Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_000929.1 Length=36717 Score E Sequences producing significant alignments: (Bits) Value seq1173 107 4e-19 >seq1173 Length=295699 Score = 107 bits (118), Expect = 4e-19 Identities = 245/364 (67%), Gaps = 6/364 (2%) Strand=Plus/Minus Query 35164 GCAGGATGTGAACAAATATTTGAAGATAAATTAAGCGGAACAAGGACAGACCGACCGGGA 35223 ||||| || ||| |||| | |||||||||| | | || | | || || || || || Sbjct 93688 GCAGGGTGCGAAAAAATTTATGAAGATAAAATCAATGGTGTACGAACTGAACGCCCAGGG 93629 Query 35224 TTAAAACG--CGCTTTAAAGCGCCTTCAAAAAGGTGACACACTGGTTGTCTGGAAACTGG 35281 |||| | | || ||| |||| | | || || || |||||||| |||||||| | Sbjct 93628 TTAACCAGAACACTGGAAATG--CTTCGAGAGGGCGATACGCTGGTTGTATGGAAACTCG 93571 Query 35282 ATCGCCTCGGGCGAAGCATGAAACATTTGATTTCTCTCGTAGGGGAATTACGAGAGCGAG 35341 |||| || || || ||| | ||||| | || | ||| || || | | | | | Sbjct 93570 ATCGTCTGGGTCGTAGCGTAAAACAGCTTGTTGATATCGCTGGAGAGCTGCACAAACAGG 93511 Query 35342 GGATTAATTTTCGCAGTCTTACTGACAGTATTGATACGTCATCTCCAATGGGGCGTTTTT 35401 | ||| | || ||||| || || ||||||||| | | || ||||||||||| Sbjct 93510 GCATTCAGTTCAAAAGTCTCACGGATGCTATTGATACCGGAACACCGTCGGGGCGTTTTT 93451 Query 35402 TCTTCCACGTTATGGGTGCCCTGGCTGAAATGGAACGAGAACTAATTATCGAGCGAACGA 35461 ||||||| ||||||| | ||| || |||||||| ||||| | || ||||| || ||| Sbjct 93450 TCTTCCATGTTATGGCTAGCCTTGCAGAAATGGAGCGAGAGTTGATAATCGAACGTACGC 93391 Query 35462 TGGCTGGACTTGCTGCCGC-CAGAAATAAAGGCCGTATTGGTGGGCGACCACCTAAACTA 35520 ||| || |||| | | || || ||| || |||| |||||| || ||| ||| | Sbjct 93390 GGGCAGGTCTTGATTCAGCAAAGGAAT-TCGGGCGTAAAGGTGGGAGAAAACCAAAAATG 93332 Query 35521 ACCA 35524 |||| Sbjct 93331 ACCA 93328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117307907366484