Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_000929.1
Length=36717
Score E
Sequences producing significant alignments: (Bits) Value
seq1173 107 4e-19
>seq1173
Length=295699
Score = 107 bits (118), Expect = 4e-19
Identities = 245/364 (67%), Gaps = 6/364 (2%)
Strand=Plus/Minus
Query 35164 GCAGGATGTGAACAAATATTTGAAGATAAATTAAGCGGAACAAGGACAGACCGACCGGGA 35223
||||| || ||| |||| | |||||||||| | | || | | || || || || ||
Sbjct 93688 GCAGGGTGCGAAAAAATTTATGAAGATAAAATCAATGGTGTACGAACTGAACGCCCAGGG 93629
Query 35224 TTAAAACG--CGCTTTAAAGCGCCTTCAAAAAGGTGACACACTGGTTGTCTGGAAACTGG 35281
|||| | | || ||| |||| | | || || || |||||||| |||||||| |
Sbjct 93628 TTAACCAGAACACTGGAAATG--CTTCGAGAGGGCGATACGCTGGTTGTATGGAAACTCG 93571
Query 35282 ATCGCCTCGGGCGAAGCATGAAACATTTGATTTCTCTCGTAGGGGAATTACGAGAGCGAG 35341
|||| || || || ||| | ||||| | || | ||| || || | | | | |
Sbjct 93570 ATCGTCTGGGTCGTAGCGTAAAACAGCTTGTTGATATCGCTGGAGAGCTGCACAAACAGG 93511
Query 35342 GGATTAATTTTCGCAGTCTTACTGACAGTATTGATACGTCATCTCCAATGGGGCGTTTTT 35401
| ||| | || ||||| || || ||||||||| | | || |||||||||||
Sbjct 93510 GCATTCAGTTCAAAAGTCTCACGGATGCTATTGATACCGGAACACCGTCGGGGCGTTTTT 93451
Query 35402 TCTTCCACGTTATGGGTGCCCTGGCTGAAATGGAACGAGAACTAATTATCGAGCGAACGA 35461
||||||| ||||||| | ||| || |||||||| ||||| | || ||||| || |||
Sbjct 93450 TCTTCCATGTTATGGCTAGCCTTGCAGAAATGGAGCGAGAGTTGATAATCGAACGTACGC 93391
Query 35462 TGGCTGGACTTGCTGCCGC-CAGAAATAAAGGCCGTATTGGTGGGCGACCACCTAAACTA 35520
||| || |||| | | || || ||| || |||| |||||| || ||| ||| |
Sbjct 93390 GGGCAGGTCTTGATTCAGCAAAGGAAT-TCGGGCGTAAAGGTGGGAGAAAACCAAAAATG 93332
Query 35521 ACCA 35524
||||
Sbjct 93331 ACCA 93328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117307907366484
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |