Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq490 105 1e-17
seq649 102 2e-16
seq1864 98.7 2e-15
seq8016 89.7 1e-12
seq1372 89.7 1e-12
seq1242 89.7 1e-12
seq1179 89.7 1e-12
seq959 89.7 1e-12
seq815 89.7 1e-12
seq597 89.7 1e-12
seq579 89.7 1e-12
seq36 89.7 1e-12
seq294 86.0 1e-11
seq928 84.2 5e-11
>seq490
Length=515312
Score = 105 bits (116), Expect = 1e-17
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 281719 GTCGCGTCTTAGGGTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCAC 281778
||||||| || || || | |||||||| || | || ||| ||| ||| || || |
Sbjct 446751 GTCGCGTGAGCGGATTGAGCATGGTGAAGATGTAACGTGGACTTGCGGCGTCCTTGCCGC 446810
Query 281779 CCTGCAGCCTCGACCCAAACTGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGA 281838
||||||| | || || |||||||| |||| |||| ||| ||||| ||||| || |
Sbjct 446811 CCTGCAGTCGCGTGCCGAACTGACCGAGCGGCTGCAACAGGTTGATGTTGTTGCTGCCCA 446870
Query 281839 CGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGG 281898
|||| | || |||||||||| ||| ||| | || || |||||||||||||| ||||
Sbjct 446871 CGTAGTTTTGCGCCAGGTTGATGATGGTCGACATCAGTGACACCTCACCGTGGTGGTAGG 446930
Query 281899 C 281899
|
Sbjct 446931 C 446931
>seq649
Length=437485
Score = 102 bits (112), Expect = 2e-16
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 281719 GTCGCGTCTTAGGGTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCAC 281778
||||||| || || || | |||||||| || | | ||| ||| ||| || || |
Sbjct 394682 GTCGCGTGAGCGGATTGAGCATGGTGAAGATGTAACGCGGACTTGCGGCGTCCTTGCCGC 394623
Query 281779 CCTGCAGCCTCGACCCAAACTGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGA 281838
||||||| | || || |||||||| |||| |||| ||| ||||| ||||| || |
Sbjct 394622 CCTGCAGTCGCGTGCCGAACTGACCGAGCGGCTGCAACAGGTTGATGTTGTTGCTGCCCA 394563
Query 281839 CGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGG 281898
|||| | || |||||||||| ||| ||| | || || |||||||||||||| ||||
Sbjct 394562 CGTAGTTTTGCGCCAGGTTGATGATGGTCGACATCAGTGACACCTCACCGTGGTGGTAGG 394503
Query 281899 C 281899
|
Sbjct 394502 C 394502
>seq1864
Length=188450
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 281721 CGCGTCTTAGGGTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCC 281780
||||| ||| || || | |||||||| || | | ||| ||| ||| || || |||
Sbjct 142237 CGCGTGAGAGGATTGAGCATGGTGAAGATGTAACGCGGACTTGCGGCGTCCTTGCCGCCC 142296
Query 281781 TGCAGCCTCGACCCAAACTGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACG 281840
|||| | || || |||||||| |||| |||| ||| ||||| ||||| || ||
Sbjct 142297 TGCAATCGCGTGCCGAACTGACCGAGCGGCTGCAACAGGTTGATGTTGTTGCTGCCCACA 142356
Query 281841 TAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGC 281899
|| | ||| |||||||||| ||| ||| | || || |||||||||||||| |||||
Sbjct 142357 TAGTTCTGCGCCAGGTTGATGATGGTCGACATCAGTGACACCTCACCGTGGTGGTAGGC 142415
>seq8016
Length=6059
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 1616 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1557
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 1556 CCCACGTTGGGC 1545
>seq1372
Length=260938
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 99256 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 99315
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 99316 CCCACGTTGGGC 99327
>seq1242
Length=282053
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 102484 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 102425
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 102424 CCCACGTTGGGC 102413
>seq1179
Length=294614
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 74903 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 74962
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 74963 CCCACGTTGGGC 74974
>seq959
Length=348071
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 63138 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 63079
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 63078 CCCACGTTGGGC 63067
>seq815
Length=383258
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 38664 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 38723
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 38724 CCCACGTTGGGC 38735
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 40842 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 40901
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 40902 CCCACGTTGGGC 40913
>seq597
Length=463389
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 140060 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 140119
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 140120 CCCACGTTGGGC 140131
>seq579
Length=471131
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 333093 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 333152
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 333153 CCCACGTTGGGC 333164
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 335493 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 335552
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 335553 CCCACGTTGGGC 335564
>seq36
Length=1199454
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 517912 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 517971
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 517972 CCCACGTTGGGC 517983
>seq294
Length=663226
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| |||||||| |||||||
Sbjct 366023 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGTTTCGAGC 365964
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 365963 CCCACGTTGGGC 365952
>seq928
Length=356597
Score = 84.2 bits (92), Expect = 5e-11
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG- 165768
||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 201226 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 201167
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 201166 CCCCACGTTGGGC 201154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057192982199540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |