ||||||| Sbjct 24836 AGGCCTCAGCTTGTTCATACATCTTCCACATGTCATTAT 24874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521457688510000